RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 SPDL1Q96EA4 605 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 ZSWIM3Q96MP5 696 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 SH3GL2Q99962 352 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 TCAF1Q9Y4C2 921 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 LOC100653049A0A140TA62 436 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 FAM95CA0A1B0GW59 222 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 SUPT3HB4E1H0 165 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 SUPT3HO75486 399 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 KRT34O76011 436 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 F7P08709 466 aaPredicted RBP11.78□□□□□ -0.52
C2orf88-201ENST00000340623 SCTRP47872 440 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 ALDH18A1P54886 795 aaKnown RBP11.78□□□□□ -0.52
C2orf88-201ENST00000340623 GRTP1Q5TC63 336 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 PARP9Q8IXQ6 854 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 PSKH2Q96QS6 385 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 OSGEPL1Q9H4B0 414 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 MTG2Q9H4K7 406 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 SUV39H2Q9H5I1 410 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 CYP4F12Q9HCS2 524 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 SUN2Q9UH99 717 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 CD84Q9UIB8 345 aa11.78□□□□□ -0.52
C2orf88-201ENST00000340623 TDRD15B5MCY1 1934 aaKnown RBP11.78□□□□□ -0.52
C2orf88-201ENST00000340623 TRIM24O15164 1050 aa11.77□□□□□ -0.52
C2orf88-201ENST00000340623 INPP4BO15327 924 aa11.77□□□□□ -0.52
C2orf88-201ENST00000340623 ZDHHC11BP0C7U3 371 aa11.77□□□□□ -0.52
C2orf88-201ENST00000340623 RPA3P35244 121 aaPredicted RBP11.77□□□□□ -0.52
C2orf88-201ENST00000340623 ZNF33AQ06730 810 aa11.77□□□□□ -0.52
C2orf88-201ENST00000340623 PTPRNQ16849 979 aa11.77□□□□□ -0.52
C2orf88-201ENST00000340623 MUM1Q2TAK8 710 aa11.77□□□□□ -0.52
C2orf88-201ENST00000340623 TTLL9Q3SXZ7 439 aa11.77□□□□□ -0.52
C2orf88-201ENST00000340623 RAET1GQ6H3X3 334 aa11.77□□□□□ -0.52
C2orf88-201ENST00000340623 TANGO2Q6ICL3 276 aa11.77□□□□□ -0.52
C2orf88-201ENST00000340623 OLFM3Q96PB7 478 aa11.77□□□□□ -0.52
C2orf88-201ENST00000340623 EIF2B3Q9NR50 452 aaKnown RBP11.77□□□□□ -0.52
C2orf88-201ENST00000340623 ETAA1Q9NY74 926 aa11.77□□□□□ -0.52
C2orf88-201ENST00000340623 ARL5AQ9Y689 179 aa11.77□□□□□ -0.52
C2orf88-201ENST00000340623 TBC1D3DA0A087WVF3 549 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 TBC1D3IA0A087WXS9 549 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 TBC1D3EA0A087X179 549 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 TBC1D3KA0A087X1G2 549 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 TBC1D3FA6NER0 549 aaPredicted RBP11.77□□□□□ -0.53
C2orf88-201ENST00000340623 NCF1BA6NI72 391 aaPredicted RBP11.77□□□□□ -0.53
C2orf88-201ENST00000340623 NCF1CA8MVU1 366 aaPredicted RBP11.77□□□□□ -0.53
C2orf88-201ENST00000340623 TBC1D3LB9A6J9 549 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 ARHGEF15O94989 841 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 ABHD2P08910 425 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 NUDT17P0C025 328 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 HIST1H2AGP0C0S8 130 aaPredicted RBP11.77□□□□□ -0.53
C2orf88-201ENST00000340623 TBC1D3HP0C7X1 549 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 NCF1P14598 390 aaPredicted RBP11.77□□□□□ -0.53
C2orf88-201ENST00000340623 HIST1H2ADP20671 130 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 HOXA9P31269 272 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 ATXN3P54252 364 aaPredicted RBP11.77□□□□□ -0.53
C2orf88-201ENST00000340623 SLC1A5Q15758 541 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 SIRPB2Q5JXA9 342 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 SNX30Q5VWJ9 437 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 TBC1D3GQ6DHY5 549 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 TBC1D3CQ6IPX1 549 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 ANKRD54Q6NXT1 300 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 CYP4V2Q6ZWL3 525 aaPredicted RBP11.77□□□□□ -0.53
C2orf88-201ENST00000340623 OTOAQ7RTW8 1153 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 TBC1D3Q8IZP1 549 aaPredicted RBP11.77□□□□□ -0.53
C2orf88-201ENST00000340623 OR4L1Q8NH43 312 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 TCP10LQ8TDR4 215 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 FEM1CQ96JP0 617 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 HIST1H2AHQ96KK5 128 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 HIST1H2AJQ99878 128 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 H2AFJQ9BTM1 129 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 TSSK1BQ9BXA7 367 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 CD274Q9NZQ7 290 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 SCN5AQ14524 2016 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 VNN2O95498 520 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 MAP4P27816 1152 aaKnown RBP11.77□□□□□ -0.53
C2orf88-201ENST00000340623 GRM3Q14832 879 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 DPY19L3Q6ZPD9 716 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 PCDH20Q8N6Y1 951 aaKnown RBP11.77□□□□□ -0.53
C2orf88-201ENST00000340623 OR13C4Q8NGS5 318 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 FIBINQ8TAL6 211 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 AZIN2Q96A70 460 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 ULK4Q96C45 1275 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 TMEM237Q96Q45 408 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 SLC17A6Q9P2U8 582 aa11.77□□□□□ -0.53
C2orf88-201ENST00000340623 CCDC160A6NGH7 325 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 OR51F1A6NGY5 319 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 DRGXA6NNA5 263 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 KAT7O95251 611 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 MYL2P10916 166 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 GPR1P46091 355 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 AFTPHQ6ULP2 937 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 ZCCHC23Q6ZST2 131 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 CMC1Q7Z7K0 106 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 SLC41A1Q8IVJ1 513 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 CYP4X1Q8N118 509 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 OR14C36Q8NHC7 312 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 OSCP1Q8WVF1 389 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 PGM2Q96G03 612 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 PRICKLE1Q96MT3 831 aaPredicted RBP11.76□□□□□ -0.53
C2orf88-201ENST00000340623 FOPNLQ96NB1 174 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 RAB3IPQ96QF0 476 aaPredicted RBP11.76□□□□□ -0.53
C2orf88-201ENST00000340623 FKBPLQ9UIM3 349 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms