RNA–Protein interactions for RNA: ENST00000314191.6

PRKDC-201, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKDC, Length 13,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-201ENST00000314191 EVPLLA8MZ36 301 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 AZIN1O14977 448 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 LAG3P18627 525 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 SH3BGRP55822 239 aaPredicted RBP6.2□□□□□ -1.42
PRKDC-201ENST00000314191 RIPK1Q13546 671 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 ALFQ53S48 1182 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 RPS27LQ71UM5 84 aaKnown RBP6.2□□□□□ -1.42
PRKDC-201ENST00000314191 RNF145Q96MT1 663 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 OR52B2Q96RD2 323 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 C1orf50Q9BV19 199 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 ARHGEF3Q9NR81 526 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 KRT72Q14CN4 511 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 ASB2Q96Q27 587 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 ZFYVE1Q9HBF4 777 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 PARVBQ9HBI1 364 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 ARL5AQ9Y689 179 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 EME2A4GXA9 379 aaPredicted RBP6.2□□□□□ -1.42
PRKDC-201ENST00000314191 TRIM38O00635 465 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 SLC25A14O95258 325 aaPredicted RBP6.2□□□□□ -1.42
PRKDC-201ENST00000314191 ACOX1Q15067 660 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 SKIV2LQ15477 1246 aaKnown RBP6.2□□□□□ -1.42
PRKDC-201ENST00000314191 SLC9B1Q4ZJI4 515 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 PLD6Q8N2A8 252 aaKnown RBP6.2□□□□□ -1.42
PRKDC-201ENST00000314191 NSMCE2Q96MF7 247 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 PRPF18Q99633 342 aaKnown RBP6.2□□□□□ -1.42
PRKDC-201ENST00000314191 TMLHEQ9NVH6 421 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 MOCS1Q9NZB8 636 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 TLR6Q9Y2C9 796 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 KANSL1LA0AUZ9 987 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 ZNF487B1APH4 448 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 GJA1P17302 382 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 IGFBP6P24592 240 aaPredicted RBP6.2□□□□□ -1.42
PRKDC-201ENST00000314191 CTNNB1P35222 781 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 RBM20Q5T481 1227 aaKnown RBP6.2□□□□□ -1.42
PRKDC-201ENST00000314191 LPCAT4Q643R3 524 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 ZBTB49Q6ZSB9 765 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 KIAA0408Q6ZU52 694 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 PAQR9Q6ZVX9 377 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 BHLHE22Q8NFJ8 381 aaPredicted RBP6.2□□□□□ -1.42
PRKDC-201ENST00000314191 PANX3Q96QZ0 392 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 SGIP1Q9BQI5 828 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 CREBZFQ9NS37 354 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 KNL1Q8NG31 2342 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 TRAV19A0A0A6YYK7 116 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 RGSL1A5PLK6 1076 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 SYNDIG1LA6NDD5 238 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 CCDC154A6NI56 674 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 ZBTB14O43829 449 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 FASP25445 335 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 SLC1A2P43004 574 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 MAPKAPK2P49137 400 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 SLC18A2Q05940 514 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 GPR17Q13304 367 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 ERAP2Q6P179 960 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 LRRTM3Q86VH5 581 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 DENND1AQ8TEH3 1009 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 SLC12A4Q9UP95 1085 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 FAM189A1O60320 539 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 CPSF6Q16630 551 aaKnown RBP eCLIP6.2□□□□□ -1.428e-6■□□□□ 9.2
PRKDC-201ENST00000314191 SIRPB2Q5JXA9 342 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 NAPRTQ6XQN6 538 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 ZNF786Q8N393 782 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 VPS37AQ8NEZ2 397 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 BRSK1Q8TDC3 778 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 STN1Q9H668 368 aaKnown RBP6.2□□□□□ -1.42
PRKDC-201ENST00000314191 TOGARAM1Q9Y4F4 1720 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 IPO13O94829 963 aaKnown RBP6.2□□□□□ -1.42
PRKDC-201ENST00000314191 PCNAP12004 261 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 TSNQ15631 228 aaKnown RBP6.2□□□□□ -1.42
PRKDC-201ENST00000314191 NRF1Q16656 503 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 SYTL1Q8IYJ3 562 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 STK40Q8N2I9 435 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 FIG4Q92562 907 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 UBXN8O00124 270 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 SMNDC1O75940 238 aaKnown RBP eCLIP6.2□□□□□ -1.426e-8■■■□□ 19.1
PRKDC-201ENST00000314191 TM7SF2O76062 418 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 SIX3O95343 332 aaPredicted RBP6.2□□□□□ -1.42
PRKDC-201ENST00000314191 TTPAP49638 278 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 NEK3P51956 506 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 SLC44A2Q8IWA5 706 aaPredicted RBP6.2□□□□□ -1.42
PRKDC-201ENST00000314191 CNTD1Q8N815 330 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 ZMIZ2Q8NF64 920 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 RMND5AQ9H871 391 aa6.2□□□□□ -1.42
PRKDC-201ENST00000314191 TMEM247A6NEH6 219 aa6.19□□□□□ -1.42
PRKDC-201ENST00000314191 ENPP3O14638 875 aa6.19□□□□□ -1.42
PRKDC-201ENST00000314191 MGEA5O60502 916 aa6.19□□□□□ -1.42
PRKDC-201ENST00000314191 SNRPB2P08579 225 aaKnown RBP6.19□□□□□ -1.42
PRKDC-201ENST00000314191 ANXA5P08758 320 aa6.19□□□□□ -1.42
PRKDC-201ENST00000314191 CYP2A7P20853 494 aa6.19□□□□□ -1.42
PRKDC-201ENST00000314191 PSMA4P25789 261 aaKnown RBP6.19□□□□□ -1.42
PRKDC-201ENST00000314191 SLC18A1P54219 525 aa6.19□□□□□ -1.42
PRKDC-201ENST00000314191 OTUD3Q5T2D3 398 aaPredicted RBP6.19□□□□□ -1.42
PRKDC-201ENST00000314191 MYO19Q96H55 970 aa6.19□□□□□ -1.42
PRKDC-201ENST00000314191 CIDEBQ9UHD4 219 aa6.19□□□□□ -1.42
PRKDC-201ENST00000314191 DCLK1O15075 740 aa6.19□□□□□ -1.42
PRKDC-201ENST00000314191 SNAP91O60641 907 aa6.19□□□□□ -1.42
PRKDC-201ENST00000314191 PCDH8O95206 1070 aa6.19□□□□□ -1.42
PRKDC-201ENST00000314191 POLR2EP19388 210 aaKnown RBP6.19□□□□□ -1.42
PRKDC-201ENST00000314191 IRF8Q02556 426 aa6.19□□□□□ -1.42
PRKDC-201ENST00000314191 UCMAQ8WVF2 138 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms