RNA–Protein interactions for RNA: ENST00000338372.6

VSTM1-201, Transcript of V-set and transmembrane domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSTM1, Length 1,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-201ENST00000338372 SEPT3Q9UH03 358 aa17.11■□□□□ 0.33
VSTM1-201ENST00000338372 PPIL1Q9Y3C6 166 aa17.11■□□□□ 0.33
VSTM1-201ENST00000338372 PCDHGC4Q9Y5F7 938 aa17.11■□□□□ 0.33
VSTM1-201ENST00000338372 PCDHGA8Q9Y5G5 932 aa17.11■□□□□ 0.33
VSTM1-201ENST00000338372 TNFRSF10CO14798 259 aa17.1■□□□□ 0.33
VSTM1-201ENST00000338372 NOBOXO60393 691 aa17.1■□□□□ 0.33
VSTM1-201ENST00000338372 PCCBP05166 539 aa17.1■□□□□ 0.33
VSTM1-201ENST00000338372 LHCGRP22888 699 aa17.1■□□□□ 0.33
VSTM1-201ENST00000338372 TRAF2Q12933 501 aa17.1■□□□□ 0.33
VSTM1-201ENST00000338372 CNGA3Q16281 694 aa17.1■□□□□ 0.33
VSTM1-201ENST00000338372 ESRP1Q6NXG1 681 aaKnown RBP17.1■□□□□ 0.33
VSTM1-201ENST00000338372 PNCKQ6P2M8 343 aa17.1■□□□□ 0.33
VSTM1-201ENST00000338372 B3GNT8Q7Z7M8 397 aa17.1■□□□□ 0.33
VSTM1-201ENST00000338372 TEX26Q8N6G2 289 aa17.1■□□□□ 0.33
VSTM1-201ENST00000338372 ARL10Q8N8L6 244 aa17.1■□□□□ 0.33
VSTM1-201ENST00000338372 ZNF248Q8NDW4 579 aa17.1■□□□□ 0.33
VSTM1-201ENST00000338372 UBL7Q96S82 380 aaPredicted RBP17.1■□□□□ 0.33
VSTM1-201ENST00000338372 ZWILCHQ9H900 591 aa17.1■□□□□ 0.33
VSTM1-201ENST00000338372 KLQ9UEF7 1012 aa17.1■□□□□ 0.33
VSTM1-201ENST00000338372 CAPN11Q9UMQ6 739 aa17.1■□□□□ 0.33
VSTM1-201ENST00000338372 ST14Q9Y5Y6 855 aa17.1■□□□□ 0.33
VSTM1-201ENST00000338372 HELZ2Q9BYK8 2649 aaKnown RBP17.1■□□□□ 0.33
VSTM1-201ENST00000338372 A8MX80 341 aa17.09■□□□□ 0.33
VSTM1-201ENST00000338372 H3BRJ5 948 aa17.09■□□□□ 0.33
VSTM1-201ENST00000338372 ATXN7O15265 892 aaPredicted RBP17.09■□□□□ 0.33
VSTM1-201ENST00000338372 FZD6O60353 706 aa17.09■□□□□ 0.33
VSTM1-201ENST00000338372 CD48P09326 243 aa17.09■□□□□ 0.33
VSTM1-201ENST00000338372 ALPIP09923 528 aa17.09■□□□□ 0.33
VSTM1-201ENST00000338372 RPIAP49247 311 aa17.09■□□□□ 0.33
VSTM1-201ENST00000338372 RENBPP51606 427 aa17.09■□□□□ 0.33
VSTM1-201ENST00000338372 PCBP4P57723 403 aaKnown RBP17.09■□□□□ 0.33
VSTM1-201ENST00000338372 POLR2LP62875 67 aaKnown RBP17.09■□□□□ 0.33
VSTM1-201ENST00000338372 PIGHQ14442 188 aaPredicted RBP17.09■□□□□ 0.33
VSTM1-201ENST00000338372 TCEA2Q15560 299 aa17.09■□□□□ 0.33
VSTM1-201ENST00000338372 ATP13A4Q4VNC1 1196 aa17.09■□□□□ 0.33
VSTM1-201ENST00000338372 C3orf38Q5JPI3 329 aa17.09■□□□□ 0.33
VSTM1-201ENST00000338372 CLEC14AQ86T13 490 aa17.09■□□□□ 0.33
VSTM1-201ENST00000338372 C17orf82Q86X59 251 aaPredicted RBP17.09■□□□□ 0.33
VSTM1-201ENST00000338372 OR56A4Q8NGH8 313 aa17.09■□□□□ 0.33
VSTM1-201ENST00000338372 CCL4L1Q8NHW4 92 aa17.09■□□□□ 0.33
VSTM1-201ENST00000338372 PTCD2Q8WV60 388 aaKnown RBP17.09■□□□□ 0.33
VSTM1-201ENST00000338372 SNRNP27Q8WVK2 155 aaKnown RBP17.09■□□□□ 0.33
VSTM1-201ENST00000338372 PIH1D2Q8WWB5 315 aa17.09■□□□□ 0.33
VSTM1-201ENST00000338372 GLMNQ92990 594 aa17.09■□□□□ 0.33
VSTM1-201ENST00000338372 CCDC74AQ96AQ1 378 aa17.09■□□□□ 0.33
VSTM1-201ENST00000338372 FCRL3Q96P31 734 aaPredicted RBP17.09■□□□□ 0.33
VSTM1-201ENST00000338372 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.09■□□□□ 0.33
VSTM1-201ENST00000338372 GPR34Q9UPC5 381 aa17.09■□□□□ 0.33
VSTM1-201ENST00000338372 AHCTF1Q8WYP5 2266 aa17.08■□□□□ 0.33
VSTM1-201ENST00000338372 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.08■□□□□ 0.32
VSTM1-201ENST00000338372 SOCS5O75159 536 aa17.08■□□□□ 0.32
VSTM1-201ENST00000338372 HEXIM1O94992 359 aaKnown RBP17.08■□□□□ 0.32
VSTM1-201ENST00000338372 SERPINC1P01008 464 aa17.08■□□□□ 0.32
VSTM1-201ENST00000338372 TNFP01375 233 aa17.08■□□□□ 0.32
VSTM1-201ENST00000338372 PRB1P04280 392 aa17.08■□□□□ 0.32
VSTM1-201ENST00000338372 GYPCP04921 128 aa17.08■□□□□ 0.32
VSTM1-201ENST00000338372 ELFN1P0C7U0 828 aa17.08■□□□□ 0.32
VSTM1-201ENST00000338372 HTR1BP28222 390 aa17.08■□□□□ 0.32
VSTM1-201ENST00000338372 CCL7P80098 99 aa17.08■□□□□ 0.32
VSTM1-201ENST00000338372 ZBED6P86452 979 aa17.08■□□□□ 0.32
VSTM1-201ENST00000338372 MMRN1Q13201 1228 aa17.08■□□□□ 0.32
VSTM1-201ENST00000338372 TMCO3Q6UWJ1 677 aa17.08■□□□□ 0.32
VSTM1-201ENST00000338372 RD3Q7Z3Z2 195 aa17.08■□□□□ 0.32
VSTM1-201ENST00000338372 GKN2Q86XP6 184 aa17.08■□□□□ 0.32
VSTM1-201ENST00000338372 NRROSQ86YC3 692 aa17.08■□□□□ 0.32
VSTM1-201ENST00000338372 WDR48Q8TAF3 677 aa17.08■□□□□ 0.32
VSTM1-201ENST00000338372 HSPH1Q92598 858 aa17.08■□□□□ 0.32
VSTM1-201ENST00000338372 MCCC1Q96RQ3 725 aaPredicted RBP17.08■□□□□ 0.32
VSTM1-201ENST00000338372 TEX101Q9BY14 249 aa17.08■□□□□ 0.32
VSTM1-201ENST00000338372 TMEM168Q9H0V1 697 aa17.08■□□□□ 0.32
VSTM1-201ENST00000338372 GULP1Q9UBP9 304 aa17.08■□□□□ 0.32
VSTM1-201ENST00000338372 APPL1Q9UKG1 709 aa17.08■□□□□ 0.32
VSTM1-201ENST00000338372 BZW2Q9Y6E2 419 aaKnown RBP17.08■□□□□ 0.32
VSTM1-201ENST00000338372 A0A0U1RQS6 177 aa17.07■□□□□ 0.32
VSTM1-201ENST00000338372 SYCE3A1L190 88 aa17.07■□□□□ 0.32
VSTM1-201ENST00000338372 NPIPB15A6NHN6 443 aaPredicted RBP17.07■□□□□ 0.32
VSTM1-201ENST00000338372 TK2O00142 265 aa17.07■□□□□ 0.32
VSTM1-201ENST00000338372 SOD1P00441 154 aa17.07■□□□□ 0.32
VSTM1-201ENST00000338372 SERPING1P05155 500 aa17.07■□□□□ 0.32
VSTM1-201ENST00000338372 CEACAM5P06731 702 aa17.07■□□□□ 0.32
VSTM1-201ENST00000338372 PDHA1P08559 390 aa17.07■□□□□ 0.32
VSTM1-201ENST00000338372 CTSEP14091 401 aa17.07■□□□□ 0.32
VSTM1-201ENST00000338372 HSPA9P38646 679 aaKnown RBP17.07■□□□□ 0.32
VSTM1-201ENST00000338372 ARL4AP40617 200 aa17.07■□□□□ 0.32
VSTM1-201ENST00000338372 MAXP61244 160 aa17.07■□□□□ 0.32
VSTM1-201ENST00000338372 HLTFQ14527 1009 aaKnown RBP eCLIP17.07■□□□□ 0.32
VSTM1-201ENST00000338372 CFAP58Q5T655 872 aa17.07■□□□□ 0.32
VSTM1-201ENST00000338372 ALG1LQ6GMV1 187 aa17.07■□□□□ 0.32
VSTM1-201ENST00000338372 GPR155Q7Z3F1 870 aa17.07■□□□□ 0.32
VSTM1-201ENST00000338372 HSD11B1LQ7Z5J1 315 aa17.07■□□□□ 0.32
VSTM1-201ENST00000338372 TECPR1Q7Z6L1 1165 aa17.07■□□□□ 0.32
VSTM1-201ENST00000338372 LSM14AQ8ND56 463 aaKnown RBP17.07■□□□□ 0.32
VSTM1-201ENST00000338372 GPBAR1Q8TDU6 330 aa17.07■□□□□ 0.32
VSTM1-201ENST00000338372 MAML1Q92585 1016 aa17.07■□□□□ 0.32
VSTM1-201ENST00000338372 SCRN2Q96FV2 425 aa17.07■□□□□ 0.32
VSTM1-201ENST00000338372 LIN37Q96GY3 246 aaPredicted RBP17.07■□□□□ 0.32
VSTM1-201ENST00000338372 NAF1Q96HR8 494 aaKnown RBP17.07■□□□□ 0.32
VSTM1-201ENST00000338372 SMIM14Q96QK8 99 aa17.07■□□□□ 0.32
VSTM1-201ENST00000338372 NUP85Q9BW27 656 aa17.07■□□□□ 0.32
VSTM1-201ENST00000338372 SIRPGQ9P1W8 387 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms