RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 ZBBXA8MT70 800 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 F5H5T6 163 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 PRRG1O14668 218 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 GJB3O75712 270 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 ATP5BP06576 529 aaKnown RBP13.12□□□□□ -0.31
CPNE1-201ENST00000317677 CTSAP10619 480 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 ZNF12P17014 697 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 NAT1P18440 290 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 CDH2P19022 906 aaPredicted RBP13.12□□□□□ -0.31
CPNE1-201ENST00000317677 NMBRP28336 390 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 PCSK6P29122 969 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 CORO1AP31146 461 aaKnown RBP13.12□□□□□ -0.31
CPNE1-201ENST00000317677 ETV4P43268 484 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 CHRNA4P43681 627 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 NPY2RP49146 381 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 RPS24P62847 133 aaKnown RBP13.12□□□□□ -0.31
CPNE1-201ENST00000317677 FOLH1Q04609 750 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 ZBTB16Q05516 673 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 SERINC3Q13530 473 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 PRPSAP1Q14558 356 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 TBCCQ15814 346 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 NAPEPLDQ6IQ20 393 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 SLC2A7Q6PXP3 512 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 NANOGNBQ7Z5D8 188 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 MTBPQ96DY7 904 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 APOPT1Q96IL0 206 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 Q9H521 79 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 PDFQ9HBH1 243 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 NT5MQ9NPB1 228 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 UBAP1Q9NZ09 502 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 SOX13Q9UN79 622 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 CEPT1Q9Y6K0 416 aa13.12□□□□□ -0.31
CPNE1-201ENST00000317677 DOCK6Q96HP0 2047 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 A0A0D9SEW6 157 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 FAM237BA0A1B0GVD1 139 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 LCHNA4D1U4 455 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 MUSKO15146 869 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 RAMP2O60895 175 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 PMPCBO75439 489 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 KRT38O76015 456 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 USP1O94782 785 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 POLBP06746 335 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 DLDP09622 509 aaKnown RBP13.11□□□□□ -0.31
CPNE1-201ENST00000317677 GSTT2P0CG29 244 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 GSTT2BP0CG30 244 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 IRF1P10914 325 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 HOXD9P28356 352 aaPredicted RBP13.11□□□□□ -0.31
CPNE1-201ENST00000317677 OR1E1P30953 314 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 MAPKAPK2P49137 400 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 TNK2Q07912 1038 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 CDH17Q12864 832 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 APOFQ13790 326 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 POLD3Q15054 466 aaPredicted RBP13.11□□□□□ -0.31
CPNE1-201ENST00000317677 RAB30Q15771 203 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 ANO4Q32M45 955 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 DEPDC1Q5TB30 811 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 MROH9Q5TGP6 573 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 RANBP10Q6VN20 620 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 SDR16C5Q8N3Y7 309 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 ARRDC2Q8TBH0 407 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 TRPC4APQ8TEL6 797 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 JADE3Q92613 823 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 PLD4Q96BZ4 506 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 PABPC5Q96DU9 382 aaKnown RBP13.11□□□□□ -0.31
CPNE1-201ENST00000317677 IMP4Q96G21 291 aaKnown RBP13.11□□□□□ -0.31
CPNE1-201ENST00000317677 CYP2S1Q96SQ9 504 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 ATXN3LQ9H3M9 355 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 SP110Q9HB58 689 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 MSRAQ9UJ68 235 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 AGO1Q9UL18 857 aaKnown RBP13.11□□□□□ -0.31
CPNE1-201ENST00000317677 AAR2Q9Y312 384 aaKnown RBP13.11□□□□□ -0.31
CPNE1-201ENST00000317677 BPTFQ12830 3046 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 CCDC78A2IDD5 438 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 FCHO1O14526 889 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 SCAMP3O14828 347 aaKnown RBP13.11□□□□□ -0.31
CPNE1-201ENST00000317677 TM9SF1O15321 606 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 PSMD3O43242 534 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 TGM5O43548 720 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 GREM1O60565 184 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 PRAMEF11O60813 436 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 ANXA9O76027 345 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 TNFAIP8O95379 198 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 TOP3BO95985 862 aaKnown RBP13.11□□□□□ -0.31
CPNE1-201ENST00000317677 EIF2S1P05198 315 aaKnown RBP13.11□□□□□ -0.31
CPNE1-201ENST00000317677 DHRS4L1P0CG22 281 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 PPM1AP35813 382 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 PPARGP37231 505 aaPredicted RBP13.11□□□□□ -0.31
CPNE1-201ENST00000317677 GEMP55040 296 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 AQP4P55087 323 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 DSC2Q02487 901 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 CDK18Q07002 472 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 IL10RBQ08334 325 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 FRG1Q14331 258 aaKnown RBP13.11□□□□□ -0.31
CPNE1-201ENST00000317677 TGFBIQ15582 683 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 PARP15Q460N3 678 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 C1orf146Q5VVC0 180 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 LILRA6Q6PI73 481 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 FIBCD1Q8N539 461 aa13.11□□□□□ -0.31
CPNE1-201ENST00000317677 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.11□□□□□ -0.31
CPNE1-201ENST00000317677 RBM15BQ8NDT2 890 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms