RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 MTRRQ9UBK8 725 aa11.25□□□□□ -0.61
POLR1B-202ENST00000333990 ENTPD4Q9Y227 616 aa11.25□□□□□ -0.61
POLR1B-202ENST00000333990 FCF1Q9Y324 198 aaKnown RBP11.25□□□□□ -0.61
POLR1B-202ENST00000333990 ABCA3Q99758 1704 aa11.25□□□□□ -0.61
POLR1B-202ENST00000333990 MYH8P13535 1937 aa11.25□□□□□ -0.61
POLR1B-202ENST00000333990 MYH11P35749 1972 aa11.25□□□□□ -0.61
POLR1B-202ENST00000333990 HAS3O00219 553 aa11.25□□□□□ -0.61
POLR1B-202ENST00000333990 SLC7A4O43246 635 aa11.25□□□□□ -0.61
POLR1B-202ENST00000333990 CPSF4O95639 269 aaKnown RBP11.25□□□□□ -0.61
POLR1B-202ENST00000333990 RPSAP08865 295 aaKnown RBP11.25□□□□□ -0.61
POLR1B-202ENST00000333990 PSMA4P25789 261 aaKnown RBP11.25□□□□□ -0.61
POLR1B-202ENST00000333990 CSKP41240 450 aa11.25□□□□□ -0.61
POLR1B-202ENST00000333990 CPA2P48052 419 aa11.25□□□□□ -0.61
POLR1B-202ENST00000333990 INPP1P49441 399 aa11.25□□□□□ -0.61
POLR1B-202ENST00000333990 CHRNB3Q05901 458 aa11.25□□□□□ -0.61
POLR1B-202ENST00000333990 UBXN2BQ14CS0 331 aa11.25□□□□□ -0.61
POLR1B-202ENST00000333990 HLA-DQA1Q5Y7H0 255 aa11.25□□□□□ -0.61
POLR1B-202ENST00000333990 IL27RAQ6UWB1 636 aa11.25□□□□□ -0.61
POLR1B-202ENST00000333990 TMEM40Q8WWA1 233 aa11.25□□□□□ -0.61
POLR1B-202ENST00000333990 LINGO1Q96FE5 620 aa11.25□□□□□ -0.61
POLR1B-202ENST00000333990 ZNF514Q96K75 400 aaPredicted RBP11.25□□□□□ -0.61
POLR1B-202ENST00000333990 BBS4Q96RK4 519 aa11.25□□□□□ -0.61
POLR1B-202ENST00000333990 OSBPL1AQ9BXW6 950 aa11.25□□□□□ -0.61
POLR1B-202ENST00000333990 GPR62Q9BZJ7 368 aa11.25□□□□□ -0.61
POLR1B-202ENST00000333990 SNX15Q9NRS6 342 aa11.25□□□□□ -0.61
POLR1B-202ENST00000333990 ATAD3AQ9NVI7 634 aa11.25□□□□□ -0.61
POLR1B-202ENST00000333990 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.24□□□□□ -0.61
POLR1B-202ENST00000333990 MYO1GB0I1T2 1018 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 ISM1B1AKI9 464 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 H3BM21 787 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 ULK1O75385 1050 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 OAZ2O95190 189 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 TFE3P19532 575 aaPredicted RBP11.24□□□□□ -0.61
POLR1B-202ENST00000333990 TCN1P20061 433 aaPredicted RBP11.24□□□□□ -0.61
POLR1B-202ENST00000333990 GABRB2P47870 512 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 RABGGTBP53611 331 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 USP4Q13107 963 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 C16orf46Q6P387 395 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 VITQ6UXI7 678 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 MIER2Q8N344 545 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 PPP3R2Q96LZ3 170 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 KLHL32Q96NJ5 620 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 FAIM2Q9BWQ8 316 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 CDH19Q9H159 772 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 SOHLH2Q9NX45 425 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.24□□□□□ -0.61
POLR1B-202ENST00000333990 TULP2O00295 520 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 BIRC5O15392 142 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 CCNDBP1O95273 360 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 ATXN1P54253 815 aaKnown RBP11.24□□□□□ -0.61
POLR1B-202ENST00000333990 CBX2Q14781 532 aaPredicted RBP11.24□□□□□ -0.61
POLR1B-202ENST00000333990 TEAD4Q15561 434 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 TMEM259Q4ZIN3 620 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 TSTD2Q5T7W7 516 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 BBS7Q8IWZ6 715 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 FAM126BQ8IXS8 530 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 RPL10LQ96L21 214 aaKnown RBP11.24□□□□□ -0.61
POLR1B-202ENST00000333990 NECTIN4Q96NY8 510 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 SLC25A23Q9BV35 468 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 HERC2P3Q9BVR0 1158 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 SEMA4BQ9NPR2 832 aaPredicted RBP11.24□□□□□ -0.61
POLR1B-202ENST00000333990 INTS7Q9NVH2 962 aaKnown RBP11.24□□□□□ -0.61
POLR1B-202ENST00000333990 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.24□□□□□ -0.61
POLR1B-202ENST00000333990 TEKT2Q9UIF3 430 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 BLOC1S6Q9UL45 172 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 NDUFAF1Q9Y375 327 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 NR2E1Q9Y466 385 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 SNX10Q9Y5X0 201 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 MAST2Q6P0Q8 1798 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 ADAMTS7Q9UKP4 1686 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 FAM47E-STBD1D6RA91 191 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 AVILO75366 819 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 PRAMEF1O95521 474 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 MT-CO1P00395 513 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 S100A3P33764 101 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 SOX4Q06945 474 aaPredicted RBP11.24□□□□□ -0.61
POLR1B-202ENST00000333990 TCEA2Q15560 299 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 CA9Q16790 459 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 CNSTQ6PJW8 725 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 CRTC3Q6UUV7 619 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 C15orf39Q6ZRI6 1047 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 SYT12Q8IV01 421 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 PARP9Q8IXQ6 854 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 LRRN4CLQ8ND94 238 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 KCTD4Q8WVF5 259 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 SORCS3Q9UPU3 1222 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 LRP5O75197 1615 aa11.24□□□□□ -0.61
POLR1B-202ENST00000333990 ABRQ12979 859 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 FRG1Q14331 258 aaKnown RBP11.23□□□□□ -0.61
POLR1B-202ENST00000333990 CYP1B1Q16678 543 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 RNASEH2BQ5TBB1 312 aaKnown RBP11.23□□□□□ -0.61
POLR1B-202ENST00000333990 CYP20A1Q6UW02 462 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 GALNT13Q8IUC8 556 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 FLCNQ8NFG4 579 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 SPATA22Q8NHS9 363 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 SLC35B2Q8TB61 432 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 CENPTQ96BT3 561 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 TBATAQ96M53 351 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 NEUROG2Q9H2A3 272 aa11.23□□□□□ -0.61
POLR1B-202ENST00000333990 CAPN10Q9HC96 672 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms