RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 SUCOQ9UBS9 1254 aaKnown RBP16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 GNEQ9Y223 722 aaKnown RBP16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 RPTORQ8N122 1335 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 CCL15-CCL14A0A0B4J2E2 113 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 CSF1RP07333 972 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 POLR2EP19388 210 aaKnown RBP16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 ZNF143P52747 638 aaPredicted RBP16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 CCL15Q16663 113 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 RFKQ969G6 155 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 ADGRE2Q9UHX3 823 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 OPLAHO14841 1288 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 LINC00032P0C843 101 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 ELP6Q0PNE2 266 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 SLC9A4Q6AI14 798 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 APTXQ7Z2E3 356 aaKnown RBP16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 FCRL4Q96PJ5 515 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 AIFM2Q9BRQ8 373 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 ACSS3Q9H6R3 686 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 CHST7Q9NS84 486 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 OR12D3Q9UGF7 316 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 NKRFO15226 690 aaKnown RBP eCLIP16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 C10orf107Q8IVU9 208 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 OR10H1Q9Y4A9 318 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 GTF2A2P52657 109 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 PRKAG1P54619 331 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 FRMD7Q6ZUT3 714 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 ZNF34Q8IZ26 560 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 LGI2Q8N0V4 545 aa16.91■□□□□ 0.3
SMCHD1-201ENST00000320876 IGFBP5P24593 272 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 DLG1Q12959 904 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 LRRC20Q8TCA0 184 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 NEK7Q8TDX7 302 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 C1GALT1C1Q96EU7 318 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 ZC3H10Q96K80 434 aaKnown RBP16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 EXD2Q9NVH0 621 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 PLIN3O60664 434 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 FTH1P02794 183 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 E2F2Q14209 437 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 CNSTQ6PJW8 725 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 PNPT1Q8TCS8 783 aaKnown RBP16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 SLC30A4O14863 429 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 S100A2P29034 98 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 CEBPGP53567 150 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 C3orf67Q6ZVT6 689 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 C2orf49Q9BVC5 232 aaPredicted RBP16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 RSPH9Q9H1X1 276 aaPredicted RBP16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 SMPD3Q9NY59 655 aaPredicted RBP16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 PLCL2Q9UPR0 1127 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 FADS3Q9Y5Q0 445 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 PEX16Q9Y5Y5 336 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 OAS3Q9Y6K5 1087 aaKnown RBP16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 SEPHS1P49903 392 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 TUBA3CQ13748 450 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 ZNF615Q8N8J6 731 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 CDADC1Q9BWV3 514 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 MED11Q9P086 117 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 AP2A2O94973 939 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 TRUB2O95900 331 aaKnown RBP16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 TMEM119Q4V9L6 283 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 PAN2Q504Q3 1202 aaKnown RBP16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 TUBA3EQ6PEY2 450 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 GIN1Q9NXP7 522 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 CDH22Q9UJ99 828 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 PCDHGB3Q9Y5G1 929 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 AXLP30530 894 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 EGFLAMQ63HQ2 1017 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 ACOT12Q8WYK0 555 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 ATXN3LQ9H3M9 355 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 H3BNH8 94 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 PEX11AO75192 247 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 RSL1D1O76021 490 aaKnown RBP16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 CYP2B6P20813 491 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 ITGA7Q13683 1181 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 C6orf52Q5T4I8 152 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 UNC5AQ6ZN44 842 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 METTL3Q86U44 580 aaKnown RBP16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 ZNF410Q86VK4 478 aa16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 FBXO16Q8IX29 292 aaPredicted RBP16.9■□□□□ 0.3
SMCHD1-201ENST00000320876 SALL1Q9NSC2 1324 aa16.89■□□□□ 0.3
SMCHD1-201ENST00000320876 SLC28A2O43868 658 aa16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 ARP10275 920 aa16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 TFEBP19484 476 aa16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 SLC7A2P52569 658 aa16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 THAP5Q7Z6K1 395 aa16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 ZNF670Q9BS34 389 aa16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 RBMX2Q9Y388 322 aaKnown RBP16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 BAZ2AQ9UIF9 1905 aaKnown RBP16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 GTPBP1O00178 669 aaKnown RBP16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 PRMT5O14744 637 aaPredicted RBP16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 RAB15P59190 212 aa16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 ATP6V0D1P61421 351 aa16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 CCSAPQ6IQ19 270 aaPredicted RBP16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 SPATA19Q7Z5L4 167 aa16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 TMEM86AQ8N2M4 240 aa16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 PPRC1Q5VV67 1664 aaKnown RBP16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 TRAFD1O14545 582 aaPredicted RBP16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 PPP4CP60510 307 aa16.89■□□□□ 0.29
SMCHD1-201ENST00000320876 GPR180Q86V85 440 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms