RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 ZC4H2Q9NQZ6 224 aa15.31■□□□□ 0.04
VARS2-201ENST00000321897 TRMT13Q9NUP7 481 aaKnown RBP15.31■□□□□ 0.04
VARS2-201ENST00000321897 ZNHIT2Q9UHR6 403 aa15.31■□□□□ 0.04
VARS2-201ENST00000321897 N4BP2Q86UW6 1770 aaPredicted RBP15.31■□□□□ 0.04
VARS2-201ENST00000321897 PRR23AA6NEV1 266 aa15.31■□□□□ 0.04
VARS2-201ENST00000321897 CCNT2O60583 730 aaKnown RBP15.31■□□□□ 0.04
VARS2-201ENST00000321897 ALDH2P05091 517 aa15.31■□□□□ 0.04
VARS2-201ENST00000321897 HSMCR30P0CW71 290 aa15.31■□□□□ 0.04
VARS2-201ENST00000321897 SLC2A3P11169 496 aa15.31■□□□□ 0.04
VARS2-201ENST00000321897 UGT1A6P19224 532 aa15.31■□□□□ 0.04
VARS2-201ENST00000321897 UGT1A1P22309 533 aa15.31■□□□□ 0.04
VARS2-201ENST00000321897 UGT1A4P22310 534 aa15.31■□□□□ 0.04
VARS2-201ENST00000321897 UGT1A3P35503 534 aa15.31■□□□□ 0.04
VARS2-201ENST00000321897 UGT1A5P35504 534 aa15.31■□□□□ 0.04
VARS2-201ENST00000321897 RAB10P61026 200 aa15.31■□□□□ 0.04
VARS2-201ENST00000321897 LSM12Q3MHD2 195 aaKnown RBP15.31■□□□□ 0.04
VARS2-201ENST00000321897 CNSTQ6PJW8 725 aa15.31■□□□□ 0.04
VARS2-201ENST00000321897 CDYL2Q8N8U2 506 aa15.31■□□□□ 0.04
VARS2-201ENST00000321897 ZBTB8BQ8NAP8 495 aaPredicted RBP15.31■□□□□ 0.04
VARS2-201ENST00000321897 TMIGD2Q96BF3 282 aa15.31■□□□□ 0.04
VARS2-201ENST00000321897 GIMAP2Q9UG22 337 aa15.31■□□□□ 0.04
VARS2-201ENST00000321897 C2orf81A6NN90 581 aa15.31■□□□□ 0.04
VARS2-201ENST00000321897 DAOAP59103 153 aa15.31■□□□□ 0.04
VARS2-201ENST00000321897 RHOAP61586 193 aa15.31■□□□□ 0.04
VARS2-201ENST00000321897 TIGD7Q6NT04 549 aaPredicted RBP15.31■□□□□ 0.04
VARS2-201ENST00000321897 GLT6D1Q7Z4J2 308 aa15.31■□□□□ 0.04
VARS2-201ENST00000321897 FAM162AQ96A26 154 aa15.31■□□□□ 0.04
VARS2-201ENST00000321897 RTKNQ9BST9 563 aa15.31■□□□□ 0.04
VARS2-201ENST00000321897 STK39Q9UEW8 545 aa15.31■□□□□ 0.04
VARS2-201ENST00000321897 FARP1Q9Y4F1 1045 aaPredicted RBP15.31■□□□□ 0.04
VARS2-201ENST00000321897 FADS3Q9Y5Q0 445 aa15.31■□□□□ 0.04
VARS2-201ENST00000321897 TRAFD1O14545 582 aaPredicted RBP15.3■□□□□ 0.04
VARS2-201ENST00000321897 SNAI1O95863 264 aaPredicted RBP15.3■□□□□ 0.04
VARS2-201ENST00000321897 MYL4P12829 197 aa15.3■□□□□ 0.04
VARS2-201ENST00000321897 KPNA1P52294 538 aaPredicted RBP15.3■□□□□ 0.04
VARS2-201ENST00000321897 GK3PQ14409 553 aa15.3■□□□□ 0.04
VARS2-201ENST00000321897 PTPRNQ16849 979 aa15.3■□□□□ 0.04
VARS2-201ENST00000321897 SAMD4BQ5PRF9 694 aaKnown RBP15.3■□□□□ 0.04
VARS2-201ENST00000321897 TMEM26Q6ZUK4 368 aa15.3■□□□□ 0.04
VARS2-201ENST00000321897 USP50Q70EL3 339 aaPredicted RBP15.3■□□□□ 0.04
VARS2-201ENST00000321897 TMEM110Q86TL2 294 aa15.3■□□□□ 0.04
VARS2-201ENST00000321897 SPPL2CQ8IUH8 684 aa15.3■□□□□ 0.04
VARS2-201ENST00000321897 SLC44A2Q8IWA5 706 aaPredicted RBP15.3■□□□□ 0.04
VARS2-201ENST00000321897 RAD21L1Q9H4I0 556 aa15.3■□□□□ 0.04
VARS2-201ENST00000321897 RAB26Q9ULW5 256 aa15.3■□□□□ 0.04
VARS2-201ENST00000321897 PCDHB5Q9Y5E4 795 aa15.3■□□□□ 0.04
VARS2-201ENST00000321897 HDCP19113 662 aa15.3■□□□□ 0.04
VARS2-201ENST00000321897 PBLDP30039 288 aaPredicted RBP15.3■□□□□ 0.04
VARS2-201ENST00000321897 SLC11A2P49281 568 aa15.3■□□□□ 0.04
VARS2-201ENST00000321897 CHRNB3Q05901 458 aa15.3■□□□□ 0.04
VARS2-201ENST00000321897 TAF10Q12962 218 aa15.3■□□□□ 0.04
VARS2-201ENST00000321897 DPYSL2Q16555 572 aa15.3■□□□□ 0.04
VARS2-201ENST00000321897 PGS1Q32NB8 556 aa15.3■□□□□ 0.04
VARS2-201ENST00000321897 PAGE2BQ5JRK9 111 aa15.3■□□□□ 0.04
VARS2-201ENST00000321897 POTEHQ6S545 545 aa15.3■□□□□ 0.04
VARS2-201ENST00000321897 RP9Q8TA86 221 aaKnown RBP15.3■□□□□ 0.04
VARS2-201ENST00000321897 GTF3C2Q8WUA4 911 aaPredicted RBP15.3■□□□□ 0.04
VARS2-201ENST00000321897 TMEM209Q96SK2 561 aa15.3■□□□□ 0.04
VARS2-201ENST00000321897 ZFP14Q9HCL3 533 aa15.3■□□□□ 0.04
VARS2-201ENST00000321897 SCUBE2Q9NQ36 999 aa15.3■□□□□ 0.04
VARS2-201ENST00000321897 GMIPQ9P107 970 aa15.3■□□□□ 0.04
VARS2-201ENST00000321897 TNRC6CQ9HCJ0 1690 aaKnown RBP15.3■□□□□ 0.04
VARS2-201ENST00000321897 A0A088AWK7 358 aa15.3■□□□□ 0.04
VARS2-201ENST00000321897 BIRC5O15392 142 aa15.3■□□□□ 0.04
VARS2-201ENST00000321897 GCATO75600 419 aa15.3■□□□□ 0.04
VARS2-201ENST00000321897 CES1P23141 567 aa15.3■□□□□ 0.04
VARS2-201ENST00000321897 GPR15P49685 360 aa15.3■□□□□ 0.04
VARS2-201ENST00000321897 TPTEP56180 551 aa15.3■□□□□ 0.04
VARS2-201ENST00000321897 LRRC74AQ0VAA2 488 aa15.3■□□□□ 0.04
VARS2-201ENST00000321897 NFE2Q16621 373 aaPredicted RBP15.3■□□□□ 0.04
VARS2-201ENST00000321897 FOXB2Q5VYV0 432 aa15.3■□□□□ 0.04
VARS2-201ENST00000321897 METTL6Q8TCB7 284 aa15.3■□□□□ 0.04
VARS2-201ENST00000321897 FIG4Q92562 907 aa15.3■□□□□ 0.04
VARS2-201ENST00000321897 TRIM8Q9BZR9 551 aa15.3■□□□□ 0.04
VARS2-201ENST00000321897 GLOD4Q9HC38 313 aa15.3■□□□□ 0.04
VARS2-201ENST00000321897 FZD10Q9ULW2 581 aa15.3■□□□□ 0.04
VARS2-201ENST00000321897 KANSL1LA0AUZ9 987 aa15.29■□□□□ 0.04
VARS2-201ENST00000321897 MAGEB16A2A368 324 aa15.29■□□□□ 0.04
VARS2-201ENST00000321897 SERPIND1P05546 499 aa15.29■□□□□ 0.04
VARS2-201ENST00000321897 RBP1P09455 135 aa15.29■□□□□ 0.04
VARS2-201ENST00000321897 RAD51Q06609 339 aa15.29■□□□□ 0.04
VARS2-201ENST00000321897 PLD1Q13393 1074 aa15.29■□□□□ 0.04
VARS2-201ENST00000321897 TRNP1Q6NT89 227 aa15.29■□□□□ 0.04
VARS2-201ENST00000321897 POC5Q8NA72 575 aa15.29■□□□□ 0.04
VARS2-201ENST00000321897 GANCQ8TET4 914 aa15.29■□□□□ 0.04
VARS2-201ENST00000321897 PSMG2Q969U7 264 aa15.29■□□□□ 0.04
VARS2-201ENST00000321897 SERPINB11Q96P15 392 aa15.29■□□□□ 0.04
VARS2-201ENST00000321897 KCTD14Q9BQ13 255 aaPredicted RBP15.29■□□□□ 0.04
VARS2-201ENST00000321897 ABCC13Q9NSE7 274 aa15.29■□□□□ 0.04
VARS2-201ENST00000321897 CDH9Q9ULB4 789 aa15.29■□□□□ 0.04
VARS2-201ENST00000321897 PCDHGC4Q9Y5F7 938 aa15.29■□□□□ 0.04
VARS2-201ENST00000321897 ASNA1O43681 348 aa15.29■□□□□ 0.04
VARS2-201ENST00000321897 SYNCRIPO60506 623 aaKnown RBP15.29■□□□□ 0.04
VARS2-201ENST00000321897 TSC22D2O75157 780 aa15.29■□□□□ 0.04
VARS2-201ENST00000321897 H6PDO95479 791 aa15.29■□□□□ 0.04
VARS2-201ENST00000321897 AP2A1O95782 977 aa15.29■□□□□ 0.04
VARS2-201ENST00000321897 PTPN9P43378 593 aa15.29■□□□□ 0.04
VARS2-201ENST00000321897 MAP3K10Q02779 954 aa15.29■□□□□ 0.04
VARS2-201ENST00000321897 GPRIN1Q7Z2K8 1008 aa15.29■□□□□ 0.04
VARS2-201ENST00000321897 OR8H2Q8N162 312 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms