RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 ACTL7AQ9Y615 435 aa24.46■■□□□ 1.51
SPTSSA-201ENST00000298130 ARL5AQ9Y689 179 aa24.46■■□□□ 1.51
SPTSSA-201ENST00000298130 HNRNPRO43390 633 aaKnown RBP24.45■■□□□ 1.5
SPTSSA-201ENST00000298130 PEX11BO96011 259 aa24.45■■□□□ 1.5
SPTSSA-201ENST00000298130 ASLP04424 464 aa24.45■■□□□ 1.5
SPTSSA-201ENST00000298130 CES1P23141 567 aa24.45■■□□□ 1.5
SPTSSA-201ENST00000298130 LEPRP48357 1165 aaKnown RBP24.45■■□□□ 1.5
SPTSSA-201ENST00000298130 UNC50Q53HI1 259 aa24.45■■□□□ 1.5
SPTSSA-201ENST00000298130 B3GNT6Q6ZMB0 384 aa24.45■■□□□ 1.5
SPTSSA-201ENST00000298130 LCA5Q86VQ0 697 aa24.45■■□□□ 1.5
SPTSSA-201ENST00000298130 TTC16Q8NEE8 873 aa24.45■■□□□ 1.5
SPTSSA-201ENST00000298130 ABCC13Q9NSE7 274 aa24.45■■□□□ 1.5
SPTSSA-201ENST00000298130 SUCOQ9UBS9 1254 aaKnown RBP24.45■■□□□ 1.5
SPTSSA-201ENST00000298130 ANKRD33BA6NCL7 494 aa24.45■■□□□ 1.5
SPTSSA-201ENST00000298130 UBXN8O00124 270 aa24.45■■□□□ 1.5
SPTSSA-201ENST00000298130 SOCS2O14508 198 aa24.45■■□□□ 1.5
SPTSSA-201ENST00000298130 SRP72O76094 671 aaKnown RBP24.45■■□□□ 1.5
SPTSSA-201ENST00000298130 PFKFB4Q16877 469 aa24.45■■□□□ 1.5
SPTSSA-201ENST00000298130 CHERPQ8IWX8 916 aaKnown RBP24.45■■□□□ 1.5
SPTSSA-201ENST00000298130 DDIASQ8IXT1 998 aa24.45■■□□□ 1.5
SPTSSA-201ENST00000298130 EZH1Q92800 747 aaPredicted RBP24.45■■□□□ 1.5
SPTSSA-201ENST00000298130 UBXN10Q96LJ8 280 aa24.45■■□□□ 1.5
SPTSSA-201ENST00000298130 TSPAN18Q96SJ8 248 aa24.45■■□□□ 1.5
SPTSSA-201ENST00000298130 CCT7Q99832 543 aa24.45■■□□□ 1.5
SPTSSA-201ENST00000298130 SLC2A11Q9BYW1 496 aa24.45■■□□□ 1.5
SPTSSA-201ENST00000298130 UTP6Q9NYH9 597 aaKnown RBP24.45■■□□□ 1.5
SPTSSA-201ENST00000298130 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.45■■□□□ 1.5
SPTSSA-201ENST00000298130 APLP1P51693 650 aa24.44■■□□□ 1.5
SPTSSA-201ENST00000298130 KPNA2P52292 529 aaKnown RBP24.44■■□□□ 1.5
SPTSSA-201ENST00000298130 MIB1Q86YT6 1006 aa24.44■■□□□ 1.5
SPTSSA-201ENST00000298130 SPPL2CQ8IUH8 684 aa24.44■■□□□ 1.5
SPTSSA-201ENST00000298130 SPATA2LQ8IUW3 424 aaPredicted RBP24.44■■□□□ 1.5
SPTSSA-201ENST00000298130 TRIML2Q8N7C3 387 aa24.44■■□□□ 1.5
SPTSSA-201ENST00000298130 PTGR2Q8N8N7 351 aaPredicted RBP24.44■■□□□ 1.5
SPTSSA-201ENST00000298130 C19orf60Q96EN9 201 aa24.44■■□□□ 1.5
SPTSSA-201ENST00000298130 RGS18Q9NS28 235 aa24.44■■□□□ 1.5
SPTSSA-201ENST00000298130 DNAJC15Q9Y5T4 150 aa24.44■■□□□ 1.5
SPTSSA-201ENST00000298130 DICER1Q9UPY3 1922 aaKnown RBP24.44■■□□□ 1.5
SPTSSA-201ENST00000298130 SEC24DO94855 1032 aaPredicted RBP24.44■■□□□ 1.5
SPTSSA-201ENST00000298130 S1PR4O95977 384 aa24.44■■□□□ 1.5
SPTSSA-201ENST00000298130 SLC5A2P31639 672 aa24.44■■□□□ 1.5
SPTSSA-201ENST00000298130 MAP2K5Q13163 448 aa24.44■■□□□ 1.5
SPTSSA-201ENST00000298130 APOFQ13790 326 aa24.44■■□□□ 1.5
SPTSSA-201ENST00000298130 GALNT3Q14435 633 aa24.44■■□□□ 1.5
SPTSSA-201ENST00000298130 PSMD5Q16401 504 aa24.44■■□□□ 1.5
SPTSSA-201ENST00000298130 GNASQ5JWF2 1037 aa24.44■■□□□ 1.5
SPTSSA-201ENST00000298130 SIRPB2Q5JXA9 342 aa24.44■■□□□ 1.5
SPTSSA-201ENST00000298130 ZNF678Q5SXM1 525 aa24.44■■□□□ 1.5
SPTSSA-201ENST00000298130 LARP4Q71RC2 724 aaKnown RBP eCLIP24.44■■□□□ 1.55e-8■□□□□ 9
SPTSSA-201ENST00000298130 IFNEQ86WN2 208 aa24.44■■□□□ 1.5
SPTSSA-201ENST00000298130 TSPAN14Q8NG11 270 aa24.44■■□□□ 1.5
SPTSSA-201ENST00000298130 B3GALT6Q96L58 329 aa24.44■■□□□ 1.5
SPTSSA-201ENST00000298130 PARK7Q99497 189 aaKnown RBP24.44■■□□□ 1.5
SPTSSA-201ENST00000298130 MID1IP1Q9NPA3 183 aa24.44■■□□□ 1.5
SPTSSA-201ENST00000298130 FGF10O15520 208 aaPredicted RBP24.43■■□□□ 1.5
SPTSSA-201ENST00000298130 SOAT2O75908 522 aa24.43■■□□□ 1.5
SPTSSA-201ENST00000298130 MMP2P08253 660 aa24.43■■□□□ 1.5
SPTSSA-201ENST00000298130 GNAO1P09471 354 aa24.43■■□□□ 1.5
SPTSSA-201ENST00000298130 GRK4P32298 578 aa24.43■■□□□ 1.5
SPTSSA-201ENST00000298130 SLC39A12Q504Y0 691 aa24.43■■□□□ 1.5
SPTSSA-201ENST00000298130 MARC1Q5VT66 337 aa24.43■■□□□ 1.5
SPTSSA-201ENST00000298130 ANKRD23Q86SG2 305 aa24.43■■□□□ 1.5
SPTSSA-201ENST00000298130 SLC25A51Q9H1U9 297 aa24.43■■□□□ 1.5
SPTSSA-201ENST00000298130 TBC1D13Q9NVG8 400 aa24.43■■□□□ 1.5
SPTSSA-201ENST00000298130 CD300AQ9UGN4 299 aa24.43■■□□□ 1.5
SPTSSA-201ENST00000298130 ANKRD12Q6UB98 2062 aa24.43■■□□□ 1.5
SPTSSA-201ENST00000298130 ZNF189O75820 626 aaPredicted RBP24.43■■□□□ 1.5
SPTSSA-201ENST00000298130 CLIC3O95833 236 aa24.43■■□□□ 1.5
SPTSSA-201ENST00000298130 C8BP07358 591 aa24.43■■□□□ 1.5
SPTSSA-201ENST00000298130 RBP1P09455 135 aa24.43■■□□□ 1.5
SPTSSA-201ENST00000298130 LINC00032P0C843 101 aa24.43■■□□□ 1.5
SPTSSA-201ENST00000298130 ZNF135P52742 658 aaPredicted RBP24.43■■□□□ 1.5
SPTSSA-201ENST00000298130 SEMA3AQ14563 771 aa24.43■■□□□ 1.5
SPTSSA-201ENST00000298130 ACAP2Q15057 778 aa24.43■■□□□ 1.5
SPTSSA-201ENST00000298130 MAP7D1Q3KQU3 841 aa24.43■■□□□ 1.5
SPTSSA-201ENST00000298130 KRT80Q6KB66 452 aa24.43■■□□□ 1.5
SPTSSA-201ENST00000298130 SCIMPQ6UWF3 145 aa24.43■■□□□ 1.5
SPTSSA-201ENST00000298130 ZBTB49Q6ZSB9 765 aa24.43■■□□□ 1.5
SPTSSA-201ENST00000298130 DHFR2Q86XF0 187 aa24.43■■□□□ 1.5
SPTSSA-201ENST00000298130 OR13C4Q8NGS5 318 aa24.43■■□□□ 1.5
SPTSSA-201ENST00000298130 ZC3H15Q8WU90 426 aaKnown RBP24.43■■□□□ 1.5
SPTSSA-201ENST00000298130 SMIM14Q96QK8 99 aa24.43■■□□□ 1.5
SPTSSA-201ENST00000298130 SP110Q9HB58 689 aa24.43■■□□□ 1.5
SPTSSA-201ENST00000298130 TRPV2Q9Y5S1 764 aa24.43■■□□□ 1.5
SPTSSA-201ENST00000298130 ZNF236Q9UL36 1845 aa24.43■■□□□ 1.5
SPTSSA-201ENST00000298130 A0A0J9YYE9 177 aa24.42■■□□□ 1.5
SPTSSA-201ENST00000298130 IMPDH1P20839 514 aa24.42■■□□□ 1.5
SPTSSA-201ENST00000298130 CLCN5P51795 746 aa24.42■■□□□ 1.5
SPTSSA-201ENST00000298130 PLOD1Q02809 727 aaPredicted RBP24.42■■□□□ 1.5
SPTSSA-201ENST00000298130 TIGD7Q6NT04 549 aaPredicted RBP24.42■■□□□ 1.5
SPTSSA-201ENST00000298130 ZNF549Q6P9A3 640 aa24.42■■□□□ 1.5
SPTSSA-201ENST00000298130 PGBD5Q8N414 524 aa24.42■■□□□ 1.5
SPTSSA-201ENST00000298130 TRPC4APQ8TEL6 797 aa24.42■■□□□ 1.5
SPTSSA-201ENST00000298130 IMP4Q96G21 291 aaKnown RBP24.42■■□□□ 1.5
SPTSSA-201ENST00000298130 PKMYT1Q99640 499 aa24.42■■□□□ 1.5
SPTSSA-201ENST00000298130 SMOC2Q9H3U7 446 aa24.42■■□□□ 1.5
SPTSSA-201ENST00000298130 PTTG2Q9NZH5 202 aa24.42■■□□□ 1.5
SPTSSA-201ENST00000298130 HSFX1Q9UBD0 423 aa24.42■■□□□ 1.5
SPTSSA-201ENST00000298130 FNDC3AQ9Y2H6 1198 aaKnown RBP24.42■■□□□ 1.5
SPTSSA-201ENST00000298130 ARHGAP10A1A4S6 786 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms