RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 A1L4Q6 167 aa16.42■□□□□ 0.22
NECTIN1-202ENST00000340882 GOLGA8SH3BPF8 625 aa16.42■□□□□ 0.22
NECTIN1-202ENST00000340882 CACNB4O00305 520 aaPredicted RBP16.42■□□□□ 0.22
NECTIN1-202ENST00000340882 FOXN3O00409 490 aaPredicted RBP16.42■□□□□ 0.22
NECTIN1-202ENST00000340882 BUB1BO60566 1050 aaPredicted RBP16.42■□□□□ 0.22
NECTIN1-202ENST00000340882 RAMP2O60895 175 aa16.42■□□□□ 0.22
NECTIN1-202ENST00000340882 SEMA7AO75326 666 aa16.42■□□□□ 0.22
NECTIN1-202ENST00000340882 RECQL5O94762 991 aaPredicted RBP16.42■□□□□ 0.22
NECTIN1-202ENST00000340882 CCNB1P14635 433 aa16.42■□□□□ 0.22
NECTIN1-202ENST00000340882 ATP11AP98196 1134 aa16.42■□□□□ 0.22
NECTIN1-202ENST00000340882 PTK2Q05397 1052 aa16.42■□□□□ 0.22
NECTIN1-202ENST00000340882 TRA2AQ13595 282 aaKnown RBP eCLIP16.42■□□□□ 0.22
NECTIN1-202ENST00000340882 CYTH1Q15438 398 aa16.42■□□□□ 0.22
NECTIN1-202ENST00000340882 CAPRIN2Q6IMN6 1127 aaKnown RBP16.42■□□□□ 0.22
NECTIN1-202ENST00000340882 C16orf46Q6P387 395 aa16.42■□□□□ 0.22
NECTIN1-202ENST00000340882 FAM129CQ86XR2 697 aa16.42■□□□□ 0.22
NECTIN1-202ENST00000340882 NRSN1Q8IZ57 195 aa16.42■□□□□ 0.22
NECTIN1-202ENST00000340882 EMC1Q8N766 993 aa16.42■□□□□ 0.22
NECTIN1-202ENST00000340882 OR4D9Q8NGE8 314 aa16.42■□□□□ 0.22
NECTIN1-202ENST00000340882 C18orf8Q96DM3 657 aa16.42■□□□□ 0.22
NECTIN1-202ENST00000340882 RTP4Q96DX8 246 aa16.42■□□□□ 0.22
NECTIN1-202ENST00000340882 SUV39H2Q9H5I1 410 aa16.42■□□□□ 0.22
NECTIN1-202ENST00000340882 TAAR2Q9P1P5 351 aa16.42■□□□□ 0.22
NECTIN1-202ENST00000340882 APEX2Q9UBZ4 518 aa16.42■□□□□ 0.22
NECTIN1-202ENST00000340882 CTNND2Q9UQB3 1225 aa16.42■□□□□ 0.22
NECTIN1-202ENST00000340882 IGHV1OR21-1A0A087WYE8 117 aa16.41■□□□□ 0.22
NECTIN1-202ENST00000340882 TNFRSF10CO14798 259 aa16.41■□□□□ 0.22
NECTIN1-202ENST00000340882 CAPN5O15484 640 aaPredicted RBP16.41■□□□□ 0.22
NECTIN1-202ENST00000340882 LRIG2O94898 1065 aa16.41■□□□□ 0.22
NECTIN1-202ENST00000340882 SMC2O95347 1197 aa16.41■□□□□ 0.22
NECTIN1-202ENST00000340882 COL8A1P27658 744 aa16.41■□□□□ 0.22
NECTIN1-202ENST00000340882 CSTF2P33240 577 aaKnown RBP eCLIP16.41■□□□□ 0.22
NECTIN1-202ENST00000340882 ADRA1BP35368 520 aa16.41■□□□□ 0.22
NECTIN1-202ENST00000340882 TRIM23P36406 574 aa16.41■□□□□ 0.22
NECTIN1-202ENST00000340882 SCNN1AP37088 669 aa16.41■□□□□ 0.22
NECTIN1-202ENST00000340882 SUOXP51687 545 aa16.41■□□□□ 0.22
NECTIN1-202ENST00000340882 SNX16P57768 344 aa16.41■□□□□ 0.22
NECTIN1-202ENST00000340882 NRG1Q02297 640 aaPredicted RBP16.41■□□□□ 0.22
NECTIN1-202ENST00000340882 STIM1Q13586 685 aa16.41■□□□□ 0.22
NECTIN1-202ENST00000340882 CLPPQ16740 277 aaPredicted RBP16.41■□□□□ 0.22
NECTIN1-202ENST00000340882 C15orf59Q2T9L4 293 aaPredicted RBP16.41■□□□□ 0.22
NECTIN1-202ENST00000340882 DCAF12Q5T6F0 453 aa16.41■□□□□ 0.22
NECTIN1-202ENST00000340882 ZNF787Q6DD87 383 aa16.41■□□□□ 0.22
NECTIN1-202ENST00000340882 PHLDB2Q86SQ0 1253 aa16.41■□□□□ 0.22
NECTIN1-202ENST00000340882 NLGN4XQ8N0W4 816 aa16.41■□□□□ 0.22
NECTIN1-202ENST00000340882 NAGSQ8N159 534 aa16.41■□□□□ 0.22
NECTIN1-202ENST00000340882 NLGN4YQ8NFZ3 816 aaPredicted RBP16.41■□□□□ 0.22
NECTIN1-202ENST00000340882 KIAA1524Q8TCG1 905 aa16.41■□□□□ 0.22
NECTIN1-202ENST00000340882 STARD8Q92502 1023 aa16.41■□□□□ 0.22
NECTIN1-202ENST00000340882 RNF31Q96EP0 1072 aa16.41■□□□□ 0.22
NECTIN1-202ENST00000340882 ASPSCR1Q9BZE9 553 aa16.41■□□□□ 0.22
NECTIN1-202ENST00000340882 APMAPQ9HDC9 416 aa16.41■□□□□ 0.22
NECTIN1-202ENST00000340882 SIX2Q9NPC8 291 aa16.41■□□□□ 0.22
NECTIN1-202ENST00000340882 HIVEP3Q5T1R4 2406 aa16.41■□□□□ 0.22
NECTIN1-202ENST00000340882 B4E171 279 aa16.4■□□□□ 0.22
NECTIN1-202ENST00000340882 HOXC4P09017 264 aaPredicted RBP16.4■□□□□ 0.22
NECTIN1-202ENST00000340882 F8A1P23610 371 aa16.4■□□□□ 0.22
NECTIN1-202ENST00000340882 CDH5P33151 784 aaPredicted RBP16.4■□□□□ 0.22
NECTIN1-202ENST00000340882 TSPAN7P41732 249 aa16.4■□□□□ 0.22
NECTIN1-202ENST00000340882 CDO1Q16878 200 aa16.4■□□□□ 0.22
NECTIN1-202ENST00000340882 FHL5Q5TD97 284 aa16.4■□□□□ 0.22
NECTIN1-202ENST00000340882 LIPIQ6XZB0 460 aa16.4■□□□□ 0.22
NECTIN1-202ENST00000340882 ZNF761Q86XN6 746 aaPredicted RBP16.4■□□□□ 0.22
NECTIN1-202ENST00000340882 ZNF354CQ86Y25 554 aa16.4■□□□□ 0.22
NECTIN1-202ENST00000340882 CAMK1DQ8IU85 385 aa16.4■□□□□ 0.22
NECTIN1-202ENST00000340882 CCDC112Q8NEF3 446 aa16.4■□□□□ 0.22
NECTIN1-202ENST00000340882 HCAR2Q8TDS4 363 aa16.4■□□□□ 0.22
NECTIN1-202ENST00000340882 CCDC34Q96HJ3 373 aa16.4■□□□□ 0.22
NECTIN1-202ENST00000340882 NCAPGQ9BPX3 1015 aa16.4■□□□□ 0.22
NECTIN1-202ENST00000340882 CARS2Q9HA77 564 aaKnown RBP16.4■□□□□ 0.22
NECTIN1-202ENST00000340882 ATP8A1Q9Y2Q0 1164 aa16.4■□□□□ 0.22
NECTIN1-202ENST00000340882 KCNMB2Q9Y691 235 aa16.4■□□□□ 0.22
NECTIN1-202ENST00000340882 PRRC2CQ9Y520 2896 aaKnown RBP16.4■□□□□ 0.22
NECTIN1-202ENST00000340882 ABCA12Q86UK0 2595 aa16.39■□□□□ 0.22
NECTIN1-202ENST00000340882 TEX33O43247 280 aa16.39■□□□□ 0.21
NECTIN1-202ENST00000340882 PDGFAP04085 211 aa16.39■□□□□ 0.21
NECTIN1-202ENST00000340882 FURINP09958 794 aa16.39■□□□□ 0.21
NECTIN1-202ENST00000340882 PON1P27169 355 aa16.39■□□□□ 0.21
NECTIN1-202ENST00000340882 MAP4P27816 1152 aaKnown RBP16.39■□□□□ 0.21
NECTIN1-202ENST00000340882 STAT1P42224 750 aa16.39■□□□□ 0.21
NECTIN1-202ENST00000340882 GPR3P46089 330 aa16.39■□□□□ 0.21
NECTIN1-202ENST00000340882 RGRP47804 291 aa16.39■□□□□ 0.21
NECTIN1-202ENST00000340882 SQSTM1Q13501 440 aa16.39■□□□□ 0.21
NECTIN1-202ENST00000340882 INO80DQ53TQ3 878 aaPredicted RBP16.39■□□□□ 0.21
NECTIN1-202ENST00000340882 ERAP2Q6P179 960 aa16.39■□□□□ 0.21
NECTIN1-202ENST00000340882 SLC30A9Q6PML9 568 aa16.39■□□□□ 0.21
NECTIN1-202ENST00000340882 CCDC185Q8N715 623 aa16.39■□□□□ 0.21
NECTIN1-202ENST00000340882 TEX19Q8NA77 164 aa16.39■□□□□ 0.21
NECTIN1-202ENST00000340882 SSC4DQ8WTU2 575 aa16.39■□□□□ 0.21
NECTIN1-202ENST00000340882 KIAA1143Q96AT1 154 aaPredicted RBP16.39■□□□□ 0.21
NECTIN1-202ENST00000340882 TBC1D31Q96DN5 1066 aa16.39■□□□□ 0.21
NECTIN1-202ENST00000340882 PLEKHM1Q9Y4G2 1056 aa16.39■□□□□ 0.21
NECTIN1-202ENST00000340882 CSMD1Q96PZ7 3565 aa16.38■□□□□ 0.21
NECTIN1-202ENST00000340882 ZSCAN5CA6NGD5 496 aaPredicted RBP16.38■□□□□ 0.21
NECTIN1-202ENST00000340882 A8MU76 341 aa16.38■□□□□ 0.21
NECTIN1-202ENST00000340882 A8MX80 341 aa16.38■□□□□ 0.21
NECTIN1-202ENST00000340882 GNA14O95837 355 aa16.38■□□□□ 0.21
NECTIN1-202ENST00000340882 CEACAM5P06731 702 aa16.38■□□□□ 0.21
NECTIN1-202ENST00000340882 PLEKP08567 350 aaPredicted RBP16.38■□□□□ 0.21
NECTIN1-202ENST00000340882 TCN2P20062 427 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms