RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 KYQ8NBH2 561 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 CXorf40AQ8TE69 158 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 GATAD2BQ8WXI9 593 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 OR8D1Q8WZ84 308 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 BADQ92934 168 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 ZNF333Q96JL9 665 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 COX4I2Q96KJ9 171 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 ADAM2Q99965 735 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 ADI1Q9BV57 179 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 EMILIN3Q9NT22 766 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 MALT1Q9UDY8 824 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 VANGL2Q9ULK5 521 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 ERGIC3Q9Y282 383 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 PKP3Q9Y446 797 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 A0A0G2JMZ2 1700 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 LRRC37A2A6NM11 1700 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 LOC110117498-PIK3R3F6TDL0 507 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 RBP3P10745 1247 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 HOXA13P31271 388 aaPredicted RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 NRIP1P48552 1158 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 RHBDL3P58872 404 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 PPP2R2BQ00005 443 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 EXOC3L2Q2M3D2 409 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 CARD16Q5EG05 197 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 NOMO2Q5JPE7 1267 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 ALKBH2Q6NS38 261 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 QSOX2Q6ZRP7 698 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 ALDH16A1Q8IZ83 802 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 FTMTQ8N4E7 242 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 OR7A2PQ8NGA2 310 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 ZNF420Q8TAQ5 688 aaPredicted RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 TSPEARQ8WU66 669 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 PIK3R3Q92569 461 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 MAML1Q92585 1016 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 NXPE3Q969Y0 559 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 CINPQ9BW66 212 aaPredicted RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 SAP130Q9H0E3 1048 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 ARHGEF4Q9NR80 690 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 GIN1Q9NXP7 522 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 CALML5Q9NZT1 146 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 DEC1Q9P2X7 70 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 PLEKHA6Q9Y2H5 1048 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 ASTN2O75129 1339 aaPredicted RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 A0A1B0GVC2 190 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 OR14I1A6ND48 311 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 KCNK1O00180 336 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 TPD52L2O43399 206 aaKnown RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 DCXO43602 365 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 ZNF217O75362 1048 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 SRP72O76094 671 aaKnown RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 VAPBO95292 243 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 KRT1P04264 644 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 CYP2A6P11509 494 aaPredicted RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 MTHFD1P11586 935 aaKnown RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 SLC16A2P36021 539 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 TAF6P49848 677 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 LRIF1Q5T3J3 769 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 ZNF605Q86T29 641 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 OR52L1Q8NGH7 329 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 UHMK1Q8TAS1 419 aaKnown RBP3.3□□□□□ -1.88
CSMD3-202ENST00000339701 PIGOQ8TEQ8 1089 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 SLC22A17Q8WUG5 538 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 SLC41A3Q96GZ6 507 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 APOPT1Q96IL0 206 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 EXOC2Q96KP1 924 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 TRPV5Q9NQA5 729 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 COQ3Q9NZJ6 369 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 KLQ9UEF7 1012 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 SLC30A1Q9Y6M5 507 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 ANKRD31Q8N7Z5 1873 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 ESPL1Q14674 2120 aa3.3□□□□□ -1.88
CSMD3-202ENST00000339701 A0A0J9YVX5 310 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 RNF103O00237 685 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 KERAO60938 352 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 TSC22D2O75157 780 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 GRAP2O75791 330 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 FSBPO95073 299 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 RPS15P62841 145 aaKnown RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 C1QBPQ07021 282 aaKnown RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 DPYSQ14117 519 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 PTGR1Q14914 329 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 PLEKHG6Q3KR16 790 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 SETMARQ53H47 684 aaPredicted RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 ZRANB3Q5FWF4 1079 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 SEL1L3Q68CR1 1132 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 KLHL24Q6TFL4 600 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 TMEM192Q8IY95 271 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 EMC1Q8N766 993 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 TPCN2Q8NHX9 752 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 LENG9Q96B70 501 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 CERS2Q96G23 380 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 PSKH2Q96QS6 385 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 DSN1Q9H410 356 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 LRRC40Q9H9A6 602 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 LRRC4BQ9NT99 713 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 ADPRHL2Q9NX46 363 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 TAS2R1Q9NYW7 299 aa3.29□□□□□ -1.88
CSMD3-202ENST00000339701 EVLQ9UI08 416 aaPredicted RBP3.29□□□□□ -1.88
CSMD3-202ENST00000339701 PCDHA6Q9UN73 950 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms