RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 VIPR1P32241 457 aa9.12□□□□□ -0.95
PDE4D-201ENST00000309641 GRIA1P42261 906 aa9.12□□□□□ -0.95
PDE4D-201ENST00000309641 RPS21P63220 83 aaKnown RBP9.12□□□□□ -0.95
PDE4D-201ENST00000309641 SPEM2Q0P670 501 aa9.12□□□□□ -0.95
PDE4D-201ENST00000309641 ELP6Q0PNE2 266 aa9.12□□□□□ -0.95
PDE4D-201ENST00000309641 MPP3Q13368 585 aa9.12□□□□□ -0.95
PDE4D-201ENST00000309641 SLC1A5Q15758 541 aa9.12□□□□□ -0.95
PDE4D-201ENST00000309641 SLC14A2Q15849 920 aa9.12□□□□□ -0.95
PDE4D-201ENST00000309641 LRRC66Q68CR7 880 aa9.12□□□□□ -0.95
PDE4D-201ENST00000309641 DENND5AQ6IQ26 1287 aa9.12□□□□□ -0.95
PDE4D-201ENST00000309641 ERAP2Q6P179 960 aa9.12□□□□□ -0.95
PDE4D-201ENST00000309641 NEK5Q6P3R8 708 aa9.12□□□□□ -0.95
PDE4D-201ENST00000309641 RANBP10Q6VN20 620 aa9.12□□□□□ -0.95
PDE4D-201ENST00000309641 MICALCLQ6ZW33 695 aa9.12□□□□□ -0.95
PDE4D-201ENST00000309641 HSD11B1LQ7Z5J1 315 aa9.12□□□□□ -0.95
PDE4D-201ENST00000309641 ZSCAN30Q86W11 494 aa9.12□□□□□ -0.95
PDE4D-201ENST00000309641 SYT12Q8IV01 421 aa9.12□□□□□ -0.95
PDE4D-201ENST00000309641 KLHL7Q8IXQ5 586 aa9.12□□□□□ -0.95
PDE4D-201ENST00000309641 CBARPQ8N350 705 aaPredicted RBP9.12□□□□□ -0.95
PDE4D-201ENST00000309641 ATL2Q8NHH9 583 aa9.12□□□□□ -0.95
PDE4D-201ENST00000309641 IFT43Q96FT9 208 aa9.12□□□□□ -0.95
PDE4D-201ENST00000309641 SERAC1Q96JX3 654 aa9.12□□□□□ -0.95
PDE4D-201ENST00000309641 SLC17A9Q9BYT1 436 aa9.12□□□□□ -0.95
PDE4D-201ENST00000309641 PCED1AQ9H1Q7 454 aa9.12□□□□□ -0.95
PDE4D-201ENST00000309641 TM9SF3Q9HD45 589 aa9.12□□□□□ -0.95
PDE4D-201ENST00000309641 MBNL1Q9NR56 388 aaKnown RBP9.12□□□□□ -0.95
PDE4D-201ENST00000309641 RAB6BQ9NRW1 208 aa9.12□□□□□ -0.95
PDE4D-201ENST00000309641 VPS45Q9NRW7 570 aa9.12□□□□□ -0.95
PDE4D-201ENST00000309641 HOMER3Q9NSC5 361 aa9.12□□□□□ -0.95
PDE4D-201ENST00000309641 RXFP3Q9NSD7 469 aa9.12□□□□□ -0.95
PDE4D-201ENST00000309641 NEU2Q9Y3R4 380 aa9.12□□□□□ -0.95
PDE4D-201ENST00000309641 ARIH1Q9Y4X5 557 aaPredicted RBP9.12□□□□□ -0.95
PDE4D-201ENST00000309641 DCHS1Q96JQ0 3298 aa9.12□□□□□ -0.95
PDE4D-201ENST00000309641 PIEZO1Q92508 2521 aa9.11□□□□□ -0.95
PDE4D-201ENST00000309641 TCRBV7S3A2A0A539 114 aa9.11□□□□□ -0.95
PDE4D-201ENST00000309641 CAPN8A6NHC0 703 aa9.11□□□□□ -0.95
PDE4D-201ENST00000309641 BUD23O43709 281 aaKnown RBP9.11□□□□□ -0.95
PDE4D-201ENST00000309641 ANXA9O76027 345 aa9.11□□□□□ -0.95
PDE4D-201ENST00000309641 RECQL5O94762 991 aaPredicted RBP9.11□□□□□ -0.95
PDE4D-201ENST00000309641 URI1O94763 535 aaPredicted RBP9.11□□□□□ -0.95
PDE4D-201ENST00000309641 SLC4A1P02730 911 aa9.11□□□□□ -0.95
PDE4D-201ENST00000309641 RETP07949 1114 aa9.11□□□□□ -0.95
PDE4D-201ENST00000309641 ELFN1P0C7U0 828 aa9.11□□□□□ -0.95
PDE4D-201ENST00000309641 CSNK1EP49674 416 aaKnown RBP9.11□□□□□ -0.95
PDE4D-201ENST00000309641 GEMP55040 296 aa9.11□□□□□ -0.95
PDE4D-201ENST00000309641 IRX4P78413 519 aa9.11□□□□□ -0.95
PDE4D-201ENST00000309641 BNC1Q01954 994 aa9.11□□□□□ -0.95
PDE4D-201ENST00000309641 PTSQ03393 145 aa9.11□□□□□ -0.95
PDE4D-201ENST00000309641 SF3A2Q15428 464 aaKnown RBP9.11□□□□□ -0.95
PDE4D-201ENST00000309641 PLA2G2CQ5R387 149 aa9.11□□□□□ -0.95
PDE4D-201ENST00000309641 KIAA1161Q6NSJ0 714 aa9.11□□□□□ -0.95
PDE4D-201ENST00000309641 Q6ZVL8 140 aa9.11□□□□□ -0.95
PDE4D-201ENST00000309641 USP45Q70EL2 814 aa9.11□□□□□ -0.95
PDE4D-201ENST00000309641 LYSMD3Q7Z3D4 306 aa9.11□□□□□ -0.95
PDE4D-201ENST00000309641 TMEM145Q8NBT3 493 aa9.11□□□□□ -0.95
PDE4D-201ENST00000309641 CXorf40AQ8TE69 158 aa9.11□□□□□ -0.95
PDE4D-201ENST00000309641 BMFQ96LC9 184 aa9.11□□□□□ -0.95
PDE4D-201ENST00000309641 FSD1LQ9BXM9 530 aa9.11□□□□□ -0.95
PDE4D-201ENST00000309641 ADGRE3Q9BY15 652 aa9.11□□□□□ -0.95
PDE4D-201ENST00000309641 CD84Q9UIB8 345 aa9.11□□□□□ -0.95
PDE4D-201ENST00000309641 ADAMTS9Q9P2N4 1935 aa9.11□□□□□ -0.95
PDE4D-201ENST00000309641 C1orf232A0A0U1RR37 186 aa9.1□□□□□ -0.95
PDE4D-201ENST00000309641 A0A1W2PQ67 120 aa9.1□□□□□ -0.95
PDE4D-201ENST00000309641 K7ESM1 405 aa9.1□□□□□ -0.95
PDE4D-201ENST00000309641 BCAT2O15382 392 aaPredicted RBP9.1□□□□□ -0.95
PDE4D-201ENST00000309641 TM7SF2O76062 418 aa9.1□□□□□ -0.95
PDE4D-201ENST00000309641 KRT14P02533 472 aa9.1□□□□□ -0.95
PDE4D-201ENST00000309641 CFIP05156 583 aa9.1□□□□□ -0.95
PDE4D-201ENST00000309641 C1SP09871 688 aa9.1□□□□□ -0.95
PDE4D-201ENST00000309641 TPH1P17752 444 aa9.1□□□□□ -0.95
PDE4D-201ENST00000309641 CA4P22748 312 aa9.1□□□□□ -0.95
PDE4D-201ENST00000309641 ETV3P41162 512 aa9.1□□□□□ -0.95
PDE4D-201ENST00000309641 PTGIRP43119 386 aa9.1□□□□□ -0.95
PDE4D-201ENST00000309641 GRIA4P48058 902 aa9.1□□□□□ -0.95
PDE4D-201ENST00000309641 SUOXP51687 545 aa9.1□□□□□ -0.95
PDE4D-201ENST00000309641 RPL26P61254 145 aaKnown RBP9.1□□□□□ -0.95
PDE4D-201ENST00000309641 C2orf54Q08AI8 447 aa9.1□□□□□ -0.95
PDE4D-201ENST00000309641 MSLNQ13421 630 aaPredicted RBP9.1□□□□□ -0.95
PDE4D-201ENST00000309641 MTM1Q13496 603 aa9.1□□□□□ -0.95
PDE4D-201ENST00000309641 PRPSAP1Q14558 356 aa9.1□□□□□ -0.95
PDE4D-201ENST00000309641 ACOX1Q15067 660 aa9.1□□□□□ -0.95
PDE4D-201ENST00000309641 WSCD2Q2TBF2 565 aa9.1□□□□□ -0.95
PDE4D-201ENST00000309641 WDR45BQ5MNZ6 344 aa9.1□□□□□ -0.95
PDE4D-201ENST00000309641 PEAR1Q5VY43 1037 aaPredicted RBP9.1□□□□□ -0.95
PDE4D-201ENST00000309641 TP53I13Q8NBR0 393 aaPredicted RBP9.1□□□□□ -0.95
PDE4D-201ENST00000309641 PLA2G15Q8NCC3 412 aa9.1□□□□□ -0.95
PDE4D-201ENST00000309641 CENPTQ96BT3 561 aa9.1□□□□□ -0.95
PDE4D-201ENST00000309641 LOXL4Q96JB6 756 aa9.1□□□□□ -0.95
PDE4D-201ENST00000309641 COQ10AQ96MF6 247 aa9.1□□□□□ -0.95
PDE4D-201ENST00000309641 LYSMD1Q96S90 227 aa9.1□□□□□ -0.95
PDE4D-201ENST00000309641 PAK5Q9P286 719 aa9.1□□□□□ -0.95
PDE4D-201ENST00000309641 NCDNQ9UBB6 729 aa9.1□□□□□ -0.95
PDE4D-201ENST00000309641 RPL26L1Q9UNX3 145 aaKnown RBP9.1□□□□□ -0.95
PDE4D-201ENST00000309641 AAR2Q9Y312 384 aaKnown RBP9.1□□□□□ -0.95
PDE4D-201ENST00000309641 GOLGA6L10A0A0M3HER8 536 aa9.1□□□□□ -0.95
PDE4D-201ENST00000309641 A0A1B0GVT2 93 aa9.1□□□□□ -0.95
PDE4D-201ENST00000309641 A0A1W2PR77 199 aa9.1□□□□□ -0.95
PDE4D-201ENST00000309641 LZTS3O60299 673 aaPredicted RBP9.1□□□□□ -0.95
PDE4D-201ENST00000309641 AP2A1O95782 977 aa9.1□□□□□ -0.95
PDE4D-201ENST00000309641 EPOP01588 193 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms