RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 WBP11Q9Y2W2 641 aaKnown RBP11.9□□□□□ -0.5
SHMT2-201ENST00000328923 SNX8Q9Y5X2 465 aa11.9□□□□□ -0.5
SHMT2-201ENST00000328923 MAGEB16A2A368 324 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 FAM149AA5PLN7 773 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 SEC24AO95486 1093 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 HLA-DRAP01903 254 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 PRKCBP05771 671 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 PGRP06401 933 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 CYP2A7P20853 494 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 NFE2L1Q14494 772 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 TFDP3Q5H9I0 405 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 TMEM65Q6PI78 240 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 ARSKQ6UWY0 536 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 NDUFAF2Q8N183 169 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 LRRC71Q8N4P6 559 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 FAM71DQ8N9W8 422 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 OR7D4Q8NG98 312 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 FEZF2Q8TBJ5 459 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 MCRS1Q96EZ8 462 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 HSFY1Q96LI6 401 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 UHRF1Q96T88 793 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-201ENST00000328923 PNPLA8Q9NP80 782 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 ZNF70Q9UC06 446 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-201ENST00000328923 RGSL1A5PLK6 1076 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 KRT87PA6NCN2 255 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 M0R3G1 203 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 TLR3O15455 904 aaKnown RBP11.89□□□□□ -0.51
SHMT2-201ENST00000328923 PRKD3O94806 890 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 VNN1O95497 513 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 GSRP00390 522 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 RALBP11234 206 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 SLC7A1P30825 629 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 GARSP41250 739 aaKnown RBP11.89□□□□□ -0.51
SHMT2-201ENST00000328923 NR2C2P49116 596 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 NPY2RP49146 381 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 NOMO3P69849 1222 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 ZNF267Q14586 743 aaPredicted RBP11.89□□□□□ -0.51
SHMT2-201ENST00000328923 BROXQ5VW32 411 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 PLA2G4FQ68DD2 849 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 PAGE2Q7Z2X7 111 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 AMIGO1Q86WK6 493 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 LDHDQ86WU2 507 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 FAM9CQ8IZT9 166 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 NLGN4XQ8N0W4 816 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 AADATQ8N5Z0 425 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 OR4M2Q8NGB6 313 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 OR4M1Q8NGD0 313 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 SEPT8Q92599 483 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 ASB9Q96DX5 294 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 GMCL1Q96IK5 515 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 MFSD14AQ96MC6 490 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 OR52B2Q96RD2 323 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 C1orf112Q9NSG2 853 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 FAM105AQ9NUU6 356 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 EIF3KQ9UBQ5 218 aaKnown RBP11.89□□□□□ -0.51
SHMT2-201ENST00000328923 DPP7Q9UHL4 492 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 ZNRF3Q9ULT6 936 aa11.89□□□□□ -0.51
SHMT2-201ENST00000328923 TRPC5OSA6NMA1 111 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 CXorf49A8MYA2 514 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-201ENST00000328923 KBTBD13C9JR72 458 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 TRIM38O00635 465 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 SLC4A1P02730 911 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 ZNF250P15622 560 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 DDCP20711 480 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 IL12AP29459 219 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 DDOSTP39656 456 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 ELK3P41970 407 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 UBE3AQ05086 875 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 ART3Q13508 389 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 MAPRE2Q15555 327 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 TBRG1Q3YBR2 411 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 CCNYL2Q5T2Q4 361 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 NOXA1Q86UR1 476 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 PIGZQ86VD9 579 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 CAMK1DQ8IU85 385 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 CBWD2Q8IUF1 395 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 UBQLNLQ8IYU4 475 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 METTL4Q8N3J2 472 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 PJA1Q8NG27 643 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 PNPT1Q8TCS8 783 aaKnown RBP11.88□□□□□ -0.51
SHMT2-201ENST00000328923 MAPK15Q8TD08 544 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 INTS12Q96CB8 462 aaKnown RBP11.88□□□□□ -0.51
SHMT2-201ENST00000328923 PPP1R36Q96LQ0 422 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 SECISBP2Q96T21 854 aaKnown RBP11.88□□□□□ -0.51
SHMT2-201ENST00000328923 DSN1Q9H410 356 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 COG4Q9H9E3 785 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 NPAP1Q9NZP6 1156 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 XPO7Q9UIA9 1087 aaKnown RBP11.88□□□□□ -0.51
SHMT2-201ENST00000328923 RNF103-CHMP3A0A140T963 221 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 AVILO75366 819 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 SERPINI2O75830 405 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 TMEM63AO94886 807 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 NDUFB10O96000 172 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 P4HBP07237 508 aaKnown RBP11.88□□□□□ -0.51
SHMT2-201ENST00000328923 YES1P07947 543 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 BMP2P12643 396 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 CDKN2BP42772 138 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 MAPK12P53778 367 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 SLC12A2P55011 1212 aa11.88□□□□□ -0.51
SHMT2-201ENST00000328923 SQLEQ14534 574 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms