RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 CPSF7Q8N684 471 aaKnown RBP12.77□□□□□ -0.37
DNMT3A-202ENST00000321117 WWOXQ9NZC7 414 aa12.77□□□□□ -0.37
DNMT3A-202ENST00000321117 CDH9Q9ULB4 789 aa12.77□□□□□ -0.37
DNMT3A-202ENST00000321117 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.77□□□□□ -0.37
DNMT3A-202ENST00000321117 G3V2L1 256 aa12.77□□□□□ -0.37
DNMT3A-202ENST00000321117 SDHDO14521 159 aa12.77□□□□□ -0.37
DNMT3A-202ENST00000321117 EI24O14681 340 aa12.77□□□□□ -0.37
DNMT3A-202ENST00000321117 KATNA1O75449 491 aa12.77□□□□□ -0.37
DNMT3A-202ENST00000321117 STAU1O95793 577 aaKnown RBP12.77□□□□□ -0.37
DNMT3A-202ENST00000321117 PROZP22891 400 aa12.77□□□□□ -0.37
DNMT3A-202ENST00000321117 JAK1P23458 1154 aa12.77□□□□□ -0.37
DNMT3A-202ENST00000321117 CCT8P50990 548 aa12.77□□□□□ -0.37
DNMT3A-202ENST00000321117 RABGGTBP53611 331 aa12.77□□□□□ -0.37
DNMT3A-202ENST00000321117 ZNF280AP59817 542 aaPredicted RBP12.77□□□□□ -0.37
DNMT3A-202ENST00000321117 KIAA0930Q6ICG6 404 aaPredicted RBP12.77□□□□□ -0.37
DNMT3A-202ENST00000321117 TRNP1Q6NT89 227 aa12.77□□□□□ -0.37
DNMT3A-202ENST00000321117 SPESP1Q6UW49 350 aa12.77□□□□□ -0.37
DNMT3A-202ENST00000321117 KCTD8Q6ZWB6 473 aa12.77□□□□□ -0.37
DNMT3A-202ENST00000321117 PPTC7Q8NI37 304 aa12.77□□□□□ -0.37
DNMT3A-202ENST00000321117 TRPM4Q8TD43 1214 aa12.77□□□□□ -0.37
DNMT3A-202ENST00000321117 SNX19Q92543 992 aa12.77□□□□□ -0.37
DNMT3A-202ENST00000321117 ZNF778Q96MU6 729 aa12.77□□□□□ -0.37
DNMT3A-202ENST00000321117 ACOX2Q99424 681 aa12.77□□□□□ -0.37
DNMT3A-202ENST00000321117 NFKBIZQ9BYH8 718 aa12.77□□□□□ -0.37
DNMT3A-202ENST00000321117 TRIM54Q9BYV2 358 aa12.77□□□□□ -0.37
DNMT3A-202ENST00000321117 MPP6Q9NZW5 540 aa12.77□□□□□ -0.37
DNMT3A-202ENST00000321117 A8MT66 165 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 GLDCP23378 1020 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 YWHAQP27348 245 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 ENTPD1P49961 510 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 TBX4P57082 545 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 LIPEQ05469 1076 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 PCBP1Q15365 356 aaKnown RBP eCLIP12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 LRRC49Q8IUZ0 686 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 LEMD2Q8NC56 503 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 NPY6RQ99463 290 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 TBCDQ9BTW9 1192 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 GPR63Q9BZJ6 419 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 DPY30Q9C005 99 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 EPB41L1Q9H4G0 881 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 ALG2Q9H553 416 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 OAZ3Q9UMX2 235 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 ARFGEF1Q9Y6D6 1849 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 CCL22O00626 93 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 PAGE1O75459 146 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 SLC22A3O75751 556 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 DLGAP3O95886 979 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 TFAP2AP05549 437 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 CAPGP40121 348 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 CLCN2P51788 898 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 PITX1P78337 314 aaPredicted RBP12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 EGFLAMQ63HQ2 1017 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 IL27RAQ6UWB1 636 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 HFE2Q6ZVN8 426 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 PACRGLQ8N7B6 248 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 OR7A2PQ8NGA2 310 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 ARNTL2Q8WYA1 636 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 ABHD16BQ9H3Z7 469 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 UXTQ9UBK9 157 aaPredicted RBP12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 AHDC1Q5TGY3 1603 aaPredicted RBP12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 KIF13BQ9NQT8 1826 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 NRCAMQ92823 1304 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 PARNO95453 639 aaKnown RBP12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 ZNF682O95780 498 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 PIRTP0C851 137 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 DARSP14868 501 aaKnown RBP12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 HDCP19113 662 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 MSH3P20585 1137 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 CHRNA4P43681 627 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 MRPS15P82914 257 aaKnown RBP12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 DAB2P98082 770 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 PRKCQQ04759 706 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 ZNF534Q76KX8 674 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 GPSM1Q86YR5 675 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 CDYL2Q8N8U2 506 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 TXNDC5Q8NBS9 432 aaKnown RBP12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 MYLPFQ96A32 169 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 C12orf43Q96C57 262 aaKnown RBP12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 GMEB1Q9Y692 573 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 TSPAN3O60637 253 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 DGUOKQ16854 277 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 GALNT18Q6P9A2 607 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 ERMP1Q7Z2K6 904 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 ZNF513Q8N8E2 541 aaPredicted RBP12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 DQX1Q8TE96 717 aaKnown RBP12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 KLHL5Q96PQ7 755 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 EPS8L2Q9H6S3 715 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 CD320Q9NPF0 282 aa12.76□□□□□ -0.37
DNMT3A-202ENST00000321117 ADM5C9JUS6 153 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 PIP5K1BO14986 540 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 POMCP01189 267 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 AARS2Q5JTZ9 985 aaKnown RBP12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 CHSY3Q70JA7 882 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 RPS27LQ71UM5 84 aaKnown RBP12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 POLR1EQ9GZS1 481 aaKnown RBP12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 TRNAU1APQ9NX07 287 aaKnown RBP12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 SFMBT1Q9UHJ3 866 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 COQ6Q9Y2Z9 468 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 TIMM22Q9Y584 194 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 NRAPQ86VF7 1730 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms