RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 OTUD3Q5T2D3 398 aaPredicted RBP16.07■□□□□ 0.16
SYNM-201ENST00000328642 ST13P4Q8IZP2 240 aaPredicted RBP16.07■□□□□ 0.16
SYNM-201ENST00000328642 SLAIN1Q8ND83 568 aa16.07■□□□□ 0.16
SYNM-201ENST00000328642 MRPS23Q9Y3D9 190 aaKnown RBP16.07■□□□□ 0.16
SYNM-201ENST00000328642 PHIPQ8WWQ0 1821 aa16.07■□□□□ 0.16
SYNM-201ENST00000328642 NPEPPSL1A6NEC2 478 aa16.07■□□□□ 0.16
SYNM-201ENST00000328642 FAM159BA6NKW6 160 aa16.07■□□□□ 0.16
SYNM-201ENST00000328642 SRRM3A6NNA2 597 aaPredicted RBP16.07■□□□□ 0.16
SYNM-201ENST00000328642 TCEA3O75764 348 aa16.07■□□□□ 0.16
SYNM-201ENST00000328642 PSMG1O95456 288 aa16.07■□□□□ 0.16
SYNM-201ENST00000328642 ZNF7P17097 686 aaPredicted RBP16.07■□□□□ 0.16
SYNM-201ENST00000328642 IL10P22301 178 aa16.07■□□□□ 0.16
SYNM-201ENST00000328642 EEF1DP29692 281 aaKnown RBP16.07■□□□□ 0.16
SYNM-201ENST00000328642 PGFP49763 221 aa16.07■□□□□ 0.16
SYNM-201ENST00000328642 TRIP4Q15650 581 aaPredicted RBP16.07■□□□□ 0.16
SYNM-201ENST00000328642 RD3Q7Z3Z2 195 aa16.07■□□□□ 0.16
SYNM-201ENST00000328642 VPS50Q96JG6 964 aa16.07■□□□□ 0.16
SYNM-201ENST00000328642 WDR41Q9HAD4 459 aa16.07■□□□□ 0.16
SYNM-201ENST00000328642 IRAK4Q9NWZ3 460 aa16.07■□□□□ 0.16
SYNM-201ENST00000328642 ARL15Q9NXU5 204 aa16.07■□□□□ 0.16
SYNM-201ENST00000328642 DTNAQ9Y4J8 743 aa16.07■□□□□ 0.16
SYNM-201ENST00000328642 WASF2Q9Y6W5 498 aa16.07■□□□□ 0.16
SYNM-201ENST00000328642 MYO1GB0I1T2 1018 aa16.07■□□□□ 0.16
SYNM-201ENST00000328642 CLASP2O75122 1294 aaKnown RBP16.07■□□□□ 0.16
SYNM-201ENST00000328642 PCDH8O95206 1070 aa16.07■□□□□ 0.16
SYNM-201ENST00000328642 CSF2RAP15509 400 aa16.07■□□□□ 0.16
SYNM-201ENST00000328642 TSNQ15631 228 aaKnown RBP16.07■□□□□ 0.16
SYNM-201ENST00000328642 TSTD2Q5T7W7 516 aa16.07■□□□□ 0.16
SYNM-201ENST00000328642 LRRC74BQ6ZQY2 392 aa16.07■□□□□ 0.16
SYNM-201ENST00000328642 RPAINQ86UA6 219 aa16.07■□□□□ 0.16
SYNM-201ENST00000328642 CPNE9Q8IYJ1 553 aa16.07■□□□□ 0.16
SYNM-201ENST00000328642 CCDC126Q96EE4 140 aa16.07■□□□□ 0.16
SYNM-201ENST00000328642 TRIM4Q9C037 500 aa16.07■□□□□ 0.16
SYNM-201ENST00000328642 RUBCNLQ9H714 662 aa16.07■□□□□ 0.16
SYNM-201ENST00000328642 SPASTQ9UBP0 616 aa16.07■□□□□ 0.16
SYNM-201ENST00000328642 ZNF189O75820 626 aaPredicted RBP16.06■□□□□ 0.16
SYNM-201ENST00000328642 AIF1P55008 147 aa16.06■□□□□ 0.16
SYNM-201ENST00000328642 ACOX1Q15067 660 aa16.06■□□□□ 0.16
SYNM-201ENST00000328642 PAFAH1B3Q15102 231 aaKnown RBP16.06■□□□□ 0.16
SYNM-201ENST00000328642 AP5B1Q2VPB7 878 aa16.06■□□□□ 0.16
SYNM-201ENST00000328642 ARCQ7LC44 396 aa16.06■□□□□ 0.16
SYNM-201ENST00000328642 CDH19Q9H159 772 aa16.06■□□□□ 0.16
SYNM-201ENST00000328642 RAP2CQ9Y3L5 183 aa16.06■□□□□ 0.16
SYNM-201ENST00000328642 KIAA1217Q5T5P2 1943 aa16.06■□□□□ 0.16
SYNM-201ENST00000328642 SBF2Q86WG5 1849 aa16.06■□□□□ 0.16
SYNM-201ENST00000328642 KANSL1LA0AUZ9 987 aa16.06■□□□□ 0.16
SYNM-201ENST00000328642 NIPSNAP2O75323 286 aa16.06■□□□□ 0.16
SYNM-201ENST00000328642 ZNF135P52742 658 aaPredicted RBP16.06■□□□□ 0.16
SYNM-201ENST00000328642 KLF10Q13118 480 aa16.06■□□□□ 0.16
SYNM-201ENST00000328642 CUZD1Q86UP6 607 aa16.06■□□□□ 0.16
SYNM-201ENST00000328642 ACAT2Q9BWD1 397 aa16.06■□□□□ 0.16
SYNM-201ENST00000328642 WDR6Q9NNW5 1121 aaKnown RBP16.06■□□□□ 0.16
SYNM-201ENST00000328642 SCN1AP35498 2009 aa16.06■□□□□ 0.16
SYNM-201ENST00000328642 TBC1D3BA6NDS4 549 aa16.06■□□□□ 0.16
SYNM-201ENST00000328642 SYN3O14994 580 aa16.06■□□□□ 0.16
SYNM-201ENST00000328642 DCLK1O15075 740 aa16.06■□□□□ 0.16
SYNM-201ENST00000328642 ADAM12O43184 909 aa16.06■□□□□ 0.16
SYNM-201ENST00000328642 FKBP9O95302 570 aa16.06■□□□□ 0.16
SYNM-201ENST00000328642 IGSF6O95976 241 aa16.06■□□□□ 0.16
SYNM-201ENST00000328642 PIK3R1P27986 724 aa16.06■□□□□ 0.16
SYNM-201ENST00000328642 SLC34A1Q06495 639 aa16.06■□□□□ 0.16
SYNM-201ENST00000328642 PABPC1LQ4VXU2 614 aaKnown RBP16.06■□□□□ 0.16
SYNM-201ENST00000328642 PIK3R6Q5UE93 754 aa16.06■□□□□ 0.16
SYNM-201ENST00000328642 LPCAT4Q643R3 524 aa16.06■□□□□ 0.16
SYNM-201ENST00000328642 C6orf89Q6UWU4 347 aa16.06■□□□□ 0.16
SYNM-201ENST00000328642 FKBP9P1Q75LS8 142 aa16.06■□□□□ 0.16
SYNM-201ENST00000328642 TRMT11Q7Z4G4 463 aaKnown RBP16.06■□□□□ 0.16
SYNM-201ENST00000328642 AMIGO2Q86SJ2 522 aa16.06■□□□□ 0.16
SYNM-201ENST00000328642 CMTM8Q8IZV2 173 aa16.06■□□□□ 0.16
SYNM-201ENST00000328642 CLEC4FQ8N1N0 589 aa16.06■□□□□ 0.16
SYNM-201ENST00000328642 PHTF2Q8N3S3 785 aa16.06■□□□□ 0.16
SYNM-201ENST00000328642 TSC22D3Q99576 134 aa16.06■□□□□ 0.16
SYNM-201ENST00000328642 MRPL57Q9BQC6 102 aaKnown RBP16.06■□□□□ 0.16
SYNM-201ENST00000328642 ZNF180Q9UJW8 692 aa16.06■□□□□ 0.16
SYNM-201ENST00000328642 TCRBV5S1A1TA0A578 114 aa16.05■□□□□ 0.16
SYNM-201ENST00000328642 CPSF4O95639 269 aaKnown RBP16.05■□□□□ 0.16
SYNM-201ENST00000328642 C8AP07357 584 aa16.05■□□□□ 0.16
SYNM-201ENST00000328642 ABCB1P08183 1280 aaPredicted RBP16.05■□□□□ 0.16
SYNM-201ENST00000328642 CLCN5P51795 746 aa16.05■□□□□ 0.16
SYNM-201ENST00000328642 GALNT2Q10471 571 aa16.05■□□□□ 0.16
SYNM-201ENST00000328642 GTF2H3Q13889 308 aa16.05■□□□□ 0.16
SYNM-201ENST00000328642 TTLL9Q3SXZ7 439 aa16.05■□□□□ 0.16
SYNM-201ENST00000328642 AARS2Q5JTZ9 985 aaKnown RBP16.05■□□□□ 0.16
SYNM-201ENST00000328642 SIRPB2Q5JXA9 342 aa16.05■□□□□ 0.16
SYNM-201ENST00000328642 BHLHE22Q8NFJ8 381 aaPredicted RBP16.05■□□□□ 0.16
SYNM-201ENST00000328642 HAPLN3Q96S86 360 aa16.05■□□□□ 0.16
SYNM-201ENST00000328642 WARS2Q9UGM6 360 aaKnown RBP16.05■□□□□ 0.16
SYNM-201ENST00000328642 GGA2Q9UJY4 613 aa16.05■□□□□ 0.16
SYNM-201ENST00000328642 TLR6Q9Y2C9 796 aa16.05■□□□□ 0.16
SYNM-201ENST00000328642 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.05■□□□□ 0.16
SYNM-201ENST00000328642 C2orf78A6NCI8 922 aa16.05■□□□□ 0.16
SYNM-201ENST00000328642 STX16-NPEPL1H3BU86 382 aa16.05■□□□□ 0.16
SYNM-201ENST00000328642 SEC22BO75396 215 aa16.05■□□□□ 0.16
SYNM-201ENST00000328642 CLDN11O75508 207 aa16.05■□□□□ 0.16
SYNM-201ENST00000328642 NDST3O95803 873 aa16.05■□□□□ 0.16
SYNM-201ENST00000328642 SERPINA4P29622 427 aa16.05■□□□□ 0.16
SYNM-201ENST00000328642 LSM12Q3MHD2 195 aaKnown RBP16.05■□□□□ 0.16
SYNM-201ENST00000328642 TMC5Q6UXY8 1006 aa16.05■□□□□ 0.16
SYNM-201ENST00000328642 SCD5Q86SK9 330 aa16.05■□□□□ 0.16
SYNM-201ENST00000328642 STAG3L4Q8TBR4 150 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms