RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 SNX19Q92543 992 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 NDRG1Q92597 394 aaKnown RBP5.47□□□□□ -1.53
VPS50-202ENST00000305866 COPS5Q92905 334 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 ITPKCQ96DU7 683 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 ELMO2Q96JJ3 720 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 TNIP3Q96KP6 325 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 OMDQ99983 421 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 RTP3Q9BQQ7 232 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 C1QTNF3Q9BXJ4 246 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 ABHD16BQ9H3Z7 469 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 NOL6Q9H6R4 1146 aaKnown RBP5.47□□□□□ -1.53
VPS50-202ENST00000305866 LRRC40Q9H9A6 602 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 PLGRKTQ9HBL7 147 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 SETD4Q9NVD3 440 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 USP22Q9UPT9 525 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 CLEC11AQ9Y240 323 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 MROH6A6NGR9 719 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 TMEM229AB2RXF0 380 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 TMEM189-UBE2V1I3L0A0 370 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 K7EPI3 171 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 PSMD12O00232 456 aaPredicted RBP5.47□□□□□ -1.53
VPS50-202ENST00000305866 TIMM44O43615 452 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 SNAP91O60641 907 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 EFEMP2O95967 443 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 F9P00740 461 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 FGF4P08620 206 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 IL12AP29459 219 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 ABCG1P45844 678 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 GP2P55259 537 aaKnown RBP5.47□□□□□ -1.53
VPS50-202ENST00000305866 LILRA4P59901 499 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 PSME3P61289 254 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 IRX4P78413 519 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 FLOT2Q14254 428 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 GBX1Q14549 363 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 PSMD5Q16401 504 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 DGKDQ16760 1214 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 BTBD8Q5XKL5 378 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 KANK2Q63ZY3 851 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 OGFOD2Q6N063 350 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 MSANTD2Q6P1R3 559 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 GPRIN1Q7Z2K8 1008 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 TFAP2DQ7Z6R9 452 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 RBM23Q86U06 439 aaKnown RBP5.47□□□□□ -1.53
VPS50-202ENST00000305866 CDR2LQ86X02 465 aaPredicted RBP5.47□□□□□ -1.53
VPS50-202ENST00000305866 CROCCP3Q8IVE0 287 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 B3GALNT2Q8NCR0 500 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.47□□□□□ -1.53
VPS50-202ENST00000305866 CANT1Q8WVQ1 401 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 VMP1Q96GC9 406 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 PDLIM5Q96HC4 596 aaKnown RBP5.47□□□□□ -1.53
VPS50-202ENST00000305866 CPB2Q96IY4 423 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 PLEKHA8Q96JA3 519 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 TEKT5Q96M29 485 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 SLC30A3Q99726 388 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 TRIM62Q9BVG3 475 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 NUF2Q9BZD4 464 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 POPDC3Q9HBV1 291 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 LTB4R2Q9NPC1 389 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 COMMD8Q9NX08 183 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 AP4S1Q9Y587 144 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 LAMA3Q16787 3333 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 A0A0U1RQS6 177 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 INO80B-WBP1J3KQ70 363 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 NOP56O00567 594 aaKnown RBP5.47□□□□□ -1.53
VPS50-202ENST00000305866 PPP6CO00743 305 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 XPOTO43592 962 aaKnown RBP5.47□□□□□ -1.53
VPS50-202ENST00000305866 ATP6V1B1P15313 513 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 DESP17661 470 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 GARSP41250 739 aaKnown RBP5.47□□□□□ -1.53
VPS50-202ENST00000305866 HLCSP50747 726 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 SOX4Q06945 474 aaPredicted RBP5.47□□□□□ -1.53
VPS50-202ENST00000305866 RALGDSQ12967 914 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 CNGA3Q16281 694 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 NRF1Q16656 503 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 FAM110CQ1W6H9 321 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 PDCD4Q53EL6 469 aaKnown RBP5.47□□□□□ -1.53
VPS50-202ENST00000305866 COQ5Q5HYK3 327 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 VARS2Q5ST30 1063 aaKnown RBP5.47□□□□□ -1.53
VPS50-202ENST00000305866 OR6B2Q6IFH4 312 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 ZNF549Q6P9A3 640 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 TRIM67Q6ZTA4 783 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 SETD3Q86TU7 594 aaPredicted RBP5.47□□□□□ -1.53
VPS50-202ENST00000305866 ITIH5Q86UX2 942 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 IGFN1Q86VF2 1251 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 CENPSQ8N2Z9 138 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 CHCHD4Q8N4Q1 142 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 RNF148Q8N7C7 305 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 CATSPER1Q8NEC5 780 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 OR9I1Q8NGQ6 314 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 TRUB1Q8WWH5 349 aaKnown RBP5.47□□□□□ -1.53
VPS50-202ENST00000305866 KIF12Q96FN5 646 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 FBXL20Q96IG2 436 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 CIB1Q99828 191 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 EIF2AQ9BY44 585 aaKnown RBP5.47□□□□□ -1.53
VPS50-202ENST00000305866 NXF2Q9GZY0 626 aaKnown RBP5.47□□□□□ -1.53
VPS50-202ENST00000305866 PRDM12Q9H4Q4 367 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 NOL11Q9H8H0 719 aaKnown RBP5.47□□□□□ -1.53
VPS50-202ENST00000305866 CLK4Q9HAZ1 481 aaKnown RBP5.47□□□□□ -1.53
VPS50-202ENST00000305866 MID2Q9UJV3 735 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 CDH9Q9ULB4 789 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms