RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 LTBP3Q9NS15 1303 aa14.44□□□□□ -0.1
CPSF7-201ENST00000340437 A0A087X1B8 175 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 SUPT3HB4E1H0 165 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 NPHS1O60500 1241 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 HGFP14210 728 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 KCNE1P15382 129 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 LHX1P48742 406 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 TECRLQ5HYJ1 363 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 ARHGAP12Q8IWW6 846 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 C19orf60Q96EN9 201 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 OSBPL11Q9BXB4 747 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 ZNF385DQ9H6B1 395 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 ENTPD7Q9NQZ7 604 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 RRN3Q9NYV6 651 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 THEGQ9P2T0 379 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 PAPPA2Q9BXP8 1791 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 BTBD19C9JJ37 291 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 SCAMP3O14828 347 aaKnown RBP14.43□□□□□ -0.1
CPSF7-201ENST00000340437 COL6A2P12110 1019 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 PSEN2P49810 448 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 SERPINH1P50454 418 aaKnown RBP14.43□□□□□ -0.1
CPSF7-201ENST00000340437 PRKAA2P54646 552 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 YWHAHQ04917 246 aaPredicted RBP14.43□□□□□ -0.1
CPSF7-201ENST00000340437 GALNT3Q14435 633 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 KCTD21Q4G0X4 260 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 RABL3Q5HYI8 236 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 GPR107Q5VW38 600 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 GPR141Q7Z602 305 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 TICAM1Q8IUC6 712 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 ERLEC1Q96DZ1 483 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 FCRL5Q96RD9 977 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 LMCD1Q9NZU5 365 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 CDC14AQ9UNH5 594 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 ST3GAL5Q9UNP4 418 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 MATN3O15232 486 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 PSMD3O43242 534 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 TBX18O95935 607 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 ALDOCP09972 364 aaKnown RBP14.43□□□□□ -0.1
CPSF7-201ENST00000340437 PCNAP12004 261 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 IL10P22301 178 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 CCNCP24863 283 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 SH3BGRP55822 239 aaPredicted RBP14.43□□□□□ -0.1
CPSF7-201ENST00000340437 DCTN2Q13561 401 aaKnown RBP14.43□□□□□ -0.1
CPSF7-201ENST00000340437 HERC3Q15034 1050 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 POTEHQ6S545 545 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 C2CD4AQ8NCU7 369 aaPredicted RBP14.43□□□□□ -0.1
CPSF7-201ENST00000340437 CATSPERBQ9H7T0 1116 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 USP22Q9UPT9 525 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 PHF24Q9UPV7 400 aa14.43□□□□□ -0.1
CPSF7-201ENST00000340437 KNL1Q8NG31 2342 aa14.42□□□□□ -0.1
CPSF7-201ENST00000340437 BRCA2P51587 3418 aa14.42□□□□□ -0.1
CPSF7-201ENST00000340437 SMIM35A0A1B0GVV1 85 aa14.42□□□□□ -0.1
CPSF7-201ENST00000340437 RBP1P09455 135 aa14.42□□□□□ -0.1
CPSF7-201ENST00000340437 SH3BP2P78314 561 aa14.42□□□□□ -0.1
CPSF7-201ENST00000340437 TMEM207Q6UWW9 146 aa14.42□□□□□ -0.1
CPSF7-201ENST00000340437 LRRTM3Q86VH5 581 aa14.42□□□□□ -0.1
CPSF7-201ENST00000340437 CHERPQ8IWX8 916 aaKnown RBP14.42□□□□□ -0.1
CPSF7-201ENST00000340437 PCYOX1LQ8NBM8 494 aa14.42□□□□□ -0.1
CPSF7-201ENST00000340437 TMEM74Q96NL1 305 aa14.42□□□□□ -0.1
CPSF7-201ENST00000340437 UXTQ9UBK9 157 aaPredicted RBP14.42□□□□□ -0.1
CPSF7-201ENST00000340437 TMCO1Q9UM00 188 aa14.42□□□□□ -0.1
CPSF7-201ENST00000340437 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.42□□□□□ -0.1
CPSF7-201ENST00000340437 ARL5AQ9Y689 179 aa14.42□□□□□ -0.1
CPSF7-201ENST00000340437 BPTFQ12830 3046 aa14.42□□□□□ -0.1
CPSF7-201ENST00000340437 M0QZ92 97 aa14.42□□□□□ -0.1
CPSF7-201ENST00000340437 AP1G1O43747 822 aa14.42□□□□□ -0.1
CPSF7-201ENST00000340437 ENTPD1P49961 510 aa14.42□□□□□ -0.1
CPSF7-201ENST00000340437 DIO3P55073 304 aa14.42□□□□□ -0.1
CPSF7-201ENST00000340437 METTL23Q86XA0 190 aa14.42□□□□□ -0.1
CPSF7-201ENST00000340437 LRRC43Q8N309 656 aa14.42□□□□□ -0.1
CPSF7-201ENST00000340437 NUDT8Q8WV74 236 aa14.42□□□□□ -0.1
CPSF7-201ENST00000340437 OLAHQ9NV23 265 aa14.42□□□□□ -0.1
CPSF7-201ENST00000340437 OAZ3Q9UMX2 235 aa14.42□□□□□ -0.1
CPSF7-201ENST00000340437 KCNH4Q9UQ05 1017 aa14.42□□□□□ -0.1
CPSF7-201ENST00000340437 TRIP12Q14669 1992 aaPredicted RBP14.42□□□□□ -0.1
CPSF7-201ENST00000340437 A0A0J9YVX5 310 aa14.42□□□□□ -0.1
CPSF7-201ENST00000340437 DHRS12A0PJE2 317 aa14.42□□□□□ -0.1
CPSF7-201ENST00000340437 CNTN5O94779 1100 aa14.42□□□□□ -0.1
CPSF7-201ENST00000340437 HAPLN1P10915 354 aaPredicted RBP14.42□□□□□ -0.1
CPSF7-201ENST00000340437 PCSK1P29120 753 aa14.42□□□□□ -0.1
CPSF7-201ENST00000340437 OXTRP30559 389 aa14.42□□□□□ -0.1
CPSF7-201ENST00000340437 SLC7A1P30825 629 aa14.42□□□□□ -0.1
CPSF7-201ENST00000340437 SCAPQ12770 1279 aa14.42□□□□□ -0.1
CPSF7-201ENST00000340437 FRG1Q14331 258 aaKnown RBP14.42□□□□□ -0.1
CPSF7-201ENST00000340437 CCL14Q16627 93 aa14.42□□□□□ -0.1
CPSF7-201ENST00000340437 PABPC1LQ4VXU2 614 aaKnown RBP14.42□□□□□ -0.1
CPSF7-201ENST00000340437 OR2T34Q8NGX1 318 aa14.42□□□□□ -0.1
CPSF7-201ENST00000340437 OR2T3Q8NH03 318 aa14.42□□□□□ -0.1
CPSF7-201ENST00000340437 PSMG2Q969U7 264 aa14.42□□□□□ -0.1
CPSF7-201ENST00000340437 CLK4Q9HAZ1 481 aaKnown RBP14.42□□□□□ -0.1
CPSF7-201ENST00000340437 SUCOQ9UBS9 1254 aaKnown RBP14.42□□□□□ -0.1
CPSF7-201ENST00000340437 C17orf102A2RUQ5 167 aa14.41□□□□□ -0.1
CPSF7-201ENST00000340437 NME4O00746 187 aa14.41□□□□□ -0.1
CPSF7-201ENST00000340437 GABRDO14764 452 aa14.41□□□□□ -0.1
CPSF7-201ENST00000340437 NR4A1P22736 598 aa14.41□□□□□ -0.1
CPSF7-201ENST00000340437 HCAR3P49019 387 aa14.41□□□□□ -0.1
CPSF7-201ENST00000340437 EFEMP1Q12805 493 aa14.41□□□□□ -0.1
CPSF7-201ENST00000340437 NFYCQ13952 458 aa14.41□□□□□ -0.1
CPSF7-201ENST00000340437 LPIN1Q14693 890 aa14.41□□□□□ -0.1
CPSF7-201ENST00000340437 DDR2Q16832 855 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms