RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 ESPNB1AK53 854 aa17.94■□□□□ 0.46
SSSCA1-201ENST00000309328 LZTS3O60299 673 aaPredicted RBP17.94■□□□□ 0.46
SSSCA1-201ENST00000309328 MAGEC1O60732 1142 aa17.94■□□□□ 0.46
SSSCA1-201ENST00000309328 PPFIA2O75334 1257 aa17.94■□□□□ 0.46
SSSCA1-201ENST00000309328 PYGLP06737 847 aa17.94■□□□□ 0.46
SSSCA1-201ENST00000309328 APRTP07741 180 aa17.94■□□□□ 0.46
SSSCA1-201ENST00000309328 ATXN1LP0C7T5 689 aaKnown RBP17.94■□□□□ 0.46
SSSCA1-201ENST00000309328 C6P13671 934 aa17.94■□□□□ 0.46
SSSCA1-201ENST00000309328 TPSB2P20231 275 aa17.94■□□□□ 0.46
SSSCA1-201ENST00000309328 PTGER3P43115 390 aa17.94■□□□□ 0.46
SSSCA1-201ENST00000309328 MAGEA6P43360 314 aa17.94■□□□□ 0.46
SSSCA1-201ENST00000309328 PPP2CBP62714 309 aa17.94■□□□□ 0.46
SSSCA1-201ENST00000309328 RACK1P63244 317 aaKnown RBP17.94■□□□□ 0.46
SSSCA1-201ENST00000309328 PPP2CAP67775 309 aa17.94■□□□□ 0.46
SSSCA1-201ENST00000309328 RALGDSQ12967 914 aa17.94■□□□□ 0.46
SSSCA1-201ENST00000309328 GPS1Q13098 491 aa17.94■□□□□ 0.46
SSSCA1-201ENST00000309328 PTK6Q13882 451 aa17.94■□□□□ 0.46
SSSCA1-201ENST00000309328 GALNT3Q14435 633 aa17.94■□□□□ 0.46
SSSCA1-201ENST00000309328 TPSAB1Q15661 275 aa17.94■□□□□ 0.46
SSSCA1-201ENST00000309328 SIRPB2Q5JXA9 342 aa17.94■□□□□ 0.46
SSSCA1-201ENST00000309328 LIPIQ6XZB0 460 aa17.94■□□□□ 0.46
SSSCA1-201ENST00000309328 NRSN1Q8IZ57 195 aa17.94■□□□□ 0.46
SSSCA1-201ENST00000309328 PDCD7Q8N8D1 485 aaKnown RBP17.94■□□□□ 0.46
SSSCA1-201ENST00000309328 SUMF1Q8NBK3 374 aa17.94■□□□□ 0.46
SSSCA1-201ENST00000309328 PILRBQ9UKJ0 227 aa17.94■□□□□ 0.46
SSSCA1-201ENST00000309328 ZFR2Q9UPR6 939 aaKnown RBP17.94■□□□□ 0.46
SSSCA1-201ENST00000309328 ITM2BQ9Y287 266 aa17.94■□□□□ 0.46
SSSCA1-201ENST00000309328 C1orf232A0A0U1RR37 186 aa17.93■□□□□ 0.46
SSSCA1-201ENST00000309328 FAM187AA6NFU0 413 aa17.93■□□□□ 0.46
SSSCA1-201ENST00000309328 IGLON5A6NGN9 336 aa17.93■□□□□ 0.46
SSSCA1-201ENST00000309328 ETS1P14921 441 aa17.93■□□□□ 0.46
SSSCA1-201ENST00000309328 CTPS1P17812 591 aa17.93■□□□□ 0.46
SSSCA1-201ENST00000309328 DEKP35659 375 aaKnown RBP17.93■□□□□ 0.46
SSSCA1-201ENST00000309328 AFF3P51826 1226 aaKnown RBP17.93■□□□□ 0.46
SSSCA1-201ENST00000309328 NHLH1Q02575 133 aa17.93■□□□□ 0.46
SSSCA1-201ENST00000309328 CDH17Q12864 832 aa17.93■□□□□ 0.46
SSSCA1-201ENST00000309328 TEAD4Q15561 434 aa17.93■□□□□ 0.46
SSSCA1-201ENST00000309328 CNGA3Q16281 694 aa17.93■□□□□ 0.46
SSSCA1-201ENST00000309328 LRRC73Q5JTD7 316 aa17.93■□□□□ 0.46
SSSCA1-201ENST00000309328 SEL1L3Q68CR1 1132 aa17.93■□□□□ 0.46
SSSCA1-201ENST00000309328 LRRC66Q68CR7 880 aa17.93■□□□□ 0.46
SSSCA1-201ENST00000309328 ZNF765Q7L2R6 523 aa17.93■□□□□ 0.46
SSSCA1-201ENST00000309328 KDELC2Q7Z4H8 507 aa17.93■□□□□ 0.46
SSSCA1-201ENST00000309328 IQCHQ86VS3 1027 aa17.93■□□□□ 0.46
SSSCA1-201ENST00000309328 NLRP8Q86W28 1048 aa17.93■□□□□ 0.46
SSSCA1-201ENST00000309328 KLHL7Q8IXQ5 586 aa17.93■□□□□ 0.46
SSSCA1-201ENST00000309328 CEP112Q8N8E3 955 aa17.93■□□□□ 0.46
SSSCA1-201ENST00000309328 GLIS1Q8NBF1 620 aa17.93■□□□□ 0.46
SSSCA1-201ENST00000309328 WRAP53Q9BUR4 548 aaKnown RBP17.93■□□□□ 0.46
SSSCA1-201ENST00000309328 ZFYVE1Q9HBF4 777 aa17.93■□□□□ 0.46
SSSCA1-201ENST00000309328 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.93■□□□□ 0.46
SSSCA1-201ENST00000309328 PKD2L2Q9NZM6 624 aa17.93■□□□□ 0.46
SSSCA1-201ENST00000309328 ASIC3Q9UHC3 531 aa17.93■□□□□ 0.46
SSSCA1-201ENST00000309328 HS3ST3A1Q9Y663 406 aa17.93■□□□□ 0.46
SSSCA1-201ENST00000309328 VPS13AQ96RL7 3174 aa17.93■□□□□ 0.46
SSSCA1-201ENST00000309328 A0A1B0GTW7 788 aa17.92■□□□□ 0.46
SSSCA1-201ENST00000309328 F5H423 210 aaPredicted RBP17.92■□□□□ 0.46
SSSCA1-201ENST00000309328 WNT9AO14904 365 aa17.92■□□□□ 0.46
SSSCA1-201ENST00000309328 BCAT2O15382 392 aaPredicted RBP17.92■□□□□ 0.46
SSSCA1-201ENST00000309328 MMP20O60882 483 aa17.92■□□□□ 0.46
SSSCA1-201ENST00000309328 CRTAMO95727 393 aa17.92■□□□□ 0.46
SSSCA1-201ENST00000309328 ZSCAN5DPP0CG00 497 aa17.92■□□□□ 0.46
SSSCA1-201ENST00000309328 HMGCLP35914 325 aa17.92■□□□□ 0.46
SSSCA1-201ENST00000309328 STC1P52823 247 aa17.92■□□□□ 0.46
SSSCA1-201ENST00000309328 STAT4Q14765 748 aa17.92■□□□□ 0.46
SSSCA1-201ENST00000309328 DUOXA1Q1HG43 343 aa17.92■□□□□ 0.46
SSSCA1-201ENST00000309328 FAXCQ5TGI0 409 aa17.92■□□□□ 0.46
SSSCA1-201ENST00000309328 CRTC1Q6UUV9 634 aa17.92■□□□□ 0.46
SSSCA1-201ENST00000309328 PPP1R21Q6ZMI0 780 aa17.92■□□□□ 0.46
SSSCA1-201ENST00000309328 CBARPQ8N350 705 aaPredicted RBP17.92■□□□□ 0.46
SSSCA1-201ENST00000309328 SERAC1Q96JX3 654 aa17.92■□□□□ 0.46
SSSCA1-201ENST00000309328 KRT12Q99456 494 aa17.92■□□□□ 0.46
SSSCA1-201ENST00000309328 FRMD8Q9BZ67 464 aaPredicted RBP17.92■□□□□ 0.46
SSSCA1-201ENST00000309328 GPR63Q9BZJ6 419 aa17.92■□□□□ 0.46
SSSCA1-201ENST00000309328 EIF2B4Q9UI10 523 aaKnown RBP17.92■□□□□ 0.46
SSSCA1-201ENST00000309328 GGT7Q9UJ14 662 aa17.92■□□□□ 0.46
SSSCA1-201ENST00000309328 FANCMQ8IYD8 2048 aa17.92■□□□□ 0.46
SSSCA1-201ENST00000309328 CTAGE15A4D2H0 777 aa17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 C2orf81A6NN90 581 aa17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 FPGTO14772 594 aa17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 RECQL5O94762 991 aaPredicted RBP17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 AGTP01019 485 aa17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 PRKCGP05129 697 aa17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 ALPIP09923 528 aa17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 CTAGE8P0CG41 777 aa17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 LHCGRP22888 699 aa17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 ITPKAP23677 461 aa17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 MAT2AP31153 395 aaKnown RBP17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 ADCY8P40145 1251 aa17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 DCDC1P59894 354 aa17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 LRRC14Q15048 493 aa17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 ACOX1Q15067 660 aa17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 ARMCX6Q7L4S7 300 aa17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 GLT6D1Q7Z4J2 308 aa17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 CTAGE6Q86UF2 777 aa17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 HOOK3Q86VS8 718 aa17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 JAMLQ86YT9 394 aa17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 DCP2Q8IU60 420 aaKnown RBP17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 CTAGE4Q8IX94 777 aa17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 SLC25A41Q8N5S1 370 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms