RNA–Protein interactions for RNA: ENST00000339497.7

CCNY-202, Transcript of cyclin Y, humanhuman

TSL 1 (best) BASIC

Gene CCNY, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNY-202ENST00000339497 RAI2Q9Y5P3 530 aa16.07■□□□□ 0.16
CCNY-202ENST00000339497 COX7A2P14406 83 aa16.07■□□□□ 0.16
CCNY-202ENST00000339497 RRM2P31350 389 aa16.07■□□□□ 0.16
CCNY-202ENST00000339497 MAPK10P53779 464 aa16.07■□□□□ 0.16
CCNY-202ENST00000339497 GCNT7Q6ZNI0 430 aa16.07■□□□□ 0.16
CCNY-202ENST00000339497 SUSD6Q92537 303 aa16.07■□□□□ 0.16
CCNY-202ENST00000339497 GRIP2Q9C0E4 1043 aa16.07■□□□□ 0.16
CCNY-202ENST00000339497 IGFLR1Q9H665 355 aa16.07■□□□□ 0.16
CCNY-202ENST00000339497 RPP40O75818 363 aaKnown RBP16.07■□□□□ 0.16
CCNY-202ENST00000339497 NCBP2-AS2Q69YL0 99 aa16.07■□□□□ 0.16
CCNY-202ENST00000339497 TMEM26Q6ZUK4 368 aa16.07■□□□□ 0.16
CCNY-202ENST00000339497 GLMNQ92990 594 aa16.07■□□□□ 0.16
CCNY-202ENST00000339497 LENG8Q96PV6 779 aaPredicted RBP16.07■□□□□ 0.16
CCNY-202ENST00000339497 SLC12A4Q9UP95 1085 aa16.07■□□□□ 0.16
CCNY-202ENST00000339497 TIMM22Q9Y584 194 aa16.07■□□□□ 0.16
CCNY-202ENST00000339497 ATXN2Q99700 1313 aaKnown RBP16.06■□□□□ 0.16
CCNY-202ENST00000339497 FKTNO75072 461 aa16.06■□□□□ 0.16
CCNY-202ENST00000339497 PKMP14618 531 aaKnown RBP16.06■□□□□ 0.16
CCNY-202ENST00000339497 GNA12Q03113 381 aa16.06■□□□□ 0.16
CCNY-202ENST00000339497 CRHR2Q13324 411 aa16.06■□□□□ 0.16
CCNY-202ENST00000339497 SGCGQ13326 291 aa16.06■□□□□ 0.16
CCNY-202ENST00000339497 HNRNPDQ14103 355 aaKnown RBP16.06■□□□□ 0.16
CCNY-202ENST00000339497 TCEA2Q15560 299 aa16.06■□□□□ 0.16
CCNY-202ENST00000339497 CLVS1Q8IUQ0 354 aaPredicted RBP16.06■□□□□ 0.16
CCNY-202ENST00000339497 NAT16Q8N8M0 369 aa16.06■□□□□ 0.16
CCNY-202ENST00000339497 UPF1Q92900 1129 aaKnown RBP eCLIP16.06■□□□□ 0.166e-8■■■■□ 20.6
CCNY-202ENST00000339497 DNAJC1Q96KC8 554 aaKnown RBP16.06■□□□□ 0.16
CCNY-202ENST00000339497 TRMOQ9BU70 441 aa16.06■□□□□ 0.16
CCNY-202ENST00000339497 DDX28Q9NUL7 540 aaKnown RBP16.06■□□□□ 0.16
CCNY-202ENST00000339497 IGSF9Q9P2J2 1179 aa16.06■□□□□ 0.16
CCNY-202ENST00000339497 MYH11P35749 1972 aa16.06■□□□□ 0.16
CCNY-202ENST00000339497 CICQ96RK0 1608 aaPredicted RBP16.06■□□□□ 0.16
CCNY-202ENST00000339497 PRMT5O14744 637 aaPredicted RBP16.06■□□□□ 0.16
CCNY-202ENST00000339497 ADH1AP07327 375 aa16.06■□□□□ 0.16
CCNY-202ENST00000339497 HSMCR30P0CW71 290 aa16.06■□□□□ 0.16
CCNY-202ENST00000339497 COL6A2P12110 1019 aa16.06■□□□□ 0.16
CCNY-202ENST00000339497 ZIK1Q3SY52 487 aaPredicted RBP16.06■□□□□ 0.16
CCNY-202ENST00000339497 TMEM63BQ5T3F8 832 aa16.06■□□□□ 0.16
CCNY-202ENST00000339497 CLEC6AQ6EIG7 209 aa16.06■□□□□ 0.16
CCNY-202ENST00000339497 FSTL5Q8N475 847 aaPredicted RBP16.06■□□□□ 0.16
CCNY-202ENST00000339497 XYLT2Q9H1B5 865 aa16.06■□□□□ 0.16
CCNY-202ENST00000339497 AHSPQ9NZD4 102 aa16.06■□□□□ 0.16
CCNY-202ENST00000339497 EVLQ9UI08 416 aaPredicted RBP16.06■□□□□ 0.16
CCNY-202ENST00000339497 TCEA3O75764 348 aa16.06■□□□□ 0.16
CCNY-202ENST00000339497 WDR47O94967 919 aa16.06■□□□□ 0.16
CCNY-202ENST00000339497 IFNA14P01570 189 aa16.06■□□□□ 0.16
CCNY-202ENST00000339497 PPP1R15BQ5SWA1 713 aa16.06■□□□□ 0.16
CCNY-202ENST00000339497 FIBCD1Q8N539 461 aa16.06■□□□□ 0.16
CCNY-202ENST00000339497 GPR21Q99679 349 aa16.06■□□□□ 0.16
CCNY-202ENST00000339497 CFAP97Q9P2B7 532 aa16.06■□□□□ 0.16
CCNY-202ENST00000339497 RPL26L1Q9UNX3 145 aaKnown RBP16.06■□□□□ 0.16
CCNY-202ENST00000339497 C9JVG2 144 aa16.06■□□□□ 0.16
CCNY-202ENST00000339497 PSMB9P28065 219 aa16.06■□□□□ 0.16
CCNY-202ENST00000339497 CTNNB1P35222 781 aa16.06■□□□□ 0.16
CCNY-202ENST00000339497 GLUD2P49448 558 aa16.06■□□□□ 0.16
CCNY-202ENST00000339497 GPX6P59796 221 aa16.06■□□□□ 0.16
CCNY-202ENST00000339497 RINLQ6ZS11 566 aa16.06■□□□□ 0.16
CCNY-202ENST00000339497 CAMK1DQ8IU85 385 aa16.06■□□□□ 0.16
CCNY-202ENST00000339497 ZNF276Q8N554 614 aa16.06■□□□□ 0.16
CCNY-202ENST00000339497 PIWIL1Q96J94 861 aaKnown RBP16.06■□□□□ 0.16
CCNY-202ENST00000339497 NUP98P52948 1817 aa16.05■□□□□ 0.16
CCNY-202ENST00000339497 RGS5O15539 181 aa16.05■□□□□ 0.16
CCNY-202ENST00000339497 NRP2O60462 931 aa16.05■□□□□ 0.16
CCNY-202ENST00000339497 ACSL4O60488 711 aa16.05■□□□□ 0.16
CCNY-202ENST00000339497 KCNH1O95259 989 aa16.05■□□□□ 0.16
CCNY-202ENST00000339497 CXCL14O95715 111 aa16.05■□□□□ 0.16
CCNY-202ENST00000339497 ATP6V1C1P21283 382 aa16.05■□□□□ 0.16
CCNY-202ENST00000339497 ABRQ12979 859 aa16.05■□□□□ 0.16
CCNY-202ENST00000339497 PRSS55Q6UWB4 352 aaPredicted RBP16.05■□□□□ 0.16
CCNY-202ENST00000339497 THG1LQ9NWX6 298 aaKnown RBP16.05■□□□□ 0.16
CCNY-202ENST00000339497 ADAMTSL3P82987 1691 aa16.05■□□□□ 0.16
CCNY-202ENST00000339497 DOT1LQ8TEK3 1739 aa16.05■□□□□ 0.16
CCNY-202ENST00000339497 NPEPPSL1A6NEC2 478 aa16.05■□□□□ 0.16
CCNY-202ENST00000339497 OTCP00480 354 aa16.05■□□□□ 0.16
CCNY-202ENST00000339497 LPCAT4Q643R3 524 aa16.05■□□□□ 0.16
CCNY-202ENST00000339497 RBFAQ8N0V3 343 aa16.05■□□□□ 0.16
CCNY-202ENST00000339497 TRAPPC9Q96Q05 1148 aa16.05■□□□□ 0.16
CCNY-202ENST00000339497 HBEGFQ99075 208 aa16.05■□□□□ 0.16
CCNY-202ENST00000339497 RIBC2Q9H4K1 309 aa16.05■□□□□ 0.16
CCNY-202ENST00000339497 H0YGN5 161 aa16.05■□□□□ 0.16
CCNY-202ENST00000339497 IRAK2O43187 625 aa16.05■□□□□ 0.16
CCNY-202ENST00000339497 TM7SF2O76062 418 aa16.05■□□□□ 0.16
CCNY-202ENST00000339497 ALDH1A2O94788 518 aa16.05■□□□□ 0.16
CCNY-202ENST00000339497 OSTM1Q86WC4 334 aa16.05■□□□□ 0.16
CCNY-202ENST00000339497 ACTRT2Q8TDY3 377 aa16.05■□□□□ 0.16
CCNY-202ENST00000339497 PPP3R2Q96LZ3 170 aa16.05■□□□□ 0.16
CCNY-202ENST00000339497 PEBP4Q96S96 227 aa16.05■□□□□ 0.16
CCNY-202ENST00000339497 EBF4Q9BQW3 602 aa16.05■□□□□ 0.16
CCNY-202ENST00000339497 SNX6Q9UNH7 406 aa16.05■□□□□ 0.16
CCNY-202ENST00000339497 NFS1Q9Y697 457 aa16.05■□□□□ 0.16
CCNY-202ENST00000339497 EME2A4GXA9 379 aaPredicted RBP16.04■□□□□ 0.16
CCNY-202ENST00000339497 TMEM88BA6NKF7 163 aa16.04■□□□□ 0.16
CCNY-202ENST00000339497 RASSF9O75901 435 aa16.04■□□□□ 0.16
CCNY-202ENST00000339497 SNAI1O95863 264 aaPredicted RBP16.04■□□□□ 0.16
CCNY-202ENST00000339497 RALGDSQ12967 914 aa16.04■□□□□ 0.16
CCNY-202ENST00000339497 TSTD2Q5T7W7 516 aa16.04■□□□□ 0.16
CCNY-202ENST00000339497 NAIF1Q69YI7 327 aaPredicted RBP16.04■□□□□ 0.16
CCNY-202ENST00000339497 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.04■□□□□ 0.162e-6■■■■■ 146.3
CCNY-202ENST00000339497 DTNBP1Q96EV8 351 aa16.04■□□□□ 0.16
CCNY-202ENST00000339497 PTCD3Q96EY7 689 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms