RNA–Protein interactions for RNA: ENST00000338325.1

CSMD2-202, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 1 (best) BASIC

Gene CSMD2, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-202ENST00000338325 B4GAT1O43505 415 aa11.53□□□□□ -0.56
CSMD2-202ENST00000338325 CCL4P13236 92 aa11.53□□□□□ -0.56
CSMD2-202ENST00000338325 CHRNB2P17787 502 aa11.53□□□□□ -0.56
CSMD2-202ENST00000338325 SERPINA4P29622 427 aa11.53□□□□□ -0.56
CSMD2-202ENST00000338325 TRIM23P36406 574 aa11.53□□□□□ -0.56
CSMD2-202ENST00000338325 STAT1P42224 750 aa11.53□□□□□ -0.56
CSMD2-202ENST00000338325 MAZP56270 477 aaKnown RBP11.53□□□□□ -0.56
CSMD2-202ENST00000338325 OR1D5P58170 312 aa11.53□□□□□ -0.56
CSMD2-202ENST00000338325 PTP4A2Q12974 167 aa11.53□□□□□ -0.56
CSMD2-202ENST00000338325 BECN1Q14457 450 aa11.53□□□□□ -0.56
CSMD2-202ENST00000338325 NR1D2Q14995 579 aa11.53□□□□□ -0.56
CSMD2-202ENST00000338325 AMZ1Q400G9 498 aa11.53□□□□□ -0.56
CSMD2-202ENST00000338325 SCYL2Q6P3W7 929 aa11.53□□□□□ -0.56
CSMD2-202ENST00000338325 BORAQ6PGQ7 559 aa11.53□□□□□ -0.56
CSMD2-202ENST00000338325 LIPIQ6XZB0 460 aa11.53□□□□□ -0.56
CSMD2-202ENST00000338325 SRLQ86TD4 932 aa11.53□□□□□ -0.56
CSMD2-202ENST00000338325 ZNF564Q8TBZ8 553 aaPredicted RBP11.53□□□□□ -0.56
CSMD2-202ENST00000338325 TAAR9Q96RI9 348 aa11.53□□□□□ -0.56
CSMD2-202ENST00000338325 NUDT22Q9BRQ3 303 aa11.53□□□□□ -0.56
CSMD2-202ENST00000338325 FZD10Q9ULW2 581 aa11.53□□□□□ -0.56
CSMD2-202ENST00000338325 IGHV5-10-1A0A0J9YXX1 117 aa11.52□□□□□ -0.57
CSMD2-202ENST00000338325 RHPN2P1A8MT19 583 aa11.52□□□□□ -0.57
CSMD2-202ENST00000338325 J3KR12 359 aa11.52□□□□□ -0.57
CSMD2-202ENST00000338325 PDE2AO00408 941 aaPredicted RBP11.52□□□□□ -0.57
CSMD2-202ENST00000338325 ZW10O43264 779 aa11.52□□□□□ -0.57
CSMD2-202ENST00000338325 CCP110O43303 1012 aa11.52□□□□□ -0.57
CSMD2-202ENST00000338325 PRAMEF11O60813 436 aa11.52□□□□□ -0.57
CSMD2-202ENST00000338325 UNGP13051 313 aaPredicted RBP11.52□□□□□ -0.57
CSMD2-202ENST00000338325 CCNB1P14635 433 aa11.52□□□□□ -0.57
CSMD2-202ENST00000338325 GM2AP17900 193 aa11.52□□□□□ -0.57
CSMD2-202ENST00000338325 ALDH4A1P30038 563 aa11.52□□□□□ -0.57
CSMD2-202ENST00000338325 NSFP46459 744 aaKnown RBP11.52□□□□□ -0.57
CSMD2-202ENST00000338325 RGRP47804 291 aa11.52□□□□□ -0.57
CSMD2-202ENST00000338325 CSNK1DP48730 415 aa11.52□□□□□ -0.57
CSMD2-202ENST00000338325 AIF1P55008 147 aa11.52□□□□□ -0.57
CSMD2-202ENST00000338325 KCNAB2Q13303 367 aa11.52□□□□□ -0.57
CSMD2-202ENST00000338325 AFMIDQ63HM1 303 aa11.52□□□□□ -0.57
CSMD2-202ENST00000338325 WDR59Q6PJI9 974 aa11.52□□□□□ -0.57
CSMD2-202ENST00000338325 DPPA4Q7L190 304 aa11.52□□□□□ -0.57
CSMD2-202ENST00000338325 C17orf82Q86X59 251 aaPredicted RBP11.52□□□□□ -0.57
CSMD2-202ENST00000338325 PTRH1Q86Y79 214 aaKnown RBP11.52□□□□□ -0.57
CSMD2-202ENST00000338325 C3orf20Q8ND61 904 aa11.52□□□□□ -0.57
CSMD2-202ENST00000338325 RCBTB1Q8NDN9 531 aa11.52□□□□□ -0.57
CSMD2-202ENST00000338325 GPBAR1Q8TDU6 330 aa11.52□□□□□ -0.57
CSMD2-202ENST00000338325 ZDHHC1Q8WTX9 485 aa11.52□□□□□ -0.57
CSMD2-202ENST00000338325 NKD1Q969G9 470 aa11.52□□□□□ -0.57
CSMD2-202ENST00000338325 ECHDC3Q96DC8 303 aa11.52□□□□□ -0.57
CSMD2-202ENST00000338325 CCDC74BQ96LY2 380 aa11.52□□□□□ -0.57
CSMD2-202ENST00000338325 LGR4Q9BXB1 951 aa11.52□□□□□ -0.57
CSMD2-202ENST00000338325 GSDMCQ9BYG8 508 aa11.52□□□□□ -0.57
CSMD2-202ENST00000338325 GANQ9H2C0 597 aa11.52□□□□□ -0.57
CSMD2-202ENST00000338325 LRRC19Q9H756 370 aa11.52□□□□□ -0.57
CSMD2-202ENST00000338325 SPATS2LQ9NUQ6 558 aaKnown RBP11.52□□□□□ -0.57
CSMD2-202ENST00000338325 DONSONQ9NYP3 566 aa11.52□□□□□ -0.57
CSMD2-202ENST00000338325 ADAM22Q9P0K1 906 aa11.52□□□□□ -0.57
CSMD2-202ENST00000338325 ANKMY1Q9P2S6 941 aa11.52□□□□□ -0.57
CSMD2-202ENST00000338325 TUBD1Q9UJT1 453 aa11.52□□□□□ -0.57
CSMD2-202ENST00000338325 PCDHGA3Q9Y5H0 932 aa11.52□□□□□ -0.57
CSMD2-202ENST00000338325 FLNCQ14315 2725 aa11.52□□□□□ -0.57
CSMD2-202ENST00000338325 TEX33O43247 280 aa11.51□□□□□ -0.57
CSMD2-202ENST00000338325 CALB1P05937 261 aa11.51□□□□□ -0.57
CSMD2-202ENST00000338325 FGF3P11487 239 aaPredicted RBP11.51□□□□□ -0.57
CSMD2-202ENST00000338325 MYCLP1P12525 358 aaPredicted RBP11.51□□□□□ -0.57
CSMD2-202ENST00000338325 LIFP15018 202 aa11.51□□□□□ -0.57
CSMD2-202ENST00000338325 HTR7P34969 479 aa11.51□□□□□ -0.57
CSMD2-202ENST00000338325 SOX5P35711 763 aa11.51□□□□□ -0.57
CSMD2-202ENST00000338325 ARSDP51689 593 aa11.51□□□□□ -0.57
CSMD2-202ENST00000338325 NDST2P52849 883 aa11.51□□□□□ -0.57
CSMD2-202ENST00000338325 POLE2P56282 527 aa11.51□□□□□ -0.57
CSMD2-202ENST00000338325 TPI1P60174 286 aa11.51□□□□□ -0.57
CSMD2-202ENST00000338325 BCL2L1Q07817 233 aa11.51□□□□□ -0.57
CSMD2-202ENST00000338325 ILF3Q12906 894 aaKnown RBP eCLIP11.51□□□□□ -0.57
CSMD2-202ENST00000338325 TRA2AQ13595 282 aaKnown RBP eCLIP11.51□□□□□ -0.57
CSMD2-202ENST00000338325 ACOX1Q15067 660 aa11.51□□□□□ -0.57
CSMD2-202ENST00000338325 PNCKQ6P2M8 343 aa11.51□□□□□ -0.57
CSMD2-202ENST00000338325 NRROSQ86YC3 692 aa11.51□□□□□ -0.57
CSMD2-202ENST00000338325 IL22RA1Q8N6P7 574 aa11.51□□□□□ -0.57
CSMD2-202ENST00000338325 PAF1Q8N7H5 531 aa11.51□□□□□ -0.57
CSMD2-202ENST00000338325 TSEN2Q8NCE0 465 aaKnown RBP11.51□□□□□ -0.57
CSMD2-202ENST00000338325 CCDC112Q8NEF3 446 aa11.51□□□□□ -0.57
CSMD2-202ENST00000338325 PMEPA1Q969W9 287 aa11.51□□□□□ -0.57
CSMD2-202ENST00000338325 CDH19Q9H159 772 aa11.51□□□□□ -0.57
CSMD2-202ENST00000338325 EPN3Q9H201 632 aa11.51□□□□□ -0.57
CSMD2-202ENST00000338325 SUDS3Q9H7L9 328 aaPredicted RBP11.51□□□□□ -0.57
CSMD2-202ENST00000338325 CARS2Q9HA77 564 aaKnown RBP11.51□□□□□ -0.57
CSMD2-202ENST00000338325 ANKRD62A6NC57 917 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 ARHGAP42A6NI28 874 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 SIGLEC16A6NMB1 481 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 PALMO75781 387 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 ECEL1O95672 775 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 NTRK1P04629 796 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 FGF1P05230 155 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 ERCC5P28715 1186 aaPredicted RBP11.5□□□□□ -0.57
CSMD2-202ENST00000338325 CD1CP29017 333 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 UGT1A3P35503 534 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 GPR3P46089 330 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 ZNF143P52747 638 aaPredicted RBP11.5□□□□□ -0.57
CSMD2-202ENST00000338325 LIMK2P53671 638 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 JAM2P57087 298 aa11.5□□□□□ -0.57
CSMD2-202ENST00000338325 POLR2LP62875 67 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms