RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 SEC13P55735 322 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.66□□□□□ -0.38
USP38-201ENST00000307017 PEG10Q86TG7 708 aaKnown RBP12.66□□□□□ -0.38
USP38-201ENST00000307017 CCDC120Q96HB5 630 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 RFX7Q2KHR2 1363 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 STX16-NPEPL1H3BU86 382 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 STX16O14662 325 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 PRKG2Q13237 762 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 SP140Q13342 867 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 PLEKHG4Q58EX7 1191 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 PIK3R6Q5UE93 754 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 IRAK1BP1Q5VVH5 260 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 MOXD1Q6UVY6 613 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 PSTKQ8IV42 348 aaKnown RBP12.66□□□□□ -0.38
USP38-201ENST00000307017 PRSS58Q8IYP2 241 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 BRD9Q9H8M2 597 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 ANKRD6Q9Y2G4 727 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 NTSP30990 170 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 COL9A3Q14050 684 aaPredicted RBP12.66□□□□□ -0.38
USP38-201ENST00000307017 GANABQ14697 944 aaKnown RBP12.66□□□□□ -0.38
USP38-201ENST00000307017 MFSD10Q14728 455 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 SAMD3Q8N6K7 520 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 C11orf24Q96F05 449 aaPredicted RBP12.66□□□□□ -0.38
USP38-201ENST00000307017 LRMDAQ9H2I8 198 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 SSR3Q9UNL2 185 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 ERGIC3Q9Y282 383 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 PCDHB5Q9Y5E4 795 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 LRRIQ1Q96JM4 1722 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 PDHXO00330 501 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 RFXANKO14593 260 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 MPP1Q00013 466 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 OTOP1Q7RTM1 612 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 PLEKHH3Q7Z736 793 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 CADM2Q8N3J6 435 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 ZNF563Q8TA94 476 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 TEX47Q8TBZ9 253 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 TSEN15Q8WW01 171 aaKnown RBP12.66□□□□□ -0.38
USP38-201ENST00000307017 PHF24Q9UPV7 400 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 A0A0J9YYE9 177 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 ANXA6P08133 673 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 CYP3A4P08684 503 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 CETPP11597 493 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 UGT2B15P54855 530 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 TXNL4AP83876 142 aaKnown RBP12.66□□□□□ -0.38
USP38-201ENST00000307017 TNK2Q07912 1038 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 SQLEQ14534 574 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 PTPRNQ16849 979 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 CHST13Q8NET6 341 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 COX4I2Q96KJ9 171 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 FGFBP2Q9BYJ0 223 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 BRINP2Q9C0B6 783 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 C3orf18Q9UK00 162 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 STARD13Q9Y3M8 1113 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 ZNF536O15090 1300 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 ERBB2P04626 1255 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 ZFP69Q49AA0 526 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 STXBP5Q5T5C0 1151 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 TMPRSS11BQ86T26 416 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 YIPF4Q9BSR8 244 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 RTFDC1Q9BY42 306 aaPredicted RBP12.66□□□□□ -0.38
USP38-201ENST00000307017 KCNK4Q9NYG8 393 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 IKZF2Q9UKS7 526 aa12.66□□□□□ -0.38
USP38-201ENST00000307017 HAT1O14929 419 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 PRKAR1AP10644 381 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 MC4RP32245 332 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 TOP3AQ13472 1001 aaPredicted RBP12.65□□□□□ -0.38
USP38-201ENST00000307017 FAM187BQ17R55 369 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 UAP1L1Q3KQV9 507 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 TIGD2Q4W5G0 525 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 MEIOBQ8N635 442 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 PIWIL2Q8TC59 973 aaKnown RBP12.65□□□□□ -0.38
USP38-201ENST00000307017 MORF4L1Q9UBU8 362 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 ZNF490Q9ULM2 529 aaPredicted RBP12.65□□□□□ -0.38
USP38-201ENST00000307017 VPS4AQ9UN37 437 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 ING4Q9UNL4 249 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 DDNO94850 711 aaPredicted RBP12.65□□□□□ -0.38
USP38-201ENST00000307017 CSH1P0DML2 217 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 CSH2P0DML3 217 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 ALADP13716 330 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 ALAS2P22557 587 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 ADORA2AP29274 412 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 MAZP56270 477 aaKnown RBP12.65□□□□□ -0.38
USP38-201ENST00000307017 DEFA5Q01523 94 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 MAD2L1Q13257 205 aaPredicted RBP12.65□□□□□ -0.38
USP38-201ENST00000307017 GRIK5Q16478 980 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 HELQQ8TDG4 1101 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 MYLPFQ96A32 169 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 POLE4Q9NR33 117 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 AHSPQ9NZD4 102 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 ITGA11Q9UKX5 1188 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 TNS3Q68CZ2 1445 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 UBE2QL1A1L167 161 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 RGSL1A5PLK6 1076 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 CD48P09326 243 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 SLC15A2Q16348 729 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 SLC9A4Q6AI14 798 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 NEPROQ6NW34 567 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 TCAIMQ8N3R3 496 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 ALLCQ8N6M5 410 aa12.65□□□□□ -0.38
USP38-201ENST00000307017 TRPV3Q8NET8 790 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms