RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 A0A1W2PQ45 241 aaPredicted RBP18.97■□□□□ 0.63
RFTN1-201ENST00000334133 A0A1W2PQY0 241 aa18.97■□□□□ 0.63
RFTN1-201ENST00000334133 CAPN8A6NHC0 703 aa18.97■□□□□ 0.63
RFTN1-201ENST00000334133 INPPL1O15357 1258 aa18.97■□□□□ 0.63
RFTN1-201ENST00000334133 CD3EAPO15446 510 aaKnown RBP18.97■□□□□ 0.63
RFTN1-201ENST00000334133 IRF1P10914 325 aa18.97■□□□□ 0.63
RFTN1-201ENST00000334133 ATF6P18850 670 aa18.97■□□□□ 0.63
RFTN1-201ENST00000334133 SP3Q02447 781 aa18.97■□□□□ 0.63
RFTN1-201ENST00000334133 IL10RBQ08334 325 aa18.97■□□□□ 0.63
RFTN1-201ENST00000334133 GEN1Q17RS7 908 aa18.97■□□□□ 0.63
RFTN1-201ENST00000334133 AGKQ53H12 422 aa18.97■□□□□ 0.63
RFTN1-201ENST00000334133 FUT10Q6P4F1 479 aa18.97■□□□□ 0.63
RFTN1-201ENST00000334133 C16orf89Q6UX73 402 aa18.97■□□□□ 0.63
RFTN1-201ENST00000334133 DENND1CQ8IV53 801 aa18.97■□□□□ 0.63
RFTN1-201ENST00000334133 CD99L2Q8TCZ2 262 aa18.97■□□□□ 0.63
RFTN1-201ENST00000334133 STK39Q9UEW8 545 aa18.97■□□□□ 0.63
RFTN1-201ENST00000334133 LOC285095A0A1B0GVY8 99 aa18.97■□□□□ 0.63
RFTN1-201ENST00000334133 ENO4A6NNW6 628 aa18.97■□□□□ 0.63
RFTN1-201ENST00000334133 SLCO1B7G3V0H7 640 aa18.97■□□□□ 0.63
RFTN1-201ENST00000334133 ENPP3O14638 875 aa18.97■□□□□ 0.63
RFTN1-201ENST00000334133 SLC7A4O43246 635 aa18.97■□□□□ 0.63
RFTN1-201ENST00000334133 GLP2RO95838 553 aa18.97■□□□□ 0.63
RFTN1-201ENST00000334133 CDKN1CP49918 316 aaPredicted RBP18.97■□□□□ 0.63
RFTN1-201ENST00000334133 SGSHP51688 502 aa18.97■□□□□ 0.63
RFTN1-201ENST00000334133 LCA5Q86VQ0 697 aa18.97■□□□□ 0.63
RFTN1-201ENST00000334133 PDCD6IPQ8WUM4 868 aaKnown RBP18.97■□□□□ 0.63
RFTN1-201ENST00000334133 BHMTQ93088 406 aa18.97■□□□□ 0.63
RFTN1-201ENST00000334133 RMDN1Q96DB5 314 aa18.97■□□□□ 0.63
RFTN1-201ENST00000334133 ZNF512Q96ME7 567 aaPredicted RBP18.97■□□□□ 0.63
RFTN1-201ENST00000334133 NSUN5Q96P11 429 aaKnown RBP18.97■□□□□ 0.63
RFTN1-201ENST00000334133 GCNAQ96QF7 691 aa18.97■□□□□ 0.63
RFTN1-201ENST00000334133 MFSD1Q9H3U5 465 aa18.97■□□□□ 0.63
RFTN1-201ENST00000334133 PIDD1Q9HB75 910 aa18.97■□□□□ 0.63
RFTN1-201ENST00000334133 TSR3Q9UJK0 312 aaKnown RBP18.97■□□□□ 0.63
RFTN1-201ENST00000334133 TMEM189-UBE2V1I3L0A0 370 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 UBXN8O00124 270 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 SYN3O14994 580 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 PMLP29590 882 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 KPNA2P52292 529 aaKnown RBP18.96■□□□□ 0.63
RFTN1-201ENST00000334133 RALGDSQ12967 914 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 ZNF423Q2M1K9 1284 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 LRRC8DQ7L1W4 858 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 C16orf59Q7L2K0 433 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 PDSS2Q86YH6 399 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 CPSF7Q8N684 471 aaKnown RBP18.96■□□□□ 0.63
RFTN1-201ENST00000334133 C3orf30Q96M34 536 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 SLC39A3Q9BRY0 314 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 KLHL4Q9C0H6 718 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 GSTO2Q9H4Y5 243 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 EFCAB1Q9HAE3 211 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 SPO11Q9Y5K1 396 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 F5H5T6 163 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 H3BMM5 538 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 PRAMEF11O60813 436 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 LYNP07948 512 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 POLD2P49005 469 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 PFKFB4Q16877 469 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 MMEL1Q495T6 779 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 PIGGQ5H8A4 983 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 OR52E8Q6IFG1 317 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 JADE3Q92613 823 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 TSPAN17Q96FV3 270 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 KCNA7Q96RP8 456 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 CCDC28BQ9BUN5 200 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 PCDHAC1Q9H158 963 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 COPS7BQ9H9Q2 264 aaPredicted RBP18.96■□□□□ 0.63
RFTN1-201ENST00000334133 TMEM161AQ9NX61 479 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 DONSONQ9NYP3 566 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 TRPC5OSA6NMA1 111 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 DRGXA6NNA5 263 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 GPC4O75487 556 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 PAX3P23760 479 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 MAGEA11P43364 429 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 TIAL1Q01085 375 aaKnown RBP eCLIP18.96■□□□□ 0.63
RFTN1-201ENST00000334133 MRPL58Q14197 206 aaKnown RBP18.96■□□□□ 0.63
RFTN1-201ENST00000334133 GPNMBQ14956 572 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 ACAP2Q15057 778 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 CASD1Q96PB1 797 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 ZBED2Q9BTP6 218 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 VCXQ9H320 206 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 GMPR2Q9P2T1 348 aaKnown RBP18.96■□□□□ 0.63
RFTN1-201ENST00000334133 TRAF6Q9Y4K3 522 aa18.96■□□□□ 0.63
RFTN1-201ENST00000334133 RBP1P09455 135 aa18.95■□□□□ 0.62
RFTN1-201ENST00000334133 FMO4P31512 558 aa18.95■□□□□ 0.62
RFTN1-201ENST00000334133 DNAJB13P59910 316 aa18.95■□□□□ 0.62
RFTN1-201ENST00000334133 OR4D1Q15615 310 aa18.95■□□□□ 0.62
RFTN1-201ENST00000334133 PITRM1Q5JRX3 1037 aa18.95■□□□□ 0.62
RFTN1-201ENST00000334133 LINGO4Q6UY18 593 aa18.95■□□□□ 0.62
RFTN1-201ENST00000334133 PTGR2Q8N8N7 351 aaPredicted RBP18.95■□□□□ 0.62
RFTN1-201ENST00000334133 RANBP9Q96S59 729 aa18.95■□□□□ 0.62
RFTN1-201ENST00000334133 IL37Q9NZH6 218 aa18.95■□□□□ 0.62
RFTN1-201ENST00000334133 LRFN2Q9ULH4 789 aa18.95■□□□□ 0.62
RFTN1-201ENST00000334133 PCDHGC4Q9Y5F7 938 aa18.95■□□□□ 0.62
RFTN1-201ENST00000334133 NCF1BA6NI72 391 aaPredicted RBP18.95■□□□□ 0.62
RFTN1-201ENST00000334133 TBKBP1A7MCY6 615 aa18.95■□□□□ 0.62
RFTN1-201ENST00000334133 NCF1CA8MVU1 366 aaPredicted RBP18.95■□□□□ 0.62
RFTN1-201ENST00000334133 UBDO15205 165 aa18.95■□□□□ 0.62
RFTN1-201ENST00000334133 GPR39O43194 453 aa18.95■□□□□ 0.62
RFTN1-201ENST00000334133 NCF1P14598 390 aaPredicted RBP18.95■□□□□ 0.62
RFTN1-201ENST00000334133 FOXA1P55317 472 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms