RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 TIGARQ9NQ88 270 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 IL17RBQ9NRM6 502 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 INTS10Q9NVR2 710 aaKnown RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 VPS4AQ9UN37 437 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 SNX8Q9Y5X2 465 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 PIKFYVEQ9Y2I7 2098 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 PTPRJQ12913 1337 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 BTBD19C9JJ37 291 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 GPR25O00155 361 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 TBL1XO60907 577 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 LARGE1O95461 756 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 TNFP01375 233 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 EPOP01588 193 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 ERCC1P07992 297 aaPredicted RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 KDELR1P24390 212 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 PIK3CBP42338 1070 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 NEK3P51956 506 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 PTPN5P54829 565 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 AP1S2P56377 157 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 HSD17B7P56937 341 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 DDR1Q08345 913 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 PDSS1Q5T2R2 415 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 TTC33Q6PID6 262 aaPredicted RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 DNM1P34Q6PK57 102 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 KDM7AQ6ZMT4 941 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 FAM20CQ8IXL6 584 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 CAMKVQ8NCB2 501 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 FBXO36Q8NEA4 188 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 OR4L1Q8NH43 312 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 PHOSPHO2Q8TCD6 241 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 PHF10Q8WUB8 498 aaKnown RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 RFKQ969G6 155 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 ZDHHC12Q96GR4 267 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 HSD17B14Q9BPX1 270 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 SH2D3AQ9BRG2 576 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 PELOQ9BRX2 385 aaKnown RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 PCYOX1Q9UHG3 505 aa3.2□□□□□ -1.9
CLOCK-201ENST00000309964 AHDC1Q5TGY3 1603 aaPredicted RBP3.2□□□□□ -1.9
CLOCK-201ENST00000309964 CHST10O43529 356 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 PEX1O43933 1283 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 ZNF217O75362 1048 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 LATS1O95835 1130 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 ADH1BP00325 375 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 PGK1P00558 417 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 HBQ1P09105 142 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 LTA4HP09960 611 aaKnown RBP3.19□□□□□ -1.9
CLOCK-201ENST00000309964 MIPP30301 263 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 MPIP34949 423 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 VHLP40337 213 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 ALDH9A1P49189 494 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 NUDT2P50583 147 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 GMFBP60983 142 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 RPS7P62081 194 aaKnown RBP3.19□□□□□ -1.9
CLOCK-201ENST00000309964 IL10RBQ08334 325 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 BNIP2Q12982 314 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 IL18R1Q13478 541 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 GALNTL6Q49A17 601 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 FIP1L1Q6UN15 594 aaKnown RBP3.19□□□□□ -1.9
CLOCK-201ENST00000309964 SLC36A4Q6YBV0 504 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 C12orf40Q86WS4 652 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 PROSER1Q86XN7 944 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 SYT12Q8IV01 421 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 ZCCHC9Q8N567 271 aaKnown RBP3.19□□□□□ -1.9
CLOCK-201ENST00000309964 TC2NQ8N9U0 490 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 LPCAT1Q8NF37 534 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 ZFRQ96KR1 1074 aaKnown RBP3.19□□□□□ -1.9
CLOCK-201ENST00000309964 RNF145Q96MT1 663 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 NEDD4LQ96PU5 975 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 LPIN3Q9BQK8 851 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 TMEM121Q9BTD3 319 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 ELAC1Q9H777 363 aaKnown RBP3.19□□□□□ -1.9
CLOCK-201ENST00000309964 SPAG4Q9NPE6 437 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 SERINC1Q9NRX5 453 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 KCNK4Q9NYG8 393 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 PHTF1Q9UMS5 762 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 TLR6Q9Y2C9 796 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 COQ6Q9Y2Z9 468 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 COL3A1P02461 1466 aaPredicted RBP3.19□□□□□ -1.9
CLOCK-201ENST00000309964 CNTNAP1P78357 1384 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 A0A096LPK6 155 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 BTN3A1O00481 513 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 TRIM3O75382 744 aaPredicted RBP3.19□□□□□ -1.9
CLOCK-201ENST00000309964 RNASEH2AO75792 299 aaKnown RBP3.19□□□□□ -1.9
CLOCK-201ENST00000309964 BMP4P12644 408 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 NR4A1P22736 598 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 CXCR3P49682 368 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 ANTXR2P58335 489 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 CCDC142Q17RM4 750 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 CBWD6Q4V339 395 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 DGKKQ5KSL6 1271 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 CDKAL1Q5VV42 579 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 ZNF549Q6P9A3 640 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 RPTNQ6XPR3 784 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 BNC2Q6ZN30 1099 aaPredicted RBP3.19□□□□□ -1.9
CLOCK-201ENST00000309964 DCP2Q8IU60 420 aaKnown RBP3.19□□□□□ -1.9
CLOCK-201ENST00000309964 KIAA0319LQ8IZA0 1049 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 TMEM145Q8NBT3 493 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 ETNPPLQ8TBG4 499 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 SPPL2AQ8TCT8 520 aa3.19□□□□□ -1.9
CLOCK-201ENST00000309964 USP33Q8TEY7 942 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms