RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 ZNF773Q6PK81 442 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 SLC9A9Q8IVB4 645 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 SYNE4Q8N205 404 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 GPRASP2Q96D09 838 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 MXRA8Q9BRK3 442 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 CHCHD6Q9BRQ6 235 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 SALL4Q9UJQ4 1053 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 CSADQ9Y600 493 aa7.08□□□□□ -1.28
SMC1A-201ENST00000322213 FSCN2O14926 492 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 TRUB2O95900 331 aaKnown RBP7.07□□□□□ -1.28
SMC1A-201ENST00000322213 TCF3P15923 654 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 LTKP29376 864 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 NAGLUP54802 743 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 FAM92BQ6ZTR7 304 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 ZNF670Q9BS34 389 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 GPN1Q9HCN4 374 aaPredicted RBP7.07□□□□□ -1.28
SMC1A-201ENST00000322213 STRCQ7RTU9 1775 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 NRXN3Q9Y4C0 1643 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 ALPK3Q96L96 1907 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 C10orf71Q711Q0 1435 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 MDM4O15151 490 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 PAPSS1O43252 624 aaPredicted RBP7.07□□□□□ -1.28
SMC1A-201ENST00000322213 SYNCRIPO60506 623 aaKnown RBP7.07□□□□□ -1.28
SMC1A-201ENST00000322213 GABBR2O75899 941 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 ENTPD1P49961 510 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 TWF1Q12792 350 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 CA9Q16790 459 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 PARP8Q8N3A8 854 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 RAB42Q8N4Z0 105 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 HEPHQ9BQS7 1158 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 GSDMCQ9BYG8 508 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 GDAP2Q9NXN4 497 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 EGFL7Q9UHF1 273 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 TNRC6CQ9HCJ0 1690 aaKnown RBP7.07□□□□□ -1.28
SMC1A-201ENST00000322213 MERTKQ12866 999 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 IQSEC1Q6DN90 963 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 IL27RAQ6UWB1 636 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 ANKRD13BQ86YJ7 626 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 LPCAT1Q8NF37 534 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 PJA1Q8NG27 643 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 TMEM143Q96AN5 459 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 DIRAS2Q96HU8 199 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 SFMBT1Q9UHJ3 866 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 CNTNAP2Q9UHC6 1331 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 NOTCH3Q9UM47 2321 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 A0A0J9YYE9 177 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 MGAT4DA6NG13 374 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 K7EPI3 171 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 ATP5F1P24539 256 aaPredicted RBP7.07□□□□□ -1.28
SMC1A-201ENST00000322213 PPP2R2DQ66LE6 453 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 PHF10Q8WUB8 498 aaKnown RBP7.07□□□□□ -1.28
SMC1A-201ENST00000322213 DOCK7Q96N67 2140 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 SLC30A2Q9BRI3 323 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 RANBP3Q9H6Z4 567 aaPredicted RBP7.07□□□□□ -1.28
SMC1A-201ENST00000322213 FARSBQ9NSD9 589 aaKnown RBP7.07□□□□□ -1.28
SMC1A-201ENST00000322213 PLXNA3P51805 1871 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 USP54Q70EL1 1684 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 PI4KAP42356 2102 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 GNG14A0A1W2PPG7 69 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 FUOMA2VDF0 154 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 MYCP01106 439 aaPredicted RBP7.07□□□□□ -1.28
SMC1A-201ENST00000322213 CHRNGP07510 517 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 ZSCAN5DPP0CG00 497 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 CDK4P11802 303 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 TFEBP19484 476 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 MAPK12P53778 367 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 KLF10Q13118 480 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 KCTD2Q14681 263 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 TKFCQ3LXA3 575 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 SYTL3Q4VX76 610 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 BTBD8Q5XKL5 378 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 ZYG11AQ6WRX3 759 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 FBXO30Q8TB52 745 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 ZNF606Q8WXB4 792 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 NECTIN3Q9NQS3 549 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 PLXND1Q9Y4D7 1925 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 I3L521 148 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 CYP27B1O15528 508 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 PIAS1O75925 651 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 PGRP06401 933 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 LTA4HP09960 611 aaKnown RBP7.07□□□□□ -1.28
SMC1A-201ENST00000322213 TRIM23P36406 574 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 GNL1P36915 607 aaPredicted RBP7.07□□□□□ -1.28
SMC1A-201ENST00000322213 RHAGQ02094 409 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 PRKG2Q13237 762 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 RNASEH2BQ5TBB1 312 aaKnown RBP7.07□□□□□ -1.28
SMC1A-201ENST00000322213 KCNT2Q6UVM3 1135 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 VSTM1Q6UX27 236 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 CCDC24Q8N4L8 307 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 TRUB1Q8WWH5 349 aaKnown RBP7.07□□□□□ -1.28
SMC1A-201ENST00000322213 MTMR9Q96QG7 549 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 DDX43Q9NXZ2 648 aaKnown RBP7.07□□□□□ -1.28
SMC1A-201ENST00000322213 FOXO6A8MYZ6 492 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 BCAS2O75934 225 aaPredicted RBP7.07□□□□□ -1.28
SMC1A-201ENST00000322213 DLDP09622 509 aaKnown RBP7.07□□□□□ -1.28
SMC1A-201ENST00000322213 FDX1P10109 184 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 PWP1Q13610 501 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 MTMR2Q13614 643 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 KRT33BQ14525 404 aa7.07□□□□□ -1.28
SMC1A-201ENST00000322213 AHSA2Q719I0 299 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms