RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 NEK5Q6P3R8 708 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 ABI3BPQ7Z7G0 1075 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 HTR3CQ8WXA8 447 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 RAB7BQ96AH8 199 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 IMP4Q96G21 291 aaKnown RBP12.08□□□□□ -0.48
SCFD1-201ENST00000311943 KLHDC7BQ96G42 594 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 MS4A14Q96JA4 679 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 TEKT5Q96M29 485 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 QKIQ96PU8 341 aaKnown RBP eCLIP12.08□□□□□ -0.488e-7■■■■■ 54.9
SCFD1-201ENST00000311943 ELF4Q99607 663 aaPredicted RBP12.08□□□□□ -0.48
SCFD1-201ENST00000311943 TMEM121Q9BTD3 319 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 ABCG8Q9H221 673 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 SUDS3Q9H7L9 328 aaPredicted RBP12.08□□□□□ -0.48
SCFD1-201ENST00000311943 USP29Q9HBJ7 922 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 GLOD4Q9HC38 313 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 PCDH9Q9HC56 1237 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 PIH1D1Q9NWS0 290 aaKnown RBP12.08□□□□□ -0.48
SCFD1-201ENST00000311943 DNPEPQ9ULA0 475 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 SPO11Q9Y5K1 396 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 NCOR2Q9Y618 2525 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 PRR5-ARHGAP8B1AHC4 643 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 FANCGO15287 622 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 KCNN4O15554 427 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 LZTS3O60299 673 aaPredicted RBP12.08□□□□□ -0.48
SCFD1-201ENST00000311943 OPHN1O60890 802 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 USP12O75317 370 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 FUCA1P04066 466 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 SYPP08247 313 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 C1SP09871 688 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 ZFXP17010 805 aaPredicted RBP12.08□□□□□ -0.48
SCFD1-201ENST00000311943 ARHGAP8P85298 464 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 C1orf61Q13536 156 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 ACOX1Q15067 660 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 CDKN3Q16667 212 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 QPCTQ16769 361 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 SLC45A4Q5BKX6 768 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 PPM1JQ5JR12 505 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 DPPA4Q7L190 304 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 TRIM74Q86UV6 250 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 LRRC49Q8IUZ0 686 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 SLC25A45Q8N413 288 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 SLC25A41Q8N5S1 370 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 RNF10Q8N5U6 811 aaKnown RBP12.08□□□□□ -0.48
SCFD1-201ENST00000311943 MFSD2AQ8NA29 543 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 TRIB3Q96RU7 358 aa12.08□□□□□ -0.48
SCFD1-201ENST00000311943 DNAAF2Q9NVR5 837 aaKnown RBP12.08□□□□□ -0.48
SCFD1-201ENST00000311943 KLHL8Q9P2G9 620 aaPredicted RBP12.08□□□□□ -0.48
SCFD1-201ENST00000311943 PCYT1BQ9Y5K3 369 aaPredicted RBP12.08□□□□□ -0.48
SCFD1-201ENST00000311943 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.07□□□□□ -0.48
SCFD1-201ENST00000311943 TMEM202A6NGA9 273 aa12.07□□□□□ -0.48
SCFD1-201ENST00000311943 PCNX2A6NKB5 2137 aa12.07□□□□□ -0.48
SCFD1-201ENST00000311943 GPR39O43194 453 aa12.07□□□□□ -0.48
SCFD1-201ENST00000311943 SOCS5O75159 536 aa12.07□□□□□ -0.48
SCFD1-201ENST00000311943 HEXIM1O94992 359 aaKnown RBP12.07□□□□□ -0.48
SCFD1-201ENST00000311943 ELFN1P0C7U0 828 aa12.07□□□□□ -0.48
SCFD1-201ENST00000311943 AKT2P31751 481 aa12.07□□□□□ -0.48
SCFD1-201ENST00000311943 CA5AP35218 305 aa12.07□□□□□ -0.48
SCFD1-201ENST00000311943 NR2C2P49116 596 aa12.07□□□□□ -0.48
SCFD1-201ENST00000311943 NOVA1P51513 510 aaKnown RBP12.07□□□□□ -0.48
SCFD1-201ENST00000311943 PFN3P60673 137 aa12.07□□□□□ -0.48
SCFD1-201ENST00000311943 EIF2B5Q13144 721 aaKnown RBP12.07□□□□□ -0.48
SCFD1-201ENST00000311943 SIX1Q15475 284 aaPredicted RBP12.07□□□□□ -0.48
SCFD1-201ENST00000311943 SYCE1Q8N0S2 351 aa12.07□□□□□ -0.48
SCFD1-201ENST00000311943 BBS5Q8N3I7 341 aa12.07□□□□□ -0.48
SCFD1-201ENST00000311943 FAM71DQ8N9W8 422 aa12.07□□□□□ -0.48
SCFD1-201ENST00000311943 SETD7Q8WTS6 366 aaKnown RBP12.07□□□□□ -0.48
SCFD1-201ENST00000311943 NAT14Q8WUY8 206 aa12.07□□□□□ -0.48
SCFD1-201ENST00000311943 TSACCQ96A04 125 aaPredicted RBP12.07□□□□□ -0.48
SCFD1-201ENST00000311943 TADA1Q96BN2 335 aa12.07□□□□□ -0.48
SCFD1-201ENST00000311943 SCRN2Q96FV2 425 aa12.07□□□□□ -0.48
SCFD1-201ENST00000311943 WDR24Q96S15 920 aa12.07□□□□□ -0.48
SCFD1-201ENST00000311943 MLPHQ9BV36 600 aaPredicted RBP12.07□□□□□ -0.48
SCFD1-201ENST00000311943 ARFGAP3Q9NP61 516 aa12.07□□□□□ -0.48
SCFD1-201ENST00000311943 DMTF1Q9Y222 760 aa12.07□□□□□ -0.48
SCFD1-201ENST00000311943 FREM2Q5SZK8 3169 aa12.07□□□□□ -0.48
SCFD1-201ENST00000311943 ARID1BQ8NFD5 2236 aaPredicted RBP12.07□□□□□ -0.48
SCFD1-201ENST00000311943 A0A0J9YYE9 177 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 A0A1B0GTQ1 180 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 KCNK5O95279 499 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 METTL18O95568 372 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 AGTP01019 485 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 TRBC1P01850 177 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 ATP1A1P05023 1023 aaKnown RBP12.06□□□□□ -0.48
SCFD1-201ENST00000311943 ZSCAN5DPP0CG00 497 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 GIMD1P0DJR0 217 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 PSMB4P28070 264 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 HSPA9P38646 679 aaKnown RBP12.06□□□□□ -0.48
SCFD1-201ENST00000311943 LIMK1P53667 647 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 PUM1Q14671 1186 aaKnown RBP eCLIP12.06□□□□□ -0.48
SCFD1-201ENST00000311943 TEAD4Q15561 434 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 CCDC157Q569K6 752 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 ERAP2Q6P179 960 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 DARS2Q6PI48 645 aaKnown RBP12.06□□□□□ -0.48
SCFD1-201ENST00000311943 KDELC1Q6UW63 502 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 LYSMD3Q7Z3D4 306 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 DGLUCYQ7Z3D6 616 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 RD3Q7Z3Z2 195 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 PIP4P1Q86T03 277 aa12.06□□□□□ -0.48
SCFD1-201ENST00000311943 CBARPQ8N350 705 aaPredicted RBP12.06□□□□□ -0.48
SCFD1-201ENST00000311943 SLC35F6Q8N357 371 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms