RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 ABCG1P45844 678 aa17.81■□□□□ 0.44
TPM1-203ENST00000317516 KIAA1024LP59773 190 aa17.81■□□□□ 0.44
TPM1-203ENST00000317516 ITKQ08881 620 aa17.81■□□□□ 0.44
TPM1-203ENST00000317516 ARMC12Q5T9G4 340 aa17.81■□□□□ 0.44
TPM1-203ENST00000317516 TIGD7Q6NT04 549 aaPredicted RBP17.81■□□□□ 0.44
TPM1-203ENST00000317516 PDZD3Q86UT5 571 aa17.81■□□□□ 0.44
TPM1-203ENST00000317516 PGBD5Q8N414 524 aa17.81■□□□□ 0.44
TPM1-203ENST00000317516 ARL10Q8N8L6 244 aa17.81■□□□□ 0.44
TPM1-203ENST00000317516 PLA2G15Q8NCC3 412 aa17.81■□□□□ 0.44
TPM1-203ENST00000317516 OR6C4Q8NGE1 309 aa17.81■□□□□ 0.44
TPM1-203ENST00000317516 SNIP1Q8TAD8 396 aaKnown RBP17.81■□□□□ 0.44
TPM1-203ENST00000317516 WDR26Q9H7D7 661 aa17.81■□□□□ 0.44
TPM1-203ENST00000317516 B4GALT6Q9UBX8 382 aa17.81■□□□□ 0.44
TPM1-203ENST00000317516 PCDHB1Q9Y5F3 818 aa17.81■□□□□ 0.44
TPM1-203ENST00000317516 DSPP15924 2871 aaKnown RBP17.8■□□□□ 0.44
TPM1-203ENST00000317516 SSU72P8A0A1W2PR75 194 aa17.8■□□□□ 0.44
TPM1-203ENST00000317516 AKR1B10O60218 316 aa17.8■□□□□ 0.44
TPM1-203ENST00000317516 TGM2P21980 687 aa17.8■□□□□ 0.44
TPM1-203ENST00000317516 VIPR1P32241 457 aa17.8■□□□□ 0.44
TPM1-203ENST00000317516 LSSP48449 732 aa17.8■□□□□ 0.44
TPM1-203ENST00000317516 MAXP61244 160 aa17.8■□□□□ 0.44
TPM1-203ENST00000317516 MMRN1Q13201 1228 aa17.8■□□□□ 0.44
TPM1-203ENST00000317516 ARHGEF7Q14155 803 aa17.8■□□□□ 0.44
TPM1-203ENST00000317516 PAFAH1B3Q15102 231 aaKnown RBP17.8■□□□□ 0.44
TPM1-203ENST00000317516 ISXQ2M1V0 245 aa17.8■□□□□ 0.44
TPM1-203ENST00000317516 TBC1D25Q3MII6 688 aa17.8■□□□□ 0.44
TPM1-203ENST00000317516 ZFYVE27Q5T4F4 411 aa17.8■□□□□ 0.44
TPM1-203ENST00000317516 PNCKQ6P2M8 343 aa17.8■□□□□ 0.44
TPM1-203ENST00000317516 RBM44Q6ZP01 1051 aaKnown RBP17.8■□□□□ 0.44
TPM1-203ENST00000317516 USP45Q70EL2 814 aa17.8■□□□□ 0.44
TPM1-203ENST00000317516 TEX26Q8N6G2 289 aa17.8■□□□□ 0.44
TPM1-203ENST00000317516 FUBP1Q96AE4 644 aaKnown RBP17.8■□□□□ 0.44
TPM1-203ENST00000317516 SCRN2Q96FV2 425 aa17.8■□□□□ 0.44
TPM1-203ENST00000317516 NSMCE3Q96MG7 304 aa17.8■□□□□ 0.44
TPM1-203ENST00000317516 ZNF578Q96N58 590 aaPredicted RBP17.8■□□□□ 0.44
TPM1-203ENST00000317516 RBM15Q96T37 977 aaKnown RBP eCLIP17.8■□□□□ 0.44
TPM1-203ENST00000317516 ZNF670Q9BS34 389 aa17.8■□□□□ 0.44
TPM1-203ENST00000317516 POLR1BQ9H9Y6 1135 aa17.8■□□□□ 0.44
TPM1-203ENST00000317516 NT5MQ9NPB1 228 aa17.8■□□□□ 0.44
TPM1-203ENST00000317516 NENFQ9UMX5 172 aa17.8■□□□□ 0.44
TPM1-203ENST00000317516 GPR34Q9UPC5 381 aa17.8■□□□□ 0.44
TPM1-203ENST00000317516 ZFYVE26Q68DK2 2539 aa17.8■□□□□ 0.44
TPM1-203ENST00000317516 PSMD11O00231 422 aa17.79■□□□□ 0.44
TPM1-203ENST00000317516 TLX3O43711 291 aaPredicted RBP17.79■□□□□ 0.44
TPM1-203ENST00000317516 HEXIM1O94992 359 aaKnown RBP17.79■□□□□ 0.44
TPM1-203ENST00000317516 CD48P09326 243 aa17.79■□□□□ 0.44
TPM1-203ENST00000317516 MX2P20592 715 aa17.79■□□□□ 0.44
TPM1-203ENST00000317516 GJC1P36383 396 aa17.79■□□□□ 0.44
TPM1-203ENST00000317516 GARSP41250 739 aaKnown RBP17.79■□□□□ 0.44
TPM1-203ENST00000317516 ARSEP51690 589 aa17.79■□□□□ 0.44
TPM1-203ENST00000317516 GALNT2Q10471 571 aa17.79■□□□□ 0.44
TPM1-203ENST00000317516 DPYSL3Q14195 570 aa17.79■□□□□ 0.44
TPM1-203ENST00000317516 IFI16Q16666 785 aaKnown RBP17.79■□□□□ 0.44
TPM1-203ENST00000317516 ANKRD20A8PQ5CZ79 823 aa17.79■□□□□ 0.44
TPM1-203ENST00000317516 PCDH19Q8TAB3 1148 aa17.79■□□□□ 0.44
TPM1-203ENST00000317516 NUS1Q96E22 293 aa17.79■□□□□ 0.44
TPM1-203ENST00000317516 COQ10AQ96MF6 247 aa17.79■□□□□ 0.44
TPM1-203ENST00000317516 DNAJC7Q99615 494 aa17.79■□□□□ 0.44
TPM1-203ENST00000317516 POLR1EQ9GZS1 481 aaKnown RBP17.79■□□□□ 0.44
TPM1-203ENST00000317516 AMACRQ9UHK6 382 aa17.79■□□□□ 0.44
TPM1-203ENST00000317516 TDRD6O60522 2096 aaKnown RBP17.79■□□□□ 0.44
TPM1-203ENST00000317516 TMEM202A6NGA9 273 aa17.78■□□□□ 0.44
TPM1-203ENST00000317516 MATN3O15232 486 aa17.78■□□□□ 0.44
TPM1-203ENST00000317516 PGLSO95336 258 aa17.78■□□□□ 0.44
TPM1-203ENST00000317516 MPOP05164 745 aa17.78■□□□□ 0.44
TPM1-203ENST00000317516 CELA2BP08218 269 aaPredicted RBP17.78■□□□□ 0.44
TPM1-203ENST00000317516 TMEM253P0C7T8 217 aa17.78■□□□□ 0.44
TPM1-203ENST00000317516 CCNCP24863 283 aa17.78■□□□□ 0.44
TPM1-203ENST00000317516 MAN1A1P33908 653 aa17.78■□□□□ 0.44
TPM1-203ENST00000317516 GABREP78334 506 aa17.78■□□□□ 0.44
TPM1-203ENST00000317516 TRAF2Q12933 501 aa17.78■□□□□ 0.44
TPM1-203ENST00000317516 CNGA3Q16281 694 aa17.78■□□□□ 0.44
TPM1-203ENST00000317516 ATP13A4Q4VNC1 1196 aa17.78■□□□□ 0.44
TPM1-203ENST00000317516 PERM1Q5SV97 790 aa17.78■□□□□ 0.44
TPM1-203ENST00000317516 DENND2CQ68D51 928 aa17.78■□□□□ 0.44
TPM1-203ENST00000317516 NCBP2-AS2Q69YL0 99 aa17.78■□□□□ 0.44
TPM1-203ENST00000317516 TAF8Q7Z7C8 310 aa17.78■□□□□ 0.44
TPM1-203ENST00000317516 FATE1Q969F0 183 aa17.78■□□□□ 0.44
TPM1-203ENST00000317516 CCDC42Q96M95 316 aa17.78■□□□□ 0.44
TPM1-203ENST00000317516 TSGA13Q96PP4 275 aa17.78■□□□□ 0.44
TPM1-203ENST00000317516 SEMA3CQ99985 751 aa17.78■□□□□ 0.44
TPM1-203ENST00000317516 CCDC3Q9BQI4 270 aa17.78■□□□□ 0.44
TPM1-203ENST00000317516 ANP32EQ9BTT0 268 aa17.78■□□□□ 0.44
TPM1-203ENST00000317516 TSPY26PQ9H489 355 aa17.78■□□□□ 0.44
TPM1-203ENST00000317516 PHPT1Q9NRX4 125 aaPredicted RBP17.78■□□□□ 0.44
TPM1-203ENST00000317516 SIRPGQ9P1W8 387 aa17.78■□□□□ 0.44
TPM1-203ENST00000317516 MOSPD1Q9UJG1 213 aa17.78■□□□□ 0.44
TPM1-203ENST00000317516 PPIL1Q9Y3C6 166 aa17.78■□□□□ 0.44
TPM1-203ENST00000317516 RAI2Q9Y5P3 530 aa17.78■□□□□ 0.44
TPM1-203ENST00000317516 CACNA1GO43497 2377 aa17.77■□□□□ 0.44
TPM1-203ENST00000317516 DXOO77932 396 aaKnown RBP17.77■□□□□ 0.44
TPM1-203ENST00000317516 CA4P22748 312 aa17.77■□□□□ 0.44
TPM1-203ENST00000317516 RBMS1P29558 406 aaKnown RBP17.77■□□□□ 0.44
TPM1-203ENST00000317516 EPHB1P54762 984 aa17.77■□□□□ 0.44
TPM1-203ENST00000317516 ERVPABLB-1P60509 514 aa17.77■□□□□ 0.44
TPM1-203ENST00000317516 SPIDRQ14159 915 aa17.77■□□□□ 0.44
TPM1-203ENST00000317516 ASTE1Q2TB18 679 aaPredicted RBP17.77■□□□□ 0.44
TPM1-203ENST00000317516 CRTC1Q6UUV9 634 aa17.77■□□□□ 0.44
TPM1-203ENST00000317516 CBARPQ8N350 705 aaPredicted RBP17.77■□□□□ 0.44
TPM1-203ENST00000317516 FAM46DQ8NEK8 389 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms