RNA–Protein interactions for RNA: ENST00000312849.4

LSMEM1-201, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSMEM1, Length 1,870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-201ENST00000312849 NUP93Q8N1F7 819 aa9.68□□□□□ -0.86
LSMEM1-201ENST00000312849 PCDH20Q8N6Y1 951 aaKnown RBP9.68□□□□□ -0.86
LSMEM1-201ENST00000312849 RNF148Q8N7C7 305 aa9.68□□□□□ -0.86
LSMEM1-201ENST00000312849 OR6P1Q8NGX9 317 aa9.68□□□□□ -0.86
LSMEM1-201ENST00000312849 RHEBL1Q8TAI7 183 aa9.68□□□□□ -0.86
LSMEM1-201ENST00000312849 HMGCLL1Q8TB92 370 aa9.68□□□□□ -0.86
LSMEM1-201ENST00000312849 LPGAT1Q92604 370 aa9.68□□□□□ -0.86
LSMEM1-201ENST00000312849 HDAC10Q969S8 669 aa9.68□□□□□ -0.86
LSMEM1-201ENST00000312849 EME1Q96AY2 570 aa9.68□□□□□ -0.86
LSMEM1-201ENST00000312849 FEM1CQ96JP0 617 aa9.68□□□□□ -0.86
LSMEM1-201ENST00000312849 ZNF597Q96LX8 424 aa9.68□□□□□ -0.86
LSMEM1-201ENST00000312849 CNBD2Q96M20 576 aa9.68□□□□□ -0.86
LSMEM1-201ENST00000312849 HOPXQ9BPY8 73 aaPredicted RBP9.68□□□□□ -0.86
LSMEM1-201ENST00000312849 ERVK-6Q9BXR3 956 aa9.68□□□□□ -0.86
LSMEM1-201ENST00000312849 AGO3Q9H9G7 860 aaKnown RBP9.68□□□□□ -0.86
LSMEM1-201ENST00000312849 NMUR1Q9HB89 426 aa9.68□□□□□ -0.86
LSMEM1-201ENST00000312849 GBF1Q92538 1859 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 SUPT7LO94864 414 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 GLP2RO95838 553 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 FGF1P05230 155 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 TFAP2AP05549 437 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 ZNF26P17031 533 aaPredicted RBP9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 OGNP20774 298 aaKnown RBP9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 KCNA5P22460 613 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 CD52P31358 61 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 MSX2P35548 267 aaPredicted RBP9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 PBX3P40426 434 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 SUOXP51687 545 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 YBEYP58557 167 aaPredicted RBP9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 NKX3-2P78367 333 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 TXNL4AP83876 142 aaKnown RBP9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 MYBPC1Q00872 1141 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 APOFQ13790 326 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 TRIP4Q15650 581 aaPredicted RBP9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 SLC5A9Q2M3M2 681 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 TMEM259Q4ZIN3 620 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 PAN2Q504Q3 1202 aaKnown RBP9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 UNC50Q53HI1 259 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 ZNF789Q5FWF6 425 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 SIRPB2Q5JXA9 342 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 IL23RQ5VWK5 629 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 PAOXQ6QHF9 649 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 B3GNT6Q6ZMB0 384 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 PTAR1Q7Z6K3 402 aaPredicted RBP9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 ISCA2Q86U28 154 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 DHFR2Q86XF0 187 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 SCN4BQ8IWT1 228 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 PACRGLQ8N7B6 248 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 ANKFN1Q8N957 763 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 TSPEARQ8WU66 669 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 ATP6V1E2Q96A05 226 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 PHF21BQ96EK2 531 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 C19orf60Q96EN9 201 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 HMCESQ96FZ2 354 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 BTN2A3PQ96KV6 586 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 UNKQ9C0B0 810 aaKnown RBP9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 ZCWPW1Q9H0M4 648 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 RETREG1Q9H6L5 497 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 C8orf4Q9NR00 106 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 RGS18Q9NS28 235 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 CCDC167Q9P0B6 97 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 DMTF1Q9Y222 760 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 FIS1Q9Y3D6 152 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 SQORQ9Y6N5 450 aa9.67□□□□□ -0.86
LSMEM1-201ENST00000312849 DYTNA2CJ06 578 aa9.66□□□□□ -0.86
LSMEM1-201ENST00000312849 ANKRD33BA6NCL7 494 aa9.66□□□□□ -0.86
LSMEM1-201ENST00000312849 DRGXA6NNA5 263 aa9.66□□□□□ -0.86
LSMEM1-201ENST00000312849 TMEM189-UBE2V1I3L0A0 370 aa9.66□□□□□ -0.86
LSMEM1-201ENST00000312849 PDLIM1O00151 329 aa9.66□□□□□ -0.86
LSMEM1-201ENST00000312849 MGEA5O60502 916 aa9.66□□□□□ -0.86
LSMEM1-201ENST00000312849 RPP40O75818 363 aaKnown RBP9.66□□□□□ -0.86
LSMEM1-201ENST00000312849 OAZ2O95190 189 aa9.66□□□□□ -0.86
LSMEM1-201ENST00000312849 TCN1P20061 433 aaPredicted RBP9.66□□□□□ -0.86
LSMEM1-201ENST00000312849 GPX3P22352 226 aa9.66□□□□□ -0.86
LSMEM1-201ENST00000312849 MAGEA11P43364 429 aa9.66□□□□□ -0.86
LSMEM1-201ENST00000312849 MAPKAPK2P49137 400 aa9.66□□□□□ -0.86
LSMEM1-201ENST00000312849 CDKN2DP55273 166 aa9.66□□□□□ -0.86
LSMEM1-201ENST00000312849 DSC2Q02487 901 aa9.66□□□□□ -0.86
LSMEM1-201ENST00000312849 SLC10A7Q0GE19 358 aa9.66□□□□□ -0.86
LSMEM1-201ENST00000312849 TAF1CQ15572 869 aaPredicted RBP9.66□□□□□ -0.86
LSMEM1-201ENST00000312849 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.66□□□□□ -0.86
LSMEM1-201ENST00000312849 SLC39A12Q504Y0 691 aa9.66□□□□□ -0.86
LSMEM1-201ENST00000312849 COQ5Q5HYK3 327 aa9.66□□□□□ -0.86
LSMEM1-201ENST00000312849 MS4A13Q5J8X5 152 aa9.66□□□□□ -0.86
LSMEM1-201ENST00000312849 C6orf52Q5T4I8 152 aa9.66□□□□□ -0.86
LSMEM1-201ENST00000312849 ZNF280DQ6N043 979 aa9.66□□□□□ -0.86
LSMEM1-201ENST00000312849 EFL1Q7Z2Z2 1120 aaKnown RBP9.66□□□□□ -0.86
LSMEM1-201ENST00000312849 HERC6Q8IVU3 1022 aa9.66□□□□□ -0.86
LSMEM1-201ENST00000312849 GALNT4Q8N4A0 578 aa9.66□□□□□ -0.86
LSMEM1-201ENST00000312849 ARRDC2Q8TBH0 407 aa9.66□□□□□ -0.86
LSMEM1-201ENST00000312849 ANKRD49Q8WVL7 239 aa9.66□□□□□ -0.86
LSMEM1-201ENST00000312849 ZNF599Q96NL3 588 aa9.66□□□□□ -0.86
LSMEM1-201ENST00000312849 ADAM2Q99965 735 aa9.66□□□□□ -0.86
LSMEM1-201ENST00000312849 MUC13Q9H3R2 512 aa9.66□□□□□ -0.86
LSMEM1-201ENST00000312849 TFB2MQ9H5Q4 396 aaKnown RBP9.66□□□□□ -0.86
LSMEM1-201ENST00000312849 ALG9Q9H6U8 611 aa9.66□□□□□ -0.86
LSMEM1-201ENST00000312849 PFDN4Q9NQP4 134 aa9.66□□□□□ -0.86
LSMEM1-201ENST00000312849 ARMC1Q9NVT9 282 aa9.66□□□□□ -0.86
LSMEM1-201ENST00000312849 GID8Q9NWU2 228 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms