RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 MRM3Q9HC36 420 aaKnown RBP21.57■■□□□ 1.04
TPM1-204ENST00000334895 ARGLU1Q9NWB6 273 aaPredicted RBP21.57■■□□□ 1.04
TPM1-204ENST00000334895 SAMD15Q9P1V8 674 aa21.57■■□□□ 1.04
TPM1-204ENST00000334895 B4GALT6Q9UBX8 382 aa21.57■■□□□ 1.04
TPM1-204ENST00000334895 SCN8AQ9UQD0 1980 aa21.56■■□□□ 1.04
TPM1-204ENST00000334895 FAM237BA0A1B0GVD1 139 aa21.56■■□□□ 1.04
TPM1-204ENST00000334895 TCRBV21S2A2A0A5A6 115 aa21.56■■□□□ 1.04
TPM1-204ENST00000334895 HEATR9A2RTY3 570 aa21.56■■□□□ 1.04
TPM1-204ENST00000334895 A8MX80 341 aa21.56■■□□□ 1.04
TPM1-204ENST00000334895 STK25O00506 426 aa21.56■■□□□ 1.04
TPM1-204ENST00000334895 BUD23O43709 281 aaKnown RBP21.56■■□□□ 1.04
TPM1-204ENST00000334895 TTC4O95801 387 aa21.56■■□□□ 1.04
TPM1-204ENST00000334895 ADRB3P13945 408 aa21.56■■□□□ 1.04
TPM1-204ENST00000334895 NDUFV2P19404 249 aa21.56■■□□□ 1.04
TPM1-204ENST00000334895 P2RY2P41231 377 aa21.56■■□□□ 1.04
TPM1-204ENST00000334895 PTPRCAPQ14761 206 aa21.56■■□□□ 1.04
TPM1-204ENST00000334895 PIP5KL1Q5T9C9 394 aa21.56■■□□□ 1.04
TPM1-204ENST00000334895 STEAP4Q687X5 459 aa21.56■■□□□ 1.04
TPM1-204ENST00000334895 CWF19L1Q69YN2 538 aaKnown RBP21.56■■□□□ 1.04
TPM1-204ENST00000334895 CRTC1Q6UUV9 634 aa21.56■■□□□ 1.04
TPM1-204ENST00000334895 CAPN12Q6ZSI9 719 aa21.56■■□□□ 1.04
TPM1-204ENST00000334895 ERN2Q76MJ5 926 aaKnown RBP21.56■■□□□ 1.04
TPM1-204ENST00000334895 LYSMD3Q7Z3D4 306 aa21.56■■□□□ 1.04
TPM1-204ENST00000334895 GLT6D1Q7Z4J2 308 aa21.56■■□□□ 1.04
TPM1-204ENST00000334895 PTCD2Q8WV60 388 aaKnown RBP21.56■■□□□ 1.04
TPM1-204ENST00000334895 PBXIP1Q96AQ6 731 aa21.56■■□□□ 1.04
TPM1-204ENST00000334895 TREX1Q9NSU2 369 aa21.56■■□□□ 1.04
TPM1-204ENST00000334895 HACD3Q9P035 362 aa21.56■■□□□ 1.04
TPM1-204ENST00000334895 SLC2A6Q9UGQ3 507 aa21.56■■□□□ 1.04
TPM1-204ENST00000334895 GGT7Q9UJ14 662 aa21.56■■□□□ 1.04
TPM1-204ENST00000334895 ITM2BQ9Y287 266 aa21.56■■□□□ 1.04
TPM1-204ENST00000334895 MAGEB16A2A368 324 aa21.55■■□□□ 1.04
TPM1-204ENST00000334895 RIPK2O43353 540 aa21.55■■□□□ 1.04
TPM1-204ENST00000334895 ACSL3O95573 720 aa21.55■■□□□ 1.04
TPM1-204ENST00000334895 GABRG2P18507 467 aa21.55■■□□□ 1.04
TPM1-204ENST00000334895 HSD17B3P37058 310 aa21.55■■□□□ 1.04
TPM1-204ENST00000334895 NEK3P51956 506 aa21.55■■□□□ 1.04
TPM1-204ENST00000334895 ZNF140P52738 457 aaPredicted RBP21.55■■□□□ 1.04
TPM1-204ENST00000334895 RALGDSQ12967 914 aa21.55■■□□□ 1.04
TPM1-204ENST00000334895 CRYMQ14894 314 aa21.55■■□□□ 1.04
TPM1-204ENST00000334895 TAF1AQ15573 450 aaPredicted RBP21.55■■□□□ 1.04
TPM1-204ENST00000334895 ANKRD20A4Q4UJ75 823 aa21.55■■□□□ 1.04
TPM1-204ENST00000334895 AGBL4Q5VU57 503 aa21.55■■□□□ 1.04
TPM1-204ENST00000334895 MICALCLQ6ZW33 695 aa21.55■■□□□ 1.04
TPM1-204ENST00000334895 NAT9Q9BTE0 207 aa21.55■■□□□ 1.04
TPM1-204ENST00000334895 PABPC3Q9H361 631 aaKnown RBP21.55■■□□□ 1.04
TPM1-204ENST00000334895 ARFGAP3Q9NP61 516 aa21.55■■□□□ 1.04
TPM1-204ENST00000334895 SIT1Q9Y3P8 196 aa21.55■■□□□ 1.04
TPM1-204ENST00000334895 RPS6KL1Q9Y6S9 549 aa21.55■■□□□ 1.04
TPM1-204ENST00000334895 C1orf232A0A0U1RR37 186 aa21.55■■□□□ 1.04
TPM1-204ENST00000334895 ZCWPW2A0A1B0GU75 182 aa21.55■■□□□ 1.04
TPM1-204ENST00000334895 AREL1O15033 823 aa21.55■■□□□ 1.04
TPM1-204ENST00000334895 ATG13O75143 517 aa21.55■■□□□ 1.04
TPM1-204ENST00000334895 USP1O94782 785 aa21.55■■□□□ 1.04
TPM1-204ENST00000334895 CLDN7O95471 211 aa21.55■■□□□ 1.04
TPM1-204ENST00000334895 MMP12P39900 470 aa21.55■■□□□ 1.04
TPM1-204ENST00000334895 RPS9P46781 194 aaKnown RBP21.55■■□□□ 1.04
TPM1-204ENST00000334895 FAM193AP78312 1265 aa21.55■■□□□ 1.04
TPM1-204ENST00000334895 TSTD2Q5T7W7 516 aa21.55■■□□□ 1.04
TPM1-204ENST00000334895 ARMC3Q5W041 872 aa21.55■■□□□ 1.04
TPM1-204ENST00000334895 LRRC66Q68CR7 880 aa21.55■■□□□ 1.04
TPM1-204ENST00000334895 ESRP1Q6NXG1 681 aaKnown RBP21.55■■□□□ 1.04
TPM1-204ENST00000334895 FBXL19Q6PCT2 694 aa21.55■■□□□ 1.04
TPM1-204ENST00000334895 CCNJLQ8IV13 435 aa21.55■■□□□ 1.04
TPM1-204ENST00000334895 PALM2Q8IXS6 379 aa21.55■■□□□ 1.04
TPM1-204ENST00000334895 NDUFAF2Q8N183 169 aa21.55■■□□□ 1.04
TPM1-204ENST00000334895 OR13J1Q8NGT2 312 aa21.55■■□□□ 1.04
TPM1-204ENST00000334895 FAM131CQ96AQ9 280 aa21.55■■□□□ 1.04
TPM1-204ENST00000334895 ZNF669Q96BR6 464 aaPredicted RBP21.55■■□□□ 1.04
TPM1-204ENST00000334895 TRABDQ9H4I3 376 aa21.55■■□□□ 1.04
TPM1-204ENST00000334895 DYRK4Q9NR20 520 aa21.55■■□□□ 1.04
TPM1-204ENST00000334895 A0A1W2PP55 124 aa21.54■■□□□ 1.04
TPM1-204ENST00000334895 DYNC1I1O14576 645 aa21.54■■□□□ 1.04
TPM1-204ENST00000334895 SLC4A1P02730 911 aa21.54■■□□□ 1.04
TPM1-204ENST00000334895 DCNP07585 359 aaKnown RBP21.54■■□□□ 1.04
TPM1-204ENST00000334895 XPAP23025 273 aaPredicted RBP21.54■■□□□ 1.04
TPM1-204ENST00000334895 DGKEP52429 567 aa21.54■■□□□ 1.04
TPM1-204ENST00000334895 DPPA4Q7L190 304 aa21.54■■□□□ 1.04
TPM1-204ENST00000334895 UNC5BQ8IZJ1 945 aa21.54■■□□□ 1.04
TPM1-204ENST00000334895 HDDC3Q8N4P3 179 aa21.54■■□□□ 1.04
TPM1-204ENST00000334895 OR13C4Q8NGS5 318 aa21.54■■□□□ 1.04
TPM1-204ENST00000334895 UBLCP1Q8WVY7 318 aaPredicted RBP21.54■■□□□ 1.04
TPM1-204ENST00000334895 SIPA1Q96FS4 1042 aa21.54■■□□□ 1.04
TPM1-204ENST00000334895 TTC25Q96NG3 672 aa21.54■■□□□ 1.04
TPM1-204ENST00000334895 CD93Q9NPY3 652 aa21.54■■□□□ 1.04
TPM1-204ENST00000334895 CCL22O00626 93 aa21.53■■□□□ 1.04
TPM1-204ENST00000334895 GPR37L1O60883 481 aa21.53■■□□□ 1.04
TPM1-204ENST00000334895 PAPSS2O95340 614 aaPredicted RBP21.53■■□□□ 1.04
TPM1-204ENST00000334895 CRTAMO95727 393 aa21.53■■□□□ 1.04
TPM1-204ENST00000334895 DNTTP04053 509 aa21.53■■□□□ 1.04
TPM1-204ENST00000334895 POLBP06746 335 aa21.53■■□□□ 1.04
TPM1-204ENST00000334895 PSMA3P25788 255 aa21.53■■□□□ 1.04
TPM1-204ENST00000334895 ARNTP27540 789 aa21.53■■□□□ 1.04
TPM1-204ENST00000334895 VIPR1P32241 457 aa21.53■■□□□ 1.04
TPM1-204ENST00000334895 TAS2R38P59533 333 aa21.53■■□□□ 1.04
TPM1-204ENST00000334895 ACVR1Q04771 509 aa21.53■■□□□ 1.04
TPM1-204ENST00000334895 CNGA3Q16281 694 aa21.53■■□□□ 1.04
TPM1-204ENST00000334895 TRMT10BQ6PF06 316 aaKnown RBP21.53■■□□□ 1.04
TPM1-204ENST00000334895 C3orf62Q6ZUJ4 267 aa21.53■■□□□ 1.04
TPM1-204ENST00000334895 DNAJC1Q96KC8 554 aaKnown RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms