RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 ARNTP27540 789 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 NPY2RP49146 381 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 LMAN1P49257 510 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 ADPRHP54922 357 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 SESN2P58004 480 aaPredicted RBP9.51□□□□□ -0.89
RFX3-201ENST00000302303 POLR2LP62875 67 aaKnown RBP9.51□□□□□ -0.89
RFX3-201ENST00000302303 CREB5Q02930 508 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 CALCOCO2Q13137 446 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 CUL1Q13616 776 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 POU6F1Q14863 301 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 CNGA3Q16281 694 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 CCDC38Q502W7 563 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 DENND2CQ68D51 928 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 FBXL19Q6PCT2 694 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 KIAA1324Q6UXG2 1013 aaKnown RBP9.51□□□□□ -0.89
RFX3-201ENST00000302303 LYSMD3Q7Z3D4 306 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 HSD11B1LQ7Z5J1 315 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 TECPR1Q7Z6L1 1165 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 TMEM135Q86UB9 458 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 IFT20Q8IY31 132 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 GPR161Q8N6U8 529 aaKnown RBP9.51□□□□□ -0.89
RFX3-201ENST00000302303 MYRIPQ8NFW9 859 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 RAB7BQ96AH8 199 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 PPP1R16AQ96I34 528 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 FCRL3Q96P31 734 aaPredicted RBP9.51□□□□□ -0.89
RFX3-201ENST00000302303 RANBP9Q96S59 729 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 KIFC1Q9BW19 673 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 EBF2Q9HAK2 575 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 XAB2Q9HCS7 855 aaKnown RBP9.51□□□□□ -0.89
RFX3-201ENST00000302303 CHRAC1Q9NRG0 131 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 SPATA6Q9NWH7 488 aaPredicted RBP9.51□□□□□ -0.89
RFX3-201ENST00000302303 GOLGA6AQ9NYA3 693 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 WSB2Q9NYS7 404 aaPredicted RBP9.51□□□□□ -0.89
RFX3-201ENST00000302303 IL17CQ9P0M4 197 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 SLC2A6Q9UGQ3 507 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 MBD1Q9UIS9 605 aaPredicted RBP9.51□□□□□ -0.89
RFX3-201ENST00000302303 ZNF711Q9Y462 761 aa9.51□□□□□ -0.89
RFX3-201ENST00000302303 EML5Q05BV3 1969 aa9.5□□□□□ -0.89
RFX3-201ENST00000302303 ZCWPW2A0A1B0GU75 182 aa9.5□□□□□ -0.89
RFX3-201ENST00000302303 SLC7A4O43246 635 aa9.5□□□□□ -0.89
RFX3-201ENST00000302303 BUD23O43709 281 aaKnown RBP9.5□□□□□ -0.89
RFX3-201ENST00000302303 C1QAP02745 245 aa9.5□□□□□ -0.89
RFX3-201ENST00000302303 CA4P22748 312 aa9.5□□□□□ -0.89
RFX3-201ENST00000302303 VIPR1P32241 457 aa9.5□□□□□ -0.89
RFX3-201ENST00000302303 CA5AP35218 305 aa9.5□□□□□ -0.89
RFX3-201ENST00000302303 HMGCLP35914 325 aa9.5□□□□□ -0.89
RFX3-201ENST00000302303 SUOXP51687 545 aa9.5□□□□□ -0.89
RFX3-201ENST00000302303 ARSDP51689 593 aa9.5□□□□□ -0.89
RFX3-201ENST00000302303 ZNF140P52738 457 aaPredicted RBP9.5□□□□□ -0.89
RFX3-201ENST00000302303 STC1P52823 247 aa9.5□□□□□ -0.89
RFX3-201ENST00000302303 EPHB1P54762 984 aa9.5□□□□□ -0.89
RFX3-201ENST00000302303 FAM193AP78312 1265 aa9.5□□□□□ -0.89
RFX3-201ENST00000302303 CAV1Q03135 178 aa9.5□□□□□ -0.89
RFX3-201ENST00000302303 ACVR1Q04771 509 aa9.5□□□□□ -0.89
RFX3-201ENST00000302303 TAF1AQ15573 450 aaPredicted RBP9.5□□□□□ -0.89
RFX3-201ENST00000302303 ELF2Q15723 593 aa9.5□□□□□ -0.89
RFX3-201ENST00000302303 HIF1AQ16665 826 aa9.5□□□□□ -0.89
RFX3-201ENST00000302303 TMEM259Q4ZIN3 620 aa9.5□□□□□ -0.89
RFX3-201ENST00000302303 HP1BP3Q5SSJ5 553 aaPredicted RBP9.5□□□□□ -0.89
RFX3-201ENST00000302303 LRRC66Q68CR7 880 aa9.5□□□□□ -0.89
RFX3-201ENST00000302303 PPP1R21Q6ZMI0 780 aa9.5□□□□□ -0.89
RFX3-201ENST00000302303 RELL1Q8IUW5 271 aa9.5□□□□□ -0.89
RFX3-201ENST00000302303 PELI3Q8N2H9 469 aa9.5□□□□□ -0.89
RFX3-201ENST00000302303 DNAAF3Q8N9W5 541 aa9.5□□□□□ -0.89
RFX3-201ENST00000302303 OR13C4Q8NGS5 318 aa9.5□□□□□ -0.89
RFX3-201ENST00000302303 OR13J1Q8NGT2 312 aa9.5□□□□□ -0.89
RFX3-201ENST00000302303 BLOC1S5Q8TDH9 187 aa9.5□□□□□ -0.89
RFX3-201ENST00000302303 RUBCNQ92622 972 aa9.5□□□□□ -0.89
RFX3-201ENST00000302303 COQ10AQ96MF6 247 aa9.5□□□□□ -0.89
RFX3-201ENST00000302303 OMDQ99983 421 aa9.5□□□□□ -0.89
RFX3-201ENST00000302303 ORAI3Q9BRQ5 295 aa9.5□□□□□ -0.89
RFX3-201ENST00000302303 FAM129AQ9BZQ8 928 aa9.5□□□□□ -0.89
RFX3-201ENST00000302303 TREX1Q9NSU2 369 aa9.5□□□□□ -0.89
RFX3-201ENST00000302303 TCAF1Q9Y4C2 921 aa9.5□□□□□ -0.89
RFX3-201ENST00000302303 KMT2EQ8IZD2 1858 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 LRRK1Q38SD2 2015 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 CCDC163A0A0D9SF12 145 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 SDR42E2A6NKP2 422 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 MMP20O60882 483 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 BCKDHBP21953 392 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 ADRA1DP25100 572 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 NMBRP28336 390 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 ELK3P41970 407 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 ARCN1P48444 511 aaKnown RBP9.49□□□□□ -0.89
RFX3-201ENST00000302303 LIG3P49916 1009 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 GPX6P59796 221 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 PPP2CBP62714 309 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 PPP2CAP67775 309 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 XIAPP98170 497 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 PDIA2Q13087 525 aaKnown RBP9.49□□□□□ -0.89
RFX3-201ENST00000302303 AGERQ15109 404 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 ZNF284Q2VY69 593 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 PCID2Q5JVF3 399 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 SEL1L3Q68CR1 1132 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 ESRP1Q6NXG1 681 aaKnown RBP9.49□□□□□ -0.89
RFX3-201ENST00000302303 CES3Q6UWW8 571 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 Q6ZVL8 140 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 USP45Q70EL2 814 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 FAM124AQ86V42 546 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 KBTBD6Q86V97 674 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms