RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 MTFMTQ96DP5 389 aaKnown RBP8.21□□□□□ -1.09
VPS41-202ENST00000310301 VPS35Q96QK1 796 aa8.21□□□□□ -1.09
VPS41-202ENST00000310301 KCNMB3Q9NPA1 279 aa8.21□□□□□ -1.09
VPS41-202ENST00000310301 TRPV5Q9NQA5 729 aa8.21□□□□□ -1.09
VPS41-202ENST00000310301 MCUBQ9NWR8 336 aa8.21□□□□□ -1.09
VPS41-202ENST00000310301 PRKAG3Q9UGI9 489 aa8.21□□□□□ -1.09
VPS41-202ENST00000310301 SSR3Q9UNL2 185 aa8.21□□□□□ -1.09
VPS41-202ENST00000310301 SPEF1Q9Y4P9 236 aa8.21□□□□□ -1.09
VPS41-202ENST00000310301 LYVE1Q9Y5Y7 322 aa8.21□□□□□ -1.09
VPS41-202ENST00000310301 A0A1W2PQ72 361 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 PEX10O60683 326 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 NOS1APO75052 506 aaPredicted RBP8.21□□□□□ -1.1
VPS41-202ENST00000310301 TCF4P15884 667 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 GLRA2P23416 452 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 GJA5P36382 358 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 POLD2P49005 469 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 EML3Q32P44 896 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 C6orf52Q5T4I8 152 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 BICRALQ6AI39 1079 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 RETSATQ6NUM9 610 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 CRTC3Q6UUV7 619 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 RP9Q8TA86 221 aaKnown RBP8.21□□□□□ -1.1
VPS41-202ENST00000310301 TAS1R2Q8TE23 839 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 C2orf15Q8WU43 125 aaKnown RBP8.21□□□□□ -1.1
VPS41-202ENST00000310301 RCN3Q96D15 328 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 MED8Q96G25 268 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 HGH1Q9BTY7 390 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 IRF2BPLQ9H1B7 796 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 MAN1C1Q9NR34 630 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 ARL8BQ9NVJ2 186 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 FAM25EA8MYX2 175 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 SPTLC1O15269 473 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 ITGALP20701 1170 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 SCNN1BP51168 640 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 COPZ1P61923 177 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 DPYSL3Q14195 570 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 LRRC32Q14392 662 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 NTRK3Q16288 839 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 HECTD3Q5T447 861 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 ZNF470Q6ECI4 717 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 FUT10Q6P4F1 479 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 KCNT2Q6UVM3 1135 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 TDHQ8IZJ6 230 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 ASB2Q96Q27 587 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 ZFP14Q9HCL3 533 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 FBXO6Q9NRD1 293 aaPredicted RBP8.21□□□□□ -1.1
VPS41-202ENST00000310301 COQ6Q9Y2Z9 468 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.21□□□□□ -1.1
VPS41-202ENST00000310301 C1QBPQ07021 282 aaKnown RBP8.21□□□□□ -1.1
VPS41-202ENST00000310301 RIPK1Q13546 671 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 DPYSQ14117 519 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 MED22Q15528 200 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 FAM187BQ17R55 369 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 GDF6Q6KF10 455 aaPredicted RBP8.21□□□□□ -1.1
VPS41-202ENST00000310301 ARMC6Q6NXE6 501 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 BTN2A1Q7KYR7 527 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 PQLC1Q8N2U9 271 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 Q96MT0 163 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 NSUN3Q9H649 340 aaKnown RBP8.21□□□□□ -1.1
VPS41-202ENST00000310301 SLCO1B3Q9NPD5 702 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 C8orf4Q9NR00 106 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 AP3M1Q9Y2T2 418 aa8.21□□□□□ -1.1
VPS41-202ENST00000310301 DHRS12A0PJE2 317 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 CAPN8A6NHC0 703 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 H3BMM5 538 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 CDC40O60508 579 aaKnown RBP eCLIP8.2□□□□□ -1.1
VPS41-202ENST00000310301 ERVK-10P10266 1014 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 HDCP19113 662 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 BST1Q10588 318 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 BST2Q10589 180 aaKnown RBP8.2□□□□□ -1.1
VPS41-202ENST00000310301 MEA1Q16626 185 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 UNC93AQ86WB7 457 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 MIB1Q86YT6 1006 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 HTR3CQ8WXA8 447 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 CDHR5Q9HBB8 845 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 EFR3BQ9Y2G0 817 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 TDRKHQ9Y2W6 561 aaKnown RBP8.2□□□□□ -1.1
VPS41-202ENST00000310301 PCDHB9Q9Y5E1 797 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 MAFBQ9Y5Q3 323 aaPredicted RBP8.2□□□□□ -1.1
VPS41-202ENST00000310301 IQCMA0A1B0GVH7 501 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 GSC2O15499 205 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 FADS2O95864 444 aaKnown RBP8.2□□□□□ -1.1
VPS41-202ENST00000310301 DHFRP00374 187 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 ASS1P00966 412 aaKnown RBP8.2□□□□□ -1.1
VPS41-202ENST00000310301 APODP05090 189 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 CST5P28325 142 aaPredicted RBP8.2□□□□□ -1.1
VPS41-202ENST00000310301 TPGS2Q68CL5 300 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 DEPDC4Q8N2C3 294 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 KREMEN2Q8NCW0 462 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 TBATAQ96M53 351 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 PTPN18Q99952 460 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 SEMA4BQ9NPR2 832 aaPredicted RBP8.2□□□□□ -1.1
VPS41-202ENST00000310301 SIK3Q9Y2K2 1263 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 RGPD2P0DJD1 1756 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 LACTBL1A8MY62 500 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 IFRD1O00458 451 aaPredicted RBP8.2□□□□□ -1.1
VPS41-202ENST00000310301 CHRNGP07510 517 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 IQCF3P0C7M6 154 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 CCDC166P0CW27 439 aa8.2□□□□□ -1.1
VPS41-202ENST00000310301 CYP4B1P13584 511 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms