RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 TBC1D17Q9HA65 648 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 CASS4Q9NQ75 786 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 DYRK4Q9NR20 520 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 DLGAP2Q9P1A6 1054 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 SUSD2Q9UGT4 822 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 PPM1HQ9ULR3 514 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 STON1Q9Y6Q2 735 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 PLXNB3Q9ULL4 1909 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 HEATR9A2RTY3 570 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 UPK3BL1B0FP48 263 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 UPK3BL2E5RIL1 263 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 RNF103O00237 685 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 TRAFD1O14545 582 aaPredicted RBP3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 PLRG1O43660 514 aaKnown RBP3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 SRGAP2O75044 1071 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 CNTN5O94779 1100 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 PGLSO95336 258 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 GJB6O95452 261 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 TDGF1P13385 188 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 GJA1P17302 382 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 MZF1P28698 734 aaPredicted RBP3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 VIPR1P32241 457 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 CD70P32970 193 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 CLCNKAP51800 687 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 ADARP55265 1226 aaKnown RBP3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 NAA20P61599 178 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 YPEL5P62699 121 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 WASHC5Q12768 1159 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 CALCOCO2Q13137 446 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 TAF1AQ15573 450 aaPredicted RBP3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 CLPPQ16740 277 aaPredicted RBP3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 GPR33Q49SQ1 333 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 FNDC3BQ53EP0 1204 aaKnown RBP3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 C2CD6Q53TS8 623 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 AARS2Q5JTZ9 985 aaKnown RBP3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 ARMC12Q5T9G4 340 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 EMC10Q5UCC4 262 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 STEAP4Q687X5 459 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 DUPD1Q68J44 220 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 TXNRD3NBQ6F5E7 133 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 C16orf46Q6P387 395 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 GDPD4Q6W3E5 623 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 KIAA0408Q6ZU52 694 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 LONP2Q86WA8 852 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 MREGQ8N565 214 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 ZCCHC9Q8N567 271 aaKnown RBP3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 ZNF513Q8N8E2 541 aaPredicted RBP3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 GPR150Q8NGU9 434 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 SKA1Q96BD8 255 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 CCDC97Q96F63 343 aaPredicted RBP3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 ZC3H10Q96K80 434 aaKnown RBP3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 TRIB3Q96RU7 358 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 TTC1Q99614 292 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 ZDHHC5Q9C0B5 715 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 EBF3Q9H4W6 596 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 ITM2CQ9NQX7 267 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 GDF3Q9NR23 364 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 ETNK2Q9NVF9 386 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 TRMT1Q9NXH9 659 aaKnown RBP3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 KLHL8Q9P2G9 620 aaPredicted RBP3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 RSPH14Q9UHP6 348 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 INTS6Q9UL03 887 aaKnown RBP3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 ZNF148Q9UQR1 794 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 HS3ST3A1Q9Y663 406 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 EML5Q05BV3 1969 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 PRRC2BQ5JSZ5 2229 aaKnown RBP3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 GOLGA6L7A0A1B0GV03 622 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 FAM237BA0A1B0GVD1 139 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 TBC1D3BA6NDS4 549 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 LRRC72A6NJI9 287 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 SHISA7A6NL88 538 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 PDE2AO00408 941 aaPredicted RBP3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 DLL1O00548 723 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 RHOBTB1O94844 696 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 CD160O95971 181 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 KRT14P02533 472 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 CNTFP26441 200 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 ATP5DP30049 168 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 MARCKSL1P49006 195 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 ATXN1P54253 815 aaKnown RBP3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 KIAA1024LP59773 190 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 GPLD1P80108 840 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 PLOD1Q02809 727 aaPredicted RBP3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 GBE1Q04446 702 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 GRM2Q14416 872 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 ITIH4Q14624 930 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 BRD3Q15059 726 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 KCNT1Q5JUK3 1230 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 SPANXN3Q5MJ09 141 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 C9orf64Q5T6V5 341 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 LRRC8EQ6NSJ5 796 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 HIBCHQ6NVY1 386 aaPredicted RBP3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 EMBQ6PCB8 327 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 RFWD3Q6PCD5 774 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 CERS6Q6ZMG9 384 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 TRMT10CQ7L0Y3 403 aaKnown RBP3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 SLC26A11Q86WA9 606 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 PYROXD2Q8N2H3 581 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 STK40Q8N2I9 435 aa3.31□□□□□ -1.88
SCAMP1-201ENST00000320280 OR2T34Q8NGX1 318 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms