RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 COL6A2P12110 1019 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 MYL4P12829 197 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 SP100P23497 879 aaPredicted RBP11.8□□□□□ -0.52
RHO-201ENST00000296271 GNA12Q03113 381 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 ASPHQ12797 758 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 CEACAM7Q14002 265 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 OR4D1Q15615 310 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 FAM83EQ2M2I3 478 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 FSCBQ5H9T9 825 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 SPATA31D4Q6ZUB0 917 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 CUZD1Q86UP6 607 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 CCDC117Q8IWD4 279 aaPredicted RBP11.8□□□□□ -0.52
RHO-201ENST00000296271 PCDH20Q8N6Y1 951 aaKnown RBP11.8□□□□□ -0.52
RHO-201ENST00000296271 MDGA1Q8NFP4 955 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 PDCD6IPQ8WUM4 868 aaKnown RBP11.8□□□□□ -0.52
RHO-201ENST00000296271 ESAMQ96AP7 390 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 MIEF2Q96C03 454 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 TMA16Q96EY4 203 aaKnown RBP11.8□□□□□ -0.52
RHO-201ENST00000296271 KCNA7Q96RP8 456 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 SLC30A3Q99726 388 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 NDE1Q9NXR1 346 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.8□□□□□ -0.52
RHO-201ENST00000296271 AK5Q9Y6K8 562 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 A0A087X1B8 175 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 UBA6A0AVT1 1052 aaPredicted RBP11.8□□□□□ -0.52
RHO-201ENST00000296271 UBXN8O00124 270 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 ACSL4O60488 711 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 SMNDC1O75940 238 aaKnown RBP eCLIP11.8□□□□□ -0.52
RHO-201ENST00000296271 SUPT7LO94864 414 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 CSPG5O95196 566 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 PRLP01236 227 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 ATP5BP06576 529 aaKnown RBP11.8□□□□□ -0.52
RHO-201ENST00000296271 ACADSP16219 412 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 PEX2P28328 305 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 PPARGP37231 505 aaPredicted RBP11.8□□□□□ -0.52
RHO-201ENST00000296271 NOGQ13253 232 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 SFT2D3Q587I9 215 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 C6orf163Q5TEZ5 329 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 TMCO4Q5TGY1 634 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 LRRC49Q8IUZ0 686 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 FBXW8Q8N3Y1 598 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 OR4K2Q8NGD2 314 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 SPPL2BQ8TCT7 592 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 RMDN1Q96DB5 314 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 MFSD1Q9H3U5 465 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 GSTO2Q9H4Y5 243 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 MYO7AQ13402 2215 aa11.8□□□□□ -0.52
RHO-201ENST00000296271 RGSL1A5PLK6 1076 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 TCAF2A6NFQ2 919 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 H3BNX3 289 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 SLC7A4O43246 635 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 MAP3K7O43318 606 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 OR1I1O60431 355 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 WISP3O95389 354 aaPredicted RBP11.79□□□□□ -0.52
RHO-201ENST00000296271 PRAMEF12O95522 483 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 RAG1P15918 1043 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 FMO4P31512 558 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 GCKP35557 465 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 ATP5C1P36542 298 aaKnown RBP11.79□□□□□ -0.52
RHO-201ENST00000296271 CLCN5P51795 746 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 PRKAA2P54646 552 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 MTTPP55157 894 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 AP2B1P63010 937 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 YBX1P67809 324 aaKnown RBP11.79□□□□□ -0.52
RHO-201ENST00000296271 ZXDBP98169 803 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 ECT2LQ008S8 904 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 PLD1Q13393 1074 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 CYLC2Q14093 348 aaPredicted RBP11.79□□□□□ -0.52
RHO-201ENST00000296271 TSNAXIP1Q2TAA8 658 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 PARP15Q460N3 678 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 SETMARQ53H47 684 aaPredicted RBP11.79□□□□□ -0.52
RHO-201ENST00000296271 LAYNQ6UX15 382 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 ACAD11Q709F0 780 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 OR6K2Q8NGY2 324 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 RTKNQ9BST9 563 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 UNC93B1Q9H1C4 597 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 MED16Q9Y2X0 877 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 DOCK6Q96HP0 2047 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 RANBP2P49792 3224 aaKnown RBP11.79□□□□□ -0.52
RHO-201ENST00000296271 EME2A4GXA9 379 aaPredicted RBP11.79□□□□□ -0.52
RHO-201ENST00000296271 ZNF840PA6NDX5 716 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 NCF1BA6NI72 391 aaPredicted RBP11.79□□□□□ -0.52
RHO-201ENST00000296271 GOLGA8CPA6NN73 597 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 NCF1CA8MVU1 366 aaPredicted RBP11.79□□□□□ -0.52
RHO-201ENST00000296271 H2AFYO75367 372 aaKnown RBP11.79□□□□□ -0.52
RHO-201ENST00000296271 NCF1P14598 390 aaPredicted RBP11.79□□□□□ -0.52
RHO-201ENST00000296271 HMGA1P17096 107 aaKnown RBP11.79□□□□□ -0.52
RHO-201ENST00000296271 PAX3P23760 479 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 CORO1AP31146 461 aaKnown RBP11.79□□□□□ -0.52
RHO-201ENST00000296271 CDC16Q13042 620 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 AGAP9Q5VTM2 703 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 TMEM154Q6P9G4 183 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 NPAS4Q8IUM7 802 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 PIANPQ8IYJ0 282 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 EFHBQ8N7U6 833 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 TRIB3Q96RU7 358 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 RANBP9Q96S59 729 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 ZNF184Q99676 751 aaPredicted RBP11.79□□□□□ -0.52
RHO-201ENST00000296271 CLSTN3Q9BQT9 956 aa11.79□□□□□ -0.52
RHO-201ENST00000296271 EBF3Q9H4W6 596 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms