RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 MFHAS1Q9Y4C4 1052 aa11.87□□□□□ -0.51
SMIM4-201ENST00000307106 MAP4K5Q9Y4K4 846 aa11.87□□□□□ -0.51
SMIM4-201ENST00000307106 F8P00451 2351 aa11.87□□□□□ -0.51
SMIM4-201ENST00000307106 MED13LQ71F56 2210 aa11.87□□□□□ -0.51
SMIM4-201ENST00000307106 DIDO1Q9BTC0 2240 aaKnown RBP11.87□□□□□ -0.51
SMIM4-201ENST00000307106 PRRC2CQ9Y520 2896 aaKnown RBP11.86□□□□□ -0.51
SMIM4-201ENST00000307106 A8MU76 341 aa11.86□□□□□ -0.51
SMIM4-201ENST00000307106 PPM1DO15297 605 aa11.86□□□□□ -0.51
SMIM4-201ENST00000307106 INSIG1O15503 277 aa11.86□□□□□ -0.51
SMIM4-201ENST00000307106 PIGNO95427 931 aa11.86□□□□□ -0.51
SMIM4-201ENST00000307106 FURINP09958 794 aa11.86□□□□□ -0.51
SMIM4-201ENST00000307106 F8A1P23610 371 aa11.86□□□□□ -0.51
SMIM4-201ENST00000307106 STAT1P42224 750 aa11.86□□□□□ -0.51
SMIM4-201ENST00000307106 NOP2P46087 812 aaKnown RBP11.86□□□□□ -0.51
SMIM4-201ENST00000307106 PPM1FP49593 454 aaPredicted RBP11.86□□□□□ -0.51
SMIM4-201ENST00000307106 SNX16P57768 344 aa11.86□□□□□ -0.51
SMIM4-201ENST00000307106 LRRC63Q05C16 580 aa11.86□□□□□ -0.51
SMIM4-201ENST00000307106 MRPL49Q13405 166 aaKnown RBP11.86□□□□□ -0.51
SMIM4-201ENST00000307106 UGP2Q16851 508 aa11.86□□□□□ -0.51
SMIM4-201ENST00000307106 CCDC40Q4G0X9 1142 aa11.86□□□□□ -0.51
SMIM4-201ENST00000307106 PTPN20Q4JDL3 420 aa11.86□□□□□ -0.51
SMIM4-201ENST00000307106 SNAP47Q5SQN1 464 aa11.86□□□□□ -0.51
SMIM4-201ENST00000307106 ERAP2Q6P179 960 aa11.86□□□□□ -0.51
SMIM4-201ENST00000307106 NRROSQ86YC3 692 aa11.86□□□□□ -0.51
SMIM4-201ENST00000307106 NAGSQ8N159 534 aa11.86□□□□□ -0.51
SMIM4-201ENST00000307106 ESX1Q8N693 406 aa11.86□□□□□ -0.51
SMIM4-201ENST00000307106 NETO2Q8NC67 525 aa11.86□□□□□ -0.51
SMIM4-201ENST00000307106 C1orf131Q8NDD1 294 aaKnown RBP11.86□□□□□ -0.51
SMIM4-201ENST00000307106 PRR7Q8TB68 274 aa11.86□□□□□ -0.51
SMIM4-201ENST00000307106 NCAPGQ9BPX3 1015 aa11.86□□□□□ -0.51
SMIM4-201ENST00000307106 LGR4Q9BXB1 951 aa11.86□□□□□ -0.51
SMIM4-201ENST00000307106 CARS2Q9HA77 564 aaKnown RBP11.86□□□□□ -0.51
SMIM4-201ENST00000307106 APMAPQ9HDC9 416 aa11.86□□□□□ -0.51
SMIM4-201ENST00000307106 DONSONQ9NYP3 566 aa11.86□□□□□ -0.51
SMIM4-201ENST00000307106 TAAR2Q9P1P5 351 aa11.86□□□□□ -0.51
SMIM4-201ENST00000307106 OAS3Q9Y6K5 1087 aaKnown RBP11.86□□□□□ -0.51
SMIM4-201ENST00000307106 RPS6KL1Q9Y6S9 549 aa11.86□□□□□ -0.51
SMIM4-201ENST00000307106 CROCCQ5TZA2 2017 aa11.86□□□□□ -0.51
SMIM4-201ENST00000307106 FAM237AA0A1B0GTK4 181 aa11.85□□□□□ -0.51
SMIM4-201ENST00000307106 TSPAN11A1L157 253 aa11.85□□□□□ -0.51
SMIM4-201ENST00000307106 WIPF3A6NGB9 483 aa11.85□□□□□ -0.51
SMIM4-201ENST00000307106 TCP11X1B4DZS4 312 aa11.85□□□□□ -0.51
SMIM4-201ENST00000307106 BUB1O43683 1085 aa11.85□□□□□ -0.51
SMIM4-201ENST00000307106 DLGAP3O95886 979 aa11.85□□□□□ -0.51
SMIM4-201ENST00000307106 HOXC4P09017 264 aaPredicted RBP11.85□□□□□ -0.51
SMIM4-201ENST00000307106 AK4P27144 223 aaPredicted RBP11.85□□□□□ -0.51
SMIM4-201ENST00000307106 DLSTP36957 453 aa11.85□□□□□ -0.51
SMIM4-201ENST00000307106 MMP12P39900 470 aa11.85□□□□□ -0.51
SMIM4-201ENST00000307106 MAPKAPK2P49137 400 aa11.85□□□□□ -0.51
SMIM4-201ENST00000307106 PMS2P54278 862 aa11.85□□□□□ -0.51
SMIM4-201ENST00000307106 RHOAP61586 193 aa11.85□□□□□ -0.51
SMIM4-201ENST00000307106 GPLD1P80108 840 aa11.85□□□□□ -0.51
SMIM4-201ENST00000307106 ILF3Q12906 894 aaKnown RBP eCLIP11.85□□□□□ -0.51
SMIM4-201ENST00000307106 MAP7Q14244 749 aa11.85□□□□□ -0.51
SMIM4-201ENST00000307106 SLC25A52Q3SY17 297 aa11.85□□□□□ -0.51
SMIM4-201ENST00000307106 NADK2Q4G0N4 442 aa11.85□□□□□ -0.51
SMIM4-201ENST00000307106 SLC30A9Q6PML9 568 aa11.85□□□□□ -0.51
SMIM4-201ENST00000307106 ZNF354CQ86Y25 554 aa11.85□□□□□ -0.51
SMIM4-201ENST00000307106 ZDHHC17Q8IUH5 632 aa11.85□□□□□ -0.51
SMIM4-201ENST00000307106 HCAR2Q8TDS4 363 aa11.85□□□□□ -0.51
SMIM4-201ENST00000307106 EXOC2Q96KP1 924 aa11.85□□□□□ -0.51
SMIM4-201ENST00000307106 MAGEH1Q9H213 219 aa11.85□□□□□ -0.51
SMIM4-201ENST00000307106 WDR26Q9H7D7 661 aa11.85□□□□□ -0.51
SMIM4-201ENST00000307106 FBXO8Q9NRD0 319 aa11.85□□□□□ -0.51
SMIM4-201ENST00000307106 TMEM51Q9NW97 253 aa11.85□□□□□ -0.51
SMIM4-201ENST00000307106 PDP2Q9P2J9 529 aa11.85□□□□□ -0.51
SMIM4-201ENST00000307106 ERRFI1Q9UJM3 462 aaPredicted RBP11.85□□□□□ -0.51
SMIM4-201ENST00000307106 PCDHGC3Q9UN70 934 aa11.85□□□□□ -0.51
SMIM4-201ENST00000307106 MDC1Q14676 2089 aaKnown RBP11.84□□□□□ -0.51
SMIM4-201ENST00000307106 ZSCAN5CA6NGD5 496 aaPredicted RBP11.84□□□□□ -0.51
SMIM4-201ENST00000307106 BECN2A8MW95 431 aa11.84□□□□□ -0.51
SMIM4-201ENST00000307106 PDE2AO00408 941 aaPredicted RBP11.84□□□□□ -0.51
SMIM4-201ENST00000307106 TEX33O43247 280 aa11.84□□□□□ -0.51
SMIM4-201ENST00000307106 KDELR3O43731 214 aa11.84□□□□□ -0.51
SMIM4-201ENST00000307106 RAMP2O60895 175 aa11.84□□□□□ -0.51
SMIM4-201ENST00000307106 DNAJB5O75953 348 aa11.84□□□□□ -0.51
SMIM4-201ENST00000307106 RECQL5O94762 991 aaPredicted RBP11.84□□□□□ -0.51
SMIM4-201ENST00000307106 SORBS2O94875 1100 aaKnown RBP11.84□□□□□ -0.51
SMIM4-201ENST00000307106 LDLRP01130 860 aa11.84□□□□□ -0.51
SMIM4-201ENST00000307106 TRIM23P36406 574 aa11.84□□□□□ -0.51
SMIM4-201ENST00000307106 USP8P40818 1118 aa11.84□□□□□ -0.51
SMIM4-201ENST00000307106 RAPGEF1Q13905 1077 aa11.84□□□□□ -0.51
SMIM4-201ENST00000307106 COBLL1Q53SF7 1204 aa11.84□□□□□ -0.51
SMIM4-201ENST00000307106 CFAP58Q5T655 872 aa11.84□□□□□ -0.51
SMIM4-201ENST00000307106 ZNF658Q5TYW1 1059 aaPredicted RBP11.84□□□□□ -0.51
SMIM4-201ENST00000307106 RWDD4Q6NW29 188 aaKnown RBP11.84□□□□□ -0.51
SMIM4-201ENST00000307106 TMEM135Q86UB9 458 aa11.84□□□□□ -0.51
SMIM4-201ENST00000307106 NLRP14Q86W24 1093 aa11.84□□□□□ -0.51
SMIM4-201ENST00000307106 FAM131BQ86XD5 332 aa11.84□□□□□ -0.51
SMIM4-201ENST00000307106 CASKIN2Q8WXE0 1202 aa11.84□□□□□ -0.51
SMIM4-201ENST00000307106 MOCOSQ96EN8 888 aa11.84□□□□□ -0.51
SMIM4-201ENST00000307106 TCTN2Q96GX1 697 aa11.84□□□□□ -0.51
SMIM4-201ENST00000307106 AHCYL2Q96HN2 611 aaKnown RBP11.84□□□□□ -0.51
SMIM4-201ENST00000307106 SUV39H2Q9H5I1 410 aa11.84□□□□□ -0.51
SMIM4-201ENST00000307106 TMEM248Q9NWD8 314 aa11.84□□□□□ -0.51
SMIM4-201ENST00000307106 RMND1Q9NWS8 449 aa11.84□□□□□ -0.51
SMIM4-201ENST00000307106 TRNAU1APQ9NX07 287 aaKnown RBP11.84□□□□□ -0.51
SMIM4-201ENST00000307106 ATP8A1Q9Y2Q0 1164 aa11.84□□□□□ -0.51
SMIM4-201ENST00000307106 OTOGQ6ZRI0 2925 aa11.84□□□□□ -0.51
SMIM4-201ENST00000307106 ITPR3Q14573 2671 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms