RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 ARNT2Q9HBZ2 717 aa16.56■□□□□ 0.24
SHOX-201ENST00000334060 SAYSD1Q9NPB0 183 aa16.56■□□□□ 0.24
SHOX-201ENST00000334060 FAM114A2Q9NRY5 505 aa16.56■□□□□ 0.24
SHOX-201ENST00000334060 SPATA6Q9NWH7 488 aaPredicted RBP16.56■□□□□ 0.24
SHOX-201ENST00000334060 BCCIPQ9P287 314 aaKnown RBP eCLIP16.56■□□□□ 0.24
SHOX-201ENST00000334060 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.56■□□□□ 0.24
SHOX-201ENST00000334060 AREL1O15033 823 aa16.55■□□□□ 0.24
SHOX-201ENST00000334060 ALOX15BO15296 676 aa16.55■□□□□ 0.24
SHOX-201ENST00000334060 C1SP09871 688 aa16.55■□□□□ 0.24
SHOX-201ENST00000334060 MAPK8P45983 427 aa16.55■□□□□ 0.24
SHOX-201ENST00000334060 PTSQ03393 145 aa16.55■□□□□ 0.24
SHOX-201ENST00000334060 CNGA3Q16281 694 aa16.55■□□□□ 0.24
SHOX-201ENST00000334060 HIF1AQ16665 826 aa16.55■□□□□ 0.24
SHOX-201ENST00000334060 RALGPS1Q5JS13 557 aa16.55■□□□□ 0.24
SHOX-201ENST00000334060 CFAP58Q5T655 872 aa16.55■□□□□ 0.24
SHOX-201ENST00000334060 FBXL19Q6PCT2 694 aa16.55■□□□□ 0.24
SHOX-201ENST00000334060 C4orf22Q6V702 233 aa16.55■□□□□ 0.24
SHOX-201ENST00000334060 HSD11B1LQ7Z5J1 315 aa16.55■□□□□ 0.24
SHOX-201ENST00000334060 ZBED8Q8IZ13 594 aa16.55■□□□□ 0.24
SHOX-201ENST00000334060 GPR161Q8N6U8 529 aaKnown RBP16.55■□□□□ 0.24
SHOX-201ENST00000334060 GEMIN8Q9NWZ8 242 aaKnown RBP16.55■□□□□ 0.24
SHOX-201ENST00000334060 ZNF711Q9Y462 761 aa16.55■□□□□ 0.24
SHOX-201ENST00000334060 SDK1Q7Z5N4 2213 aa16.55■□□□□ 0.24
SHOX-201ENST00000334060 C1orf232A0A0U1RR37 186 aa16.55■□□□□ 0.24
SHOX-201ENST00000334060 CAPN8A6NHC0 703 aa16.55■□□□□ 0.24
SHOX-201ENST00000334060 MMP20O60882 483 aa16.55■□□□□ 0.24
SHOX-201ENST00000334060 DNTTP04053 509 aa16.55■□□□□ 0.24
SHOX-201ENST00000334060 HLA-DPA1P20036 260 aa16.55■□□□□ 0.24
SHOX-201ENST00000334060 CES1P23141 567 aa16.55■□□□□ 0.24
SHOX-201ENST00000334060 MMP12P39900 470 aa16.55■□□□□ 0.24
SHOX-201ENST00000334060 DGKEP52429 567 aa16.55■□□□□ 0.24
SHOX-201ENST00000334060 FGL2Q14314 439 aa16.55■□□□□ 0.24
SHOX-201ENST00000334060 ESRP1Q6NXG1 681 aaKnown RBP16.55■□□□□ 0.24
SHOX-201ENST00000334060 FBXO36Q8NEA4 188 aa16.55■□□□□ 0.24
SHOX-201ENST00000334060 SCRN2Q96FV2 425 aa16.55■□□□□ 0.24
SHOX-201ENST00000334060 DNAJC1Q96KC8 554 aaKnown RBP16.55■□□□□ 0.24
SHOX-201ENST00000334060 MCCC1Q96RQ3 725 aaPredicted RBP16.55■□□□□ 0.24
SHOX-201ENST00000334060 FMO2Q99518 471 aa16.55■□□□□ 0.24
SHOX-201ENST00000334060 ZFR2Q9UPR6 939 aaKnown RBP16.55■□□□□ 0.24
SHOX-201ENST00000334060 FADS3Q9Y5Q0 445 aa16.55■□□□□ 0.24
SHOX-201ENST00000334060 MAD1L1Q9Y6D9 718 aa16.55■□□□□ 0.24
SHOX-201ENST00000334060 SCN8AQ9UQD0 1980 aa16.54■□□□□ 0.24
SHOX-201ENST00000334060 ERI2A8K979 691 aaKnown RBP16.54■□□□□ 0.24
SHOX-201ENST00000334060 C1QTNF3-AMACRE9PGA6 284 aa16.54■□□□□ 0.24
SHOX-201ENST00000334060 FGF1P05230 155 aa16.54■□□□□ 0.24
SHOX-201ENST00000334060 ALADP13716 330 aa16.54■□□□□ 0.24
SHOX-201ENST00000334060 C5AR1P21730 350 aa16.54■□□□□ 0.24
SHOX-201ENST00000334060 MAT2AP31153 395 aaKnown RBP16.54■□□□□ 0.24
SHOX-201ENST00000334060 GRIA4P48058 902 aa16.54■□□□□ 0.24
SHOX-201ENST00000334060 NEK3P51956 506 aa16.54■□□□□ 0.24
SHOX-201ENST00000334060 ADPRHP54922 357 aa16.54■□□□□ 0.24
SHOX-201ENST00000334060 GPX6P59796 221 aa16.54■□□□□ 0.24
SHOX-201ENST00000334060 SLC14A2Q15849 920 aa16.54■□□□□ 0.24
SHOX-201ENST00000334060 TRMT10BQ6PF06 316 aaKnown RBP16.54■□□□□ 0.24
SHOX-201ENST00000334060 BRAT1Q6PJG6 821 aa16.54■□□□□ 0.24
SHOX-201ENST00000334060 OR13J1Q8NGT2 312 aa16.54■□□□□ 0.24
SHOX-201ENST00000334060 OR14C36Q8NHC7 312 aa16.54■□□□□ 0.24
SHOX-201ENST00000334060 CFAP36Q96G28 342 aa16.54■□□□□ 0.24
SHOX-201ENST00000334060 OMDQ99983 421 aa16.54■□□□□ 0.24
SHOX-201ENST00000334060 OSBPL1AQ9BXW6 950 aa16.54■□□□□ 0.24
SHOX-201ENST00000334060 ABCG8Q9H221 673 aa16.54■□□□□ 0.24
SHOX-201ENST00000334060 EPB41L4BQ9H329 900 aa16.54■□□□□ 0.24
SHOX-201ENST00000334060 SEMA4AQ9H3S1 761 aa16.54■□□□□ 0.24
SHOX-201ENST00000334060 DKK3Q9UBP4 350 aa16.54■□□□□ 0.24
SHOX-201ENST00000334060 RAB21Q9UL25 225 aa16.54■□□□□ 0.24
SHOX-201ENST00000334060 PHTF1Q9UMS5 762 aa16.54■□□□□ 0.24
SHOX-201ENST00000334060 TEX264Q9Y6I9 313 aa16.54■□□□□ 0.24
SHOX-201ENST00000334060 E7ESA3 106 aa16.53■□□□□ 0.24
SHOX-201ENST00000334060 EPOP01588 193 aa16.53■□□□□ 0.24
SHOX-201ENST00000334060 ARNTP27540 789 aa16.53■□□□□ 0.24
SHOX-201ENST00000334060 SSTR1P30872 391 aa16.53■□□□□ 0.24
SHOX-201ENST00000334060 ETV3P41162 512 aa16.53■□□□□ 0.24
SHOX-201ENST00000334060 CXCL12P48061 93 aa16.53■□□□□ 0.24
SHOX-201ENST00000334060 HSF5Q4G112 596 aaPredicted RBP16.53■□□□□ 0.24
SHOX-201ENST00000334060 WDR93Q6P2C0 686 aa16.53■□□□□ 0.24
SHOX-201ENST00000334060 CASC4Q6P4E1 433 aa16.53■□□□□ 0.24
SHOX-201ENST00000334060 GLT6D1Q7Z4J2 308 aa16.53■□□□□ 0.24
SHOX-201ENST00000334060 PCGF5Q86SE9 256 aa16.53■□□□□ 0.24
SHOX-201ENST00000334060 RASSF3Q86WH2 238 aa16.53■□□□□ 0.24
SHOX-201ENST00000334060 LRIG1Q96JA1 1093 aa16.53■□□□□ 0.24
SHOX-201ENST00000334060 MYOCQ99972 504 aa16.53■□□□□ 0.24
SHOX-201ENST00000334060 ADGRE3Q9BY15 652 aa16.53■□□□□ 0.24
SHOX-201ENST00000334060 EBF2Q9HAK2 575 aa16.53■□□□□ 0.24
SHOX-201ENST00000334060 FZD3Q9NPG1 666 aa16.53■□□□□ 0.24
SHOX-201ENST00000334060 CA5BQ9Y2D0 317 aa16.53■□□□□ 0.24
SHOX-201ENST00000334060 PPIL1Q9Y3C6 166 aa16.53■□□□□ 0.24
SHOX-201ENST00000334060 GON4LQ3T8J9 2241 aa16.53■□□□□ 0.24
SHOX-201ENST00000334060 VGLL3A8MV65 326 aa16.53■□□□□ 0.24
SHOX-201ENST00000334060 RNASEH1O60930 286 aaKnown RBP16.53■□□□□ 0.24
SHOX-201ENST00000334060 ADH1BP00325 375 aa16.53■□□□□ 0.24
SHOX-201ENST00000334060 TUBBP07437 444 aa16.53■□□□□ 0.24
SHOX-201ENST00000334060 TDGF1P13385 188 aa16.53■□□□□ 0.24
SHOX-201ENST00000334060 BCKDHBP21953 392 aa16.53■□□□□ 0.24
SHOX-201ENST00000334060 CDKN1CP49918 316 aaPredicted RBP16.53■□□□□ 0.24
SHOX-201ENST00000334060 CUL1Q13616 776 aa16.53■□□□□ 0.24
SHOX-201ENST00000334060 EFTUD2Q15029 972 aaKnown RBP eCLIP16.53■□□□□ 0.24
SHOX-201ENST00000334060 KYNUQ16719 465 aa16.53■□□□□ 0.24
SHOX-201ENST00000334060 CCDC70Q6NSX1 233 aa16.53■□□□□ 0.24
SHOX-201ENST00000334060 DSG4Q86SJ6 1040 aa16.53■□□□□ 0.24
SHOX-201ENST00000334060 SCAMP4Q969E2 229 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms