RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 PEX13Q92968 403 aa14.79□□□□□ -0.04
CDK5RAP3-201ENST00000338399 TRABDQ9H4I3 376 aa14.79□□□□□ -0.04
CDK5RAP3-201ENST00000338399 SUDS3Q9H7L9 328 aaPredicted RBP14.79□□□□□ -0.04
CDK5RAP3-201ENST00000338399 NLE1Q9NVX2 485 aaPredicted RBP14.79□□□□□ -0.04
CDK5RAP3-201ENST00000338399 HACD3Q9P035 362 aa14.79□□□□□ -0.04
CDK5RAP3-201ENST00000338399 HCN2Q9UL51 889 aa14.79□□□□□ -0.04
CDK5RAP3-201ENST00000338399 RIMKLBQ9ULI2 386 aa14.79□□□□□ -0.04
CDK5RAP3-201ENST00000338399 PHTF1Q9UMS5 762 aa14.79□□□□□ -0.04
CDK5RAP3-201ENST00000338399 ZNF711Q9Y462 761 aa14.79□□□□□ -0.04
CDK5RAP3-201ENST00000338399 PRUNE2Q8WUY3 3088 aa14.79□□□□□ -0.04
CDK5RAP3-201ENST00000338399 EDDM13A0A1B0GTR0 161 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 HMX2A2RU54 273 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 OR51F1A6NGY5 319 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 SLC7A4O43246 635 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 RPP40O75818 363 aaKnown RBP14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 HNF1BP35680 557 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 CTBP1Q13363 440 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 HNRNPA1L2Q32P51 320 aaKnown RBP14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 GRTP1Q5TC63 336 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 MROH9Q5TGP6 573 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 EGFLAMQ63HQ2 1017 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 NEPROQ6NW34 567 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 KDM7AQ6ZMT4 941 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 NUDT18Q6ZVK8 323 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 LYSMD3Q7Z3D4 306 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 PTAR1Q7Z6K3 402 aaPredicted RBP14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 CNTN4Q8IWV2 1026 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 C4orf33Q8N1A6 199 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 SLC44A3Q8N4M1 653 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 DEFB123Q8N688 67 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 CDKN2AIPNLQ96HQ2 116 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 P2RY13Q9BPV8 354 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 SELENOSQ9BQE4 189 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 GPR63Q9BZJ6 419 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 TMEM245Q9H330 911 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 BPIFA1Q9NP55 256 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 THAP10Q9P2Z0 257 aaPredicted RBP14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 ACTL7BQ9Y614 415 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 ATG2BQ96BY7 2078 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 COL4A2P08572 1712 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 A8MX80 341 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 STX7O15400 261 aaKnown RBP14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 SIN3BO75182 1162 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 MT-ND3P03897 115 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 ASGR2P07307 311 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 BRAFP15056 766 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 IL12RB1P42701 662 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 ABCG1P45844 678 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 PDE1BQ01064 536 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 SEMG2Q02383 582 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 C9orf64Q5T6V5 341 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 STK40Q8N2I9 435 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 EID2BQ96D98 161 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 ATXN7L3BQ96GX2 97 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 ACOX2Q99424 681 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 KLF6Q99612 283 aaPredicted RBP14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 RBBP8Q99708 897 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 FAM167BQ9BTA0 163 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 MFSD1Q9H3U5 465 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 KCNK9Q9NPC2 374 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 POLR3BQ9NW08 1133 aaPredicted RBP14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 NSMCE4AQ9NXX6 385 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 SENP1Q9P0U3 644 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 PRDM4Q9UKN5 801 aa14.78□□□□□ -0.04
CDK5RAP3-201ENST00000338399 C1orf232A0A0U1RR37 186 aa14.77□□□□□ -0.05
CDK5RAP3-201ENST00000338399 A0A1W2PQ67 120 aa14.77□□□□□ -0.05
CDK5RAP3-201ENST00000338399 CCDC162PA2VCL2 907 aa14.77□□□□□ -0.05
CDK5RAP3-201ENST00000338399 CAPN8A6NHC0 703 aa14.77□□□□□ -0.05
CDK5RAP3-201ENST00000338399 SPECC1L-ADORA2AF8WAN1 911 aa14.77□□□□□ -0.05
CDK5RAP3-201ENST00000338399 GOLGA8RI6L899 631 aa14.77□□□□□ -0.05
CDK5RAP3-201ENST00000338399 GOT2P00505 430 aaKnown RBP14.77□□□□□ -0.05
CDK5RAP3-201ENST00000338399 ITGA2BP08514 1039 aa14.77□□□□□ -0.05
CDK5RAP3-201ENST00000338399 KRT4P19013 534 aa14.77□□□□□ -0.05
CDK5RAP3-201ENST00000338399 CNTFP26441 200 aa14.77□□□□□ -0.05
CDK5RAP3-201ENST00000338399 CTHP32929 405 aa14.77□□□□□ -0.05
CDK5RAP3-201ENST00000338399 SLC1A2P43004 574 aa14.77□□□□□ -0.05
CDK5RAP3-201ENST00000338399 MPP1Q00013 466 aa14.77□□□□□ -0.05
CDK5RAP3-201ENST00000338399 SMAD2Q15796 467 aaKnown RBP14.77□□□□□ -0.05
CDK5RAP3-201ENST00000338399 LRRC73Q5JTD7 316 aa14.77□□□□□ -0.05
CDK5RAP3-201ENST00000338399 ZNF470Q6ECI4 717 aa14.77□□□□□ -0.05
CDK5RAP3-201ENST00000338399 GPR153Q6NV75 609 aa14.77□□□□□ -0.05
CDK5RAP3-201ENST00000338399 TXNDC11Q6PKC3 985 aa14.77□□□□□ -0.05
CDK5RAP3-201ENST00000338399 NDUFAF2Q8N183 169 aa14.77□□□□□ -0.05
CDK5RAP3-201ENST00000338399 ARFGAP2Q8N6H7 521 aa14.77□□□□□ -0.05
CDK5RAP3-201ENST00000338399 OTUD6BQ8N6M0 293 aa14.77□□□□□ -0.05
CDK5RAP3-201ENST00000338399 PNPLA1Q8N8W4 532 aa14.77□□□□□ -0.05
CDK5RAP3-201ENST00000338399 CALML6Q8TD86 181 aa14.77□□□□□ -0.05
CDK5RAP3-201ENST00000338399 MTBPQ96DY7 904 aa14.77□□□□□ -0.05
CDK5RAP3-201ENST00000338399 LRIG1Q96JA1 1093 aa14.77□□□□□ -0.05
CDK5RAP3-201ENST00000338399 SERAC1Q96JX3 654 aa14.77□□□□□ -0.05
CDK5RAP3-201ENST00000338399 SMC6Q96SB8 1091 aa14.77□□□□□ -0.05
CDK5RAP3-201ENST00000338399 OSBPL1AQ9BXW6 950 aa14.77□□□□□ -0.05
CDK5RAP3-201ENST00000338399 ZFYVE1Q9HBF4 777 aa14.77□□□□□ -0.05
CDK5RAP3-201ENST00000338399 HEBP1Q9NRV9 189 aa14.77□□□□□ -0.05
CDK5RAP3-201ENST00000338399 CACNA2D2Q9NY47 1150 aa14.77□□□□□ -0.05
CDK5RAP3-201ENST00000338399 ADAM21Q9UKJ8 722 aa14.77□□□□□ -0.05
CDK5RAP3-201ENST00000338399 PPIL1Q9Y3C6 166 aa14.77□□□□□ -0.05
CDK5RAP3-201ENST00000338399 BPTFQ12830 3046 aa14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 NPIPB15A6NHN6 443 aaPredicted RBP14.76□□□□□ -0.05
CDK5RAP3-201ENST00000338399 SPAG7O75391 227 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms