RNA–Protein interactions for RNA: ENST00000328839.3

PPP4R4-202, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

TSL 1 (best) BASIC

Gene PPP4R4, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-202ENST00000328839 TMEM168Q9H0V1 697 aa25.14■■□□□ 1.62
PPP4R4-202ENST00000328839 DPEP2Q9H4A9 486 aa25.14■■□□□ 1.62
PPP4R4-202ENST00000328839 SUDS3Q9H7L9 328 aaPredicted RBP25.14■■□□□ 1.62
PPP4R4-202ENST00000328839 CYP4F12Q9HCS2 524 aa25.14■■□□□ 1.62
PPP4R4-202ENST00000328839 ATXN7L1Q9ULK2 861 aaPredicted RBP25.14■■□□□ 1.62
PPP4R4-202ENST00000328839 CFAP46Q8IYW2 2715 aa25.14■■□□□ 1.62
PPP4R4-202ENST00000328839 ARHGEF17Q96PE2 2063 aaPredicted RBP25.14■■□□□ 1.61
PPP4R4-202ENST00000328839 TEX33O43247 280 aa25.13■■□□□ 1.61
PPP4R4-202ENST00000328839 MIPP30301 263 aa25.13■■□□□ 1.61
PPP4R4-202ENST00000328839 NCAPHQ15003 741 aa25.13■■□□□ 1.61
PPP4R4-202ENST00000328839 SFTPA2Q8IWL1 248 aa25.13■■□□□ 1.61
PPP4R4-202ENST00000328839 TRIM7Q9C029 511 aa25.13■■□□□ 1.61
PPP4R4-202ENST00000328839 HSD3B7Q9H2F3 369 aa25.13■■□□□ 1.61
PPP4R4-202ENST00000328839 WDR26Q9H7D7 661 aa25.13■■□□□ 1.61
PPP4R4-202ENST00000328839 TTC24A2A3L6 582 aaPredicted RBP25.12■■□□□ 1.61
PPP4R4-202ENST00000328839 LRRC53A6NM62 1247 aa25.12■■□□□ 1.61
PPP4R4-202ENST00000328839 GLB1P16278 677 aa25.12■■□□□ 1.61
PPP4R4-202ENST00000328839 CCKBRP32239 447 aa25.12■■□□□ 1.61
PPP4R4-202ENST00000328839 RENBPP51606 427 aa25.12■■□□□ 1.61
PPP4R4-202ENST00000328839 AP1S1P61966 158 aa25.12■■□□□ 1.61
PPP4R4-202ENST00000328839 NSUN2Q08J23 767 aaKnown RBP eCLIP25.12■■□□□ 1.61
PPP4R4-202ENST00000328839 ARHGEF7Q14155 803 aa25.12■■□□□ 1.61
PPP4R4-202ENST00000328839 ASIC2Q16515 512 aa25.12■■□□□ 1.61
PPP4R4-202ENST00000328839 C14orf28Q4W4Y0 310 aa25.12■■□□□ 1.61
PPP4R4-202ENST00000328839 CERCAMQ5T4B2 595 aa25.12■■□□□ 1.61
PPP4R4-202ENST00000328839 CCL4L1Q8NHW4 92 aa25.12■■□□□ 1.61
PPP4R4-202ENST00000328839 PDCD6IPQ8WUM4 868 aaKnown RBP25.12■■□□□ 1.61
PPP4R4-202ENST00000328839 GBP4Q96PP9 640 aa25.12■■□□□ 1.61
PPP4R4-202ENST00000328839 SYT11Q9BT88 431 aa25.12■■□□□ 1.61
PPP4R4-202ENST00000328839 LGR4Q9BXB1 951 aa25.12■■□□□ 1.61
PPP4R4-202ENST00000328839 LRIT1Q9P2V4 623 aa25.12■■□□□ 1.61
PPP4R4-202ENST00000328839 B4GALT6Q9UBX8 382 aa25.12■■□□□ 1.61
PPP4R4-202ENST00000328839 SEPT3Q9UH03 358 aa25.12■■□□□ 1.61
PPP4R4-202ENST00000328839 LOXL2Q9Y4K0 774 aa25.12■■□□□ 1.61
PPP4R4-202ENST00000328839 PCDHGA7Q9Y5G6 932 aa25.12■■□□□ 1.61
PPP4R4-202ENST00000328839 RNF215Q9Y6U7 377 aa25.12■■□□□ 1.61
PPP4R4-202ENST00000328839 TMEM191CA6NGB0 347 aa25.11■■□□□ 1.61
PPP4R4-202ENST00000328839 J3QKU1 62 aa25.11■■□□□ 1.61
PPP4R4-202ENST00000328839 TRAFD1O14545 582 aaPredicted RBP25.11■■□□□ 1.61
PPP4R4-202ENST00000328839 NOBOXO60393 691 aa25.11■■□□□ 1.61
PPP4R4-202ENST00000328839 ZNF235Q14590 738 aa25.11■■□□□ 1.61
PPP4R4-202ENST00000328839 LBRQ14739 615 aaKnown RBP25.11■■□□□ 1.61
PPP4R4-202ENST00000328839 TMCO4Q5TGY1 634 aa25.11■■□□□ 1.61
PPP4R4-202ENST00000328839 DENND2CQ68D51 928 aa25.11■■□□□ 1.61
PPP4R4-202ENST00000328839 SPECC1LQ69YQ0 1117 aa25.11■■□□□ 1.61
PPP4R4-202ENST00000328839 PNCKQ6P2M8 343 aa25.11■■□□□ 1.61
PPP4R4-202ENST00000328839 TP53INP2Q8IXH6 220 aa25.11■■□□□ 1.61
PPP4R4-202ENST00000328839 NUS1Q96E22 293 aa25.11■■□□□ 1.61
PPP4R4-202ENST00000328839 CWC15Q9P013 229 aaKnown RBP25.11■■□□□ 1.61
PPP4R4-202ENST00000328839 CNOT8Q9UFF9 292 aaKnown RBP25.11■■□□□ 1.61
PPP4R4-202ENST00000328839 APPL1Q9UKG1 709 aa25.11■■□□□ 1.61
PPP4R4-202ENST00000328839 MYO6Q9UM54 1294 aa25.11■■□□□ 1.61
PPP4R4-202ENST00000328839 PRSS38A1L453 326 aa25.1■■□□□ 1.61
PPP4R4-202ENST00000328839 TNFRSF10CO14798 259 aa25.1■■□□□ 1.61
PPP4R4-202ENST00000328839 GM2AP17900 193 aa25.1■■□□□ 1.61
PPP4R4-202ENST00000328839 SLC10A7Q0GE19 358 aa25.1■■□□□ 1.61
PPP4R4-202ENST00000328839 TGIF1Q15583 401 aa25.1■■□□□ 1.61
PPP4R4-202ENST00000328839 OGFOD3Q6PK18 319 aa25.1■■□□□ 1.61
PPP4R4-202ENST00000328839 CYP4V2Q6ZWL3 525 aaPredicted RBP25.1■■□□□ 1.61
PPP4R4-202ENST00000328839 SPRED1Q7Z699 444 aa25.1■■□□□ 1.61
PPP4R4-202ENST00000328839 PELI3Q8N2H9 469 aa25.1■■□□□ 1.61
PPP4R4-202ENST00000328839 ZNF653Q96CK0 615 aa25.1■■□□□ 1.61
PPP4R4-202ENST00000328839 NSMCE3Q96MG7 304 aa25.1■■□□□ 1.61
PPP4R4-202ENST00000328839 PSKH2Q96QS6 385 aa25.1■■□□□ 1.61
PPP4R4-202ENST00000328839 HAUS4Q9H6D7 363 aa25.1■■□□□ 1.61
PPP4R4-202ENST00000328839 ZWILCHQ9H900 591 aa25.1■■□□□ 1.61
PPP4R4-202ENST00000328839 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP25.09■■□□□ 1.61
PPP4R4-202ENST00000328839 PDE2AO00408 941 aaPredicted RBP25.09■■□□□ 1.61
PPP4R4-202ENST00000328839 FTLP02792 175 aaPredicted RBP25.09■■□□□ 1.61
PPP4R4-202ENST00000328839 HOXC4P09017 264 aaPredicted RBP25.09■■□□□ 1.61
PPP4R4-202ENST00000328839 ITIH1P19827 911 aa25.09■■□□□ 1.61
PPP4R4-202ENST00000328839 TRIM23P36406 574 aa25.09■■□□□ 1.61
PPP4R4-202ENST00000328839 DPYSQ14117 519 aa25.09■■□□□ 1.61
PPP4R4-202ENST00000328839 TSR1Q2NL82 804 aaKnown RBP25.09■■□□□ 1.61
PPP4R4-202ENST00000328839 MAP9Q49MG5 647 aa25.09■■□□□ 1.61
PPP4R4-202ENST00000328839 PHF19Q5T6S3 580 aa25.09■■□□□ 1.61
PPP4R4-202ENST00000328839 PSTKQ8IV42 348 aaKnown RBP25.09■■□□□ 1.61
PPP4R4-202ENST00000328839 MED8Q96G25 268 aa25.09■■□□□ 1.61
PPP4R4-202ENST00000328839 CARS2Q9HA77 564 aaKnown RBP25.09■■□□□ 1.61
PPP4R4-202ENST00000328839 MYO1AQ9UBC5 1043 aa25.09■■□□□ 1.61
PPP4R4-202ENST00000328839 PCDHGC4Q9Y5F7 938 aa25.09■■□□□ 1.61
PPP4R4-202ENST00000328839 GOLGA6CA6NDK9 693 aa25.08■■□□□ 1.61
PPP4R4-202ENST00000328839 GOLGA6BA6NDN3 693 aa25.08■■□□□ 1.61
PPP4R4-202ENST00000328839 H3BRJ5 948 aa25.08■■□□□ 1.61
PPP4R4-202ENST00000328839 LRCH4O75427 683 aa25.08■■□□□ 1.61
PPP4R4-202ENST00000328839 CPP00450 1065 aa25.08■■□□□ 1.61
PPP4R4-202ENST00000328839 GOLGA6DP0CG33 693 aa25.08■■□□□ 1.61
PPP4R4-202ENST00000328839 MYCLP1P12525 358 aaPredicted RBP25.08■■□□□ 1.61
PPP4R4-202ENST00000328839 KRT10P13645 584 aa25.08■■□□□ 1.61
PPP4R4-202ENST00000328839 PNLIPP16233 465 aa25.08■■□□□ 1.61
PPP4R4-202ENST00000328839 HCAR3P49019 387 aa25.08■■□□□ 1.61
PPP4R4-202ENST00000328839 ZNF135P52742 658 aaPredicted RBP25.08■■□□□ 1.61
PPP4R4-202ENST00000328839 HLTFQ14527 1009 aaKnown RBP eCLIP25.08■■□□□ 1.61
PPP4R4-202ENST00000328839 ZNF571Q7Z3V5 609 aaPredicted RBP25.08■■□□□ 1.61
PPP4R4-202ENST00000328839 LZTR1Q8N653 840 aa25.08■■□□□ 1.61
PPP4R4-202ENST00000328839 KIAA1524Q8TCG1 905 aa25.08■■□□□ 1.61
PPP4R4-202ENST00000328839 FNIP1Q8TF40 1166 aa25.08■■□□□ 1.61
PPP4R4-202ENST00000328839 ZNF599Q96NL3 588 aa25.08■■□□□ 1.61
PPP4R4-202ENST00000328839 PHPT1Q9NRX4 125 aaPredicted RBP25.08■■□□□ 1.61
PPP4R4-202ENST00000328839 GOLGA6AQ9NYA3 693 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms