RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 NTAN1Q96AB6 310 aa13.58□□□□□ -0.24
CTTN-201ENST00000301843 LTB4R2Q9NPC1 389 aa13.58□□□□□ -0.24
CTTN-201ENST00000301843 RRN3Q9NYV6 651 aa13.58□□□□□ -0.24
CTTN-201ENST00000301843 RNF181Q9P0P0 153 aa13.58□□□□□ -0.24
CTTN-201ENST00000301843 MAP10Q9P2G4 905 aa13.58□□□□□ -0.24
CTTN-201ENST00000301843 SUCOQ9UBS9 1254 aaKnown RBP13.58□□□□□ -0.24
CTTN-201ENST00000301843 A0A0U1RQS6 177 aa13.58□□□□□ -0.24
CTTN-201ENST00000301843 PIP5K1BO14986 540 aa13.58□□□□□ -0.24
CTTN-201ENST00000301843 TSPAN3O60637 253 aa13.58□□□□□ -0.24
CTTN-201ENST00000301843 BAIAP3O94812 1187 aa13.58□□□□□ -0.24
CTTN-201ENST00000301843 C8BP07358 591 aa13.58□□□□□ -0.24
CTTN-201ENST00000301843 NR4A1P22736 598 aa13.58□□□□□ -0.24
CTTN-201ENST00000301843 SQLEQ14534 574 aa13.58□□□□□ -0.24
CTTN-201ENST00000301843 HERC3Q15034 1050 aa13.58□□□□□ -0.24
CTTN-201ENST00000301843 LINC00523Q86TU6 105 aa13.58□□□□□ -0.24
CTTN-201ENST00000301843 C2CD4AQ8NCU7 369 aaPredicted RBP13.58□□□□□ -0.24
CTTN-201ENST00000301843 MIPOL1Q8TD10 442 aa13.58□□□□□ -0.24
CTTN-201ENST00000301843 KCTD13Q8WZ19 329 aa13.58□□□□□ -0.24
CTTN-201ENST00000301843 DNAI2Q9GZS0 605 aa13.58□□□□□ -0.24
CTTN-201ENST00000301843 AAR2Q9Y312 384 aaKnown RBP13.58□□□□□ -0.24
CTTN-201ENST00000301843 PDE4DIPQ5VU43 2346 aa13.57□□□□□ -0.24
CTTN-201ENST00000301843 MYL3P08590 195 aa13.57□□□□□ -0.24
CTTN-201ENST00000301843 HOXD8P13378 290 aaPredicted RBP13.57□□□□□ -0.24
CTTN-201ENST00000301843 CD247P20963 164 aa13.57□□□□□ -0.24
CTTN-201ENST00000301843 PNPLA4P41247 253 aa13.57□□□□□ -0.24
CTTN-201ENST00000301843 PRKAA2P54646 552 aa13.57□□□□□ -0.24
CTTN-201ENST00000301843 OTUD3Q5T2D3 398 aaPredicted RBP13.57□□□□□ -0.24
CTTN-201ENST00000301843 ZNF467Q7Z7K2 595 aaPredicted RBP13.57□□□□□ -0.24
CTTN-201ENST00000301843 PTGR2Q8N8N7 351 aaPredicted RBP13.57□□□□□ -0.24
CTTN-201ENST00000301843 DDI1Q8WTU0 396 aa13.57□□□□□ -0.24
CTTN-201ENST00000301843 GTF3C2Q8WUA4 911 aaPredicted RBP13.57□□□□□ -0.24
CTTN-201ENST00000301843 DPF3Q92784 378 aa13.57□□□□□ -0.24
CTTN-201ENST00000301843 CASP10Q92851 521 aa13.57□□□□□ -0.24
CTTN-201ENST00000301843 C19orf60Q96EN9 201 aa13.57□□□□□ -0.24
CTTN-201ENST00000301843 TEX37Q96LM6 180 aa13.57□□□□□ -0.24
CTTN-201ENST00000301843 C1orf50Q9BV19 199 aa13.57□□□□□ -0.24
CTTN-201ENST00000301843 OSBPL11Q9BXB4 747 aa13.57□□□□□ -0.24
CTTN-201ENST00000301843 SEMA4BQ9NPR2 832 aaPredicted RBP13.57□□□□□ -0.24
CTTN-201ENST00000301843 CLEC11AQ9Y240 323 aa13.57□□□□□ -0.24
CTTN-201ENST00000301843 ACTL7AQ9Y615 435 aa13.57□□□□□ -0.24
CTTN-201ENST00000301843 HHLA1C9JL84 531 aa13.57□□□□□ -0.24
CTTN-201ENST00000301843 NPHS1O60500 1241 aa13.57□□□□□ -0.24
CTTN-201ENST00000301843 PENKP01210 267 aaPredicted RBP13.57□□□□□ -0.24
CTTN-201ENST00000301843 LTA4HP09960 611 aaKnown RBP13.57□□□□□ -0.24
CTTN-201ENST00000301843 SLC7A1P30825 629 aa13.57□□□□□ -0.24
CTTN-201ENST00000301843 CCR1P32246 355 aa13.57□□□□□ -0.24
CTTN-201ENST00000301843 SLC5A3P53794 718 aa13.57□□□□□ -0.24
CTTN-201ENST00000301843 SLC10A7Q0GE19 358 aa13.57□□□□□ -0.24
CTTN-201ENST00000301843 RFTN1Q14699 578 aaPredicted RBP13.57□□□□□ -0.24
CTTN-201ENST00000301843 TIGD5Q53EQ6 642 aa13.57□□□□□ -0.24
CTTN-201ENST00000301843 NHSL2Q5HYW2 709 aa13.57□□□□□ -0.24
CTTN-201ENST00000301843 KLC3Q6P597 504 aa13.57□□□□□ -0.24
CTTN-201ENST00000301843 LRRTM3Q86VH5 581 aa13.57□□□□□ -0.24
CTTN-201ENST00000301843 NPLOC4Q8TAT6 608 aa13.57□□□□□ -0.24
CTTN-201ENST00000301843 PBXIP1Q96AQ6 731 aa13.57□□□□□ -0.24
CTTN-201ENST00000301843 C12orf43Q96C57 262 aaKnown RBP13.57□□□□□ -0.24
CTTN-201ENST00000301843 TUBGCP3Q96CW5 907 aa13.57□□□□□ -0.24
CTTN-201ENST00000301843 CYP2S1Q96SQ9 504 aa13.57□□□□□ -0.24
CTTN-201ENST00000301843 CNGB3Q9NQW8 809 aa13.57□□□□□ -0.24
CTTN-201ENST00000301843 CD300AQ9UGN4 299 aa13.57□□□□□ -0.24
CTTN-201ENST00000301843 DNAJC15Q9Y5T4 150 aa13.57□□□□□ -0.24
CTTN-201ENST00000301843 MAGED1Q9Y5V3 778 aaPredicted RBP13.57□□□□□ -0.24
CTTN-201ENST00000301843 A0A1W2PPW3 197 aa13.56□□□□□ -0.24
CTTN-201ENST00000301843 DLGAP1O14490 977 aa13.56□□□□□ -0.24
CTTN-201ENST00000301843 EI24O14681 340 aa13.56□□□□□ -0.24
CTTN-201ENST00000301843 ATE1O95260 518 aa13.56□□□□□ -0.24
CTTN-201ENST00000301843 HMBSP08397 361 aa13.56□□□□□ -0.24
CTTN-201ENST00000301843 HAPLN1P10915 354 aaPredicted RBP13.56□□□□□ -0.24
CTTN-201ENST00000301843 HSPA13P48723 471 aa13.56□□□□□ -0.24
CTTN-201ENST00000301843 STX1BP61266 288 aa13.56□□□□□ -0.24
CTTN-201ENST00000301843 SCAPQ12770 1279 aa13.56□□□□□ -0.24
CTTN-201ENST00000301843 PPP1R8Q12972 351 aaKnown RBP13.56□□□□□ -0.24
CTTN-201ENST00000301843 DUSP28Q4G0W2 176 aa13.56□□□□□ -0.24
CTTN-201ENST00000301843 AGAP9Q5VTM2 703 aa13.56□□□□□ -0.24
CTTN-201ENST00000301843 TMEM26Q6ZUK4 368 aa13.56□□□□□ -0.24
CTTN-201ENST00000301843 CMTR2Q8IYT2 770 aaKnown RBP13.56□□□□□ -0.24
CTTN-201ENST00000301843 TOP6BLQ8N6T0 577 aa13.56□□□□□ -0.24
CTTN-201ENST00000301843 MAGEE2Q8TD90 523 aaPredicted RBP13.56□□□□□ -0.24
CTTN-201ENST00000301843 TBATAQ96M53 351 aa13.56□□□□□ -0.24
CTTN-201ENST00000301843 HAUS8Q9BT25 410 aa13.56□□□□□ -0.24
CTTN-201ENST00000301843 MEAF6Q9HAF1 191 aa13.56□□□□□ -0.24
CTTN-201ENST00000301843 TCRBV3S1A0A5B6 114 aa13.56□□□□□ -0.24
CTTN-201ENST00000301843 GABRDO14764 452 aa13.56□□□□□ -0.24
CTTN-201ENST00000301843 MTSS1O43312 755 aa13.56□□□□□ -0.24
CTTN-201ENST00000301843 HSPA1AP0DMV8 641 aaKnown RBP13.56□□□□□ -0.24
CTTN-201ENST00000301843 HSPA1BP0DMV9 641 aaKnown RBP13.56□□□□□ -0.24
CTTN-201ENST00000301843 PCNAP12004 261 aa13.56□□□□□ -0.24
CTTN-201ENST00000301843 PRDX3P30048 256 aaKnown RBP13.56□□□□□ -0.24
CTTN-201ENST00000301843 ARL1P40616 181 aaPredicted RBP13.56□□□□□ -0.24
CTTN-201ENST00000301843 CCR3P51677 355 aa13.56□□□□□ -0.24
CTTN-201ENST00000301843 RPL26P61254 145 aaKnown RBP13.56□□□□□ -0.24
CTTN-201ENST00000301843 TXNL4AP83876 142 aaKnown RBP13.56□□□□□ -0.24
CTTN-201ENST00000301843 RPS6KA2Q15349 733 aa13.56□□□□□ -0.24
CTTN-201ENST00000301843 AAK1Q2M2I8 961 aa13.56□□□□□ -0.24
CTTN-201ENST00000301843 BLOC1S5Q8TDH9 187 aa13.56□□□□□ -0.24
CTTN-201ENST00000301843 RANBP9Q96S59 729 aa13.56□□□□□ -0.24
CTTN-201ENST00000301843 SLC9A7Q96T83 725 aa13.56□□□□□ -0.24
CTTN-201ENST00000301843 UPF3AQ9H1J1 476 aaKnown RBP13.56□□□□□ -0.24
CTTN-201ENST00000301843 PNPLA3Q9NST1 481 aa13.56□□□□□ -0.24
CTTN-201ENST00000301843 TREX1Q9NSU2 369 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms