RNA–Protein interactions for RNA: ENST00000301071.11

TUBA1A-202, Transcript of tubulin alpha 1a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA1A, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1A-202ENST00000301071 PTPN20Q4JDL3 420 aa9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 SLX4IPQ5VYV7 408 aa9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 TMEM214Q6NUQ4 689 aaKnown RBP9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 CASC4Q6P4E1 433 aa9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 SPRED1Q7Z699 444 aa9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 TFAP2DQ7Z6R9 452 aa9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 RTN4RL1Q86UN2 441 aaPredicted RBP9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 XYLT1Q86Y38 959 aa9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 WDR49Q8IV35 697 aa9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 BRSK2Q8IWQ3 736 aa9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 ZC3H7AQ8IWR0 971 aaKnown RBP9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 CADM3Q8N126 398 aa9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 RNF148Q8N7C7 305 aa9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 SMG8Q8ND04 991 aaKnown RBP9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 DBF4BQ8NFT6 615 aa9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 LINC01599Q8WXQ3 324 aa9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 TANKQ92844 425 aa9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 VWCEQ96DN2 955 aa9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 MCRS1Q96EZ8 462 aa9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 SH3YL1Q96HL8 342 aaPredicted RBP9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 RBBP8Q99708 897 aa9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 SPOCK3Q9BQ16 436 aa9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 ZNF670Q9BS34 389 aa9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 SLC25A23Q9BV35 468 aa9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 GATA5Q9BWX5 397 aaPredicted RBP9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 MRPL46Q9H2W6 279 aaKnown RBP9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 SNX25Q9H3E2 840 aa9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 NXF3Q9H4D5 531 aaKnown RBP9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 LRRC4Q9HBW1 653 aa9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 CPNE5Q9HCH3 593 aa9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 CISHQ9NSE2 258 aa9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 FAM105AQ9NUU6 356 aa9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 SNTG2Q9NY99 539 aa9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 GMIPQ9P107 970 aa9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 CD300AQ9UGN4 299 aa9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 COPG1Q9Y678 874 aaKnown RBP9.19□□□□□ -0.94
TUBA1A-202ENST00000301071 PTPRSQ13332 1948 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 WDR27A2RRH5 827 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 TBKBP1A7MCY6 615 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 BBIP1A8MTZ0 92 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 RNF103O00237 685 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 NEMP1O14524 444 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 GRID2O43424 1007 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 NPHS1O60500 1241 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 FOXD2O60548 495 aaPredicted RBP9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 UGT2B4P06133 528 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 ZNF182P17025 639 aaPredicted RBP9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 TCN1P20061 433 aaPredicted RBP9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 CD247P20963 164 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 SERPINB1P30740 379 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 MSX2P35548 267 aaPredicted RBP9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 LEPRP48357 1165 aaKnown RBP9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 LIMK2P53671 638 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 GNA12Q03113 381 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 NSUN2Q08J23 767 aaKnown RBP eCLIP9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 CDC20Q12834 499 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 LRP8Q14114 963 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 SLC10A6Q3KNW5 377 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 GLRA4Q5JXX5 417 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 TBCELQ5QJ74 424 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 RBM48Q5RL73 367 aaKnown RBP9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 LRRC8EQ6NSJ5 796 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 TTC23LQ6PF05 361 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 AGMOQ6ZNB7 445 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 DEFB128Q7Z7B8 93 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 CLEC14AQ86T13 490 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 CBR4Q8N4T8 237 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 MAELQ96JY0 434 aaKnown RBP9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 NPAS2Q99743 824 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 ADAM2Q99965 735 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 RNF39Q9H2S5 420 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 WDR55Q9H6Y2 383 aaPredicted RBP9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 SP140LQ9H930 580 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 RPF1Q9H9Y2 349 aaKnown RBP9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 ANKHQ9HCJ1 492 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 THG1LQ9NWX6 298 aaKnown RBP9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 NSMCE4AQ9NXX6 385 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 SMPD3Q9NY59 655 aaPredicted RBP9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 TMEM181Q9P2C4 612 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 SATB2Q9UPW6 733 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 IPPQ9Y573 584 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 CORINQ9Y5Q5 1042 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 RAD54BQ9Y620 910 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 SCN1AP35498 2009 aa9.18□□□□□ -0.94
TUBA1A-202ENST00000301071 FNDC1Q4ZHG4 1894 aaPredicted RBP9.17□□□□□ -0.94
TUBA1A-202ENST00000301071 ISPDA4D126 451 aa9.17□□□□□ -0.94
TUBA1A-202ENST00000301071 E7ENX8 843 aa9.17□□□□□ -0.94
TUBA1A-202ENST00000301071 STX16-NPEPL1H3BU86 382 aa9.17□□□□□ -0.94
TUBA1A-202ENST00000301071 TNFRSF10AO00220 468 aa9.17□□□□□ -0.94
TUBA1A-202ENST00000301071 NUAK1O60285 661 aa9.17□□□□□ -0.94
TUBA1A-202ENST00000301071 ABCB7O75027 752 aa9.17□□□□□ -0.94
TUBA1A-202ENST00000301071 TIPRLO75663 272 aa9.17□□□□□ -0.94
TUBA1A-202ENST00000301071 MYO1DO94832 1006 aa9.17□□□□□ -0.94
TUBA1A-202ENST00000301071 PIGNO95427 931 aa9.17□□□□□ -0.94
TUBA1A-202ENST00000301071 GPIP06744 558 aa9.17□□□□□ -0.94
TUBA1A-202ENST00000301071 AKAP5P24588 427 aa9.17□□□□□ -0.94
TUBA1A-202ENST00000301071 MPSTP25325 297 aa9.17□□□□□ -0.94
TUBA1A-202ENST00000301071 HPCAL1P37235 193 aa9.17□□□□□ -0.94
TUBA1A-202ENST00000301071 ATP4BP51164 291 aa9.17□□□□□ -0.94
TUBA1A-202ENST00000301071 NME3Q13232 169 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms