RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 GPN3Q9UHW5 284 aaPredicted RBP17.74■□□□□ 0.43
CDC42EP3-201ENST00000295324 ENOPH1Q9UHY7 261 aa17.74■□□□□ 0.43
CDC42EP3-201ENST00000295324 CDKN2BP42772 138 aa17.74■□□□□ 0.43
CDC42EP3-201ENST00000295324 PDGFRLQ15198 375 aa17.74■□□□□ 0.43
CDC42EP3-201ENST00000295324 CDCA2Q69YH5 1023 aaPredicted RBP17.74■□□□□ 0.43
CDC42EP3-201ENST00000295324 AUTS2Q8WXX7 1259 aa17.74■□□□□ 0.43
CDC42EP3-201ENST00000295324 TRIB2Q92519 343 aa17.74■□□□□ 0.43
CDC42EP3-201ENST00000295324 CLIP3Q96DZ5 547 aa17.74■□□□□ 0.43
CDC42EP3-201ENST00000295324 TLR6Q9Y2C9 796 aa17.74■□□□□ 0.43
CDC42EP3-201ENST00000295324 FFAR3O14843 346 aa17.74■□□□□ 0.43
CDC42EP3-201ENST00000295324 GPR42O15529 346 aa17.74■□□□□ 0.43
CDC42EP3-201ENST00000295324 DSC2Q02487 901 aa17.74■□□□□ 0.43
CDC42EP3-201ENST00000295324 TMEM63BQ5T3F8 832 aa17.74■□□□□ 0.43
CDC42EP3-201ENST00000295324 VITQ6UXI7 678 aa17.74■□□□□ 0.43
CDC42EP3-201ENST00000295324 SCAMP5Q8TAC9 235 aa17.74■□□□□ 0.43
CDC42EP3-201ENST00000295324 NKD2Q969F2 451 aaPredicted RBP17.74■□□□□ 0.43
CDC42EP3-201ENST00000295324 ACDQ96AP0 544 aa17.74■□□□□ 0.43
CDC42EP3-201ENST00000295324 HMCESQ96FZ2 354 aa17.74■□□□□ 0.43
CDC42EP3-201ENST00000295324 PRKAG1P54619 331 aa17.74■□□□□ 0.43
CDC42EP3-201ENST00000295324 KLC1Q07866 573 aa17.74■□□□□ 0.43
CDC42EP3-201ENST00000295324 GSTA3Q16772 222 aa17.74■□□□□ 0.43
CDC42EP3-201ENST00000295324 FBXO46Q6PJ61 603 aaPredicted RBP17.74■□□□□ 0.43
CDC42EP3-201ENST00000295324 THAP11Q96EK4 314 aa17.74■□□□□ 0.43
CDC42EP3-201ENST00000295324 CCT7Q99832 543 aa17.74■□□□□ 0.43
CDC42EP3-201ENST00000295324 COLEC10Q9Y6Z7 277 aa17.74■□□□□ 0.43
CDC42EP3-201ENST00000295324 H0Y858 1186 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 NOS3P29474 1203 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 TBCELQ5QJ74 424 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 PACS1Q6VY07 963 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 CLEC20AQ6ZU45 233 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 TCAIMQ8N3R3 496 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 HAPLN3Q96S86 360 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 TRMT61BQ9BVS5 477 aaKnown RBP17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 PHACTR1Q9C0D0 580 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 KCNK4Q9NYG8 393 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 KLHL20Q9Y2M5 609 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 SQORQ9Y6N5 450 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 DCXO43602 365 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 VNN1O95497 513 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 NQO1P15559 274 aaKnown RBP17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 IFNGR2P38484 337 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 SNAP47Q5SQN1 464 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 CD101Q93033 1021 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 SHDQ96IW2 340 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 SAMD11Q96NU1 681 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 UGT2B28Q9BY64 529 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 M0R2N6 131 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 FASP25445 335 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 FNBP1LQ5T0N5 605 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 DHFR2Q86XF0 187 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 DSELQ8IZU8 1212 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 CDYL2Q8N8U2 506 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 PRCCQ92733 491 aaPredicted RBP17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 OR10H1Q9Y4A9 318 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 TCRBV9S1A1TA0A576 114 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 GRIA4P48058 902 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 SLC11A1P49279 550 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 RCN1Q15293 331 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 SAMD4BQ5PRF9 694 aaKnown RBP17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 SNX15Q9NRS6 342 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 ABCB8Q9NUT2 735 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 XPR1Q9UBH6 696 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 INVSQ9Y283 1065 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 FCF1Q9Y324 198 aaKnown RBP17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 FKBP6O75344 327 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 FSBPO95073 299 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 AP2A1O95782 977 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 GDI1P31150 447 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 USP4Q13107 963 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 TRMT5Q32P41 509 aaKnown RBP17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 PLEKHM3Q6ZWE6 761 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 ARCQ7LC44 396 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 SNX32Q86XE0 403 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 LIMD1Q9UGP4 676 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 NOCTQ9UK39 431 aaKnown RBP17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 PCDHGC4Q9Y5F7 938 aa17.73■□□□□ 0.43
CDC42EP3-201ENST00000295324 FGF18O76093 207 aa17.72■□□□□ 0.43
CDC42EP3-201ENST00000295324 IRX1P78414 480 aaPredicted RBP17.72■□□□□ 0.43
CDC42EP3-201ENST00000295324 CHSY3Q70JA7 882 aa17.72■□□□□ 0.43
CDC42EP3-201ENST00000295324 TAF8Q7Z7C8 310 aa17.72■□□□□ 0.43
CDC42EP3-201ENST00000295324 CELF5Q8N6W0 485 aaKnown RBP17.72■□□□□ 0.43
CDC42EP3-201ENST00000295324 DTNBP1Q96EV8 351 aa17.72■□□□□ 0.43
CDC42EP3-201ENST00000295324 PEX11AO75192 247 aa17.72■□□□□ 0.43
CDC42EP3-201ENST00000295324 OR6A2O95222 327 aa17.72■□□□□ 0.43
CDC42EP3-201ENST00000295324 TCF3P15923 654 aa17.72■□□□□ 0.43
CDC42EP3-201ENST00000295324 SCNN1AP37088 669 aa17.72■□□□□ 0.43
CDC42EP3-201ENST00000295324 RFTN1Q14699 578 aaPredicted RBP17.72■□□□□ 0.43
CDC42EP3-201ENST00000295324 CPSF6Q16630 551 aaKnown RBP eCLIP17.72■□□□□ 0.43
CDC42EP3-201ENST00000295324 ADGRF1Q5T601 910 aa17.72■□□□□ 0.43
CDC42EP3-201ENST00000295324 SPEF2Q9C093 1822 aa17.72■□□□□ 0.43
CDC42EP3-201ENST00000295324 BANF1O75531 89 aa17.72■□□□□ 0.43
CDC42EP3-201ENST00000295324 RASGRP1O95267 797 aa17.72■□□□□ 0.43
CDC42EP3-201ENST00000295324 LBX1P52954 281 aa17.72■□□□□ 0.43
CDC42EP3-201ENST00000295324 LPIN1Q14693 890 aa17.72■□□□□ 0.43
CDC42EP3-201ENST00000295324 MAMDC4Q6UXC1 1216 aa17.72■□□□□ 0.43
CDC42EP3-201ENST00000295324 R3HCC1LQ7Z5L2 792 aaKnown RBP17.72■□□□□ 0.43
CDC42EP3-201ENST00000295324 CIR1Q86X95 450 aaPredicted RBP17.72■□□□□ 0.43
CDC42EP3-201ENST00000295324 RAD9AQ99638 391 aa17.72■□□□□ 0.43
CDC42EP3-201ENST00000295324 WRAP53Q9BUR4 548 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms