RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 IMPDH1P20839 514 aa16.9■□□□□ 0.3
CHRNE-201ENST00000293780 DSC2Q02487 901 aa16.9■□□□□ 0.3
CHRNE-201ENST00000293780 CREB5Q02930 508 aa16.9■□□□□ 0.3
CHRNE-201ENST00000293780 SLC10A7Q0GE19 358 aa16.9■□□□□ 0.3
CHRNE-201ENST00000293780 FAM110CQ1W6H9 321 aa16.9■□□□□ 0.3
CHRNE-201ENST00000293780 UNC50Q53HI1 259 aa16.9■□□□□ 0.3
CHRNE-201ENST00000293780 ISCA2Q86U28 154 aa16.9■□□□□ 0.3
CHRNE-201ENST00000293780 RETREG3Q86VR2 466 aa16.9■□□□□ 0.3
CHRNE-201ENST00000293780 TMIGD2Q96BF3 282 aa16.9■□□□□ 0.3
CHRNE-201ENST00000293780 HSFX1Q9UBD0 423 aa16.9■□□□□ 0.3
CHRNE-201ENST00000293780 CNOT6Q9ULM6 557 aaKnown RBP16.9■□□□□ 0.3
CHRNE-201ENST00000293780 DMTF1Q9Y222 760 aa16.9■□□□□ 0.3
CHRNE-201ENST00000293780 COL4A4P53420 1690 aaPredicted RBP16.89■□□□□ 0.29
CHRNE-201ENST00000293780 LRRC14BA6NHZ5 514 aa16.89■□□□□ 0.29
CHRNE-201ENST00000293780 ITGB1P05556 798 aa16.89■□□□□ 0.29
CHRNE-201ENST00000293780 SLC7A1P30825 629 aa16.89■□□□□ 0.29
CHRNE-201ENST00000293780 YBX1P67809 324 aaKnown RBP16.89■□□□□ 0.29
CHRNE-201ENST00000293780 TRAP1Q12931 704 aaKnown RBP16.89■□□□□ 0.29
CHRNE-201ENST00000293780 PTPRCAPQ14761 206 aa16.89■□□□□ 0.29
CHRNE-201ENST00000293780 ZNF678Q5SXM1 525 aa16.89■□□□□ 0.29
CHRNE-201ENST00000293780 OR52K2Q8NGK3 314 aa16.89■□□□□ 0.29
CHRNE-201ENST00000293780 PPWD1Q96BP3 646 aaKnown RBP16.89■□□□□ 0.29
CHRNE-201ENST00000293780 PTERQ96BW5 349 aa16.89■□□□□ 0.29
CHRNE-201ENST00000293780 TMEM79Q9BSE2 394 aa16.89■□□□□ 0.29
CHRNE-201ENST00000293780 SLC25A23Q9BV35 468 aa16.89■□□□□ 0.29
CHRNE-201ENST00000293780 SMOC2Q9H3U7 446 aa16.89■□□□□ 0.29
CHRNE-201ENST00000293780 OSER1Q9NX31 292 aa16.89■□□□□ 0.29
CHRNE-201ENST00000293780 A0A1W2PQH9 124 aa16.89■□□□□ 0.29
CHRNE-201ENST00000293780 MYADML2A6NDP7 307 aa16.89■□□□□ 0.29
CHRNE-201ENST00000293780 GJB3O75712 270 aa16.89■□□□□ 0.29
CHRNE-201ENST00000293780 SRP72O76094 671 aaKnown RBP16.89■□□□□ 0.29
CHRNE-201ENST00000293780 MMP2P08253 660 aa16.89■□□□□ 0.29
CHRNE-201ENST00000293780 OR4Q2P0C623 313 aa16.89■□□□□ 0.29
CHRNE-201ENST00000293780 HAPLN1P10915 354 aaPredicted RBP16.89■□□□□ 0.29
CHRNE-201ENST00000293780 RPL10P27635 214 aaKnown RBP16.89■□□□□ 0.29
CHRNE-201ENST00000293780 GRIK1P39086 918 aa16.89■□□□□ 0.29
CHRNE-201ENST00000293780 PURAQ00577 322 aaKnown RBP16.89■□□□□ 0.29
CHRNE-201ENST00000293780 CACNB2Q08289 660 aaPredicted RBP16.89■□□□□ 0.29
CHRNE-201ENST00000293780 SLC14A2Q15849 920 aa16.89■□□□□ 0.29
CHRNE-201ENST00000293780 PIK3R6Q5UE93 754 aa16.89■□□□□ 0.29
CHRNE-201ENST00000293780 C8orf82Q6P1X6 216 aaPredicted RBP16.89■□□□□ 0.29
CHRNE-201ENST00000293780 METTL23Q86XA0 190 aa16.89■□□□□ 0.29
CHRNE-201ENST00000293780 RYBPQ8N488 228 aaPredicted RBP16.89■□□□□ 0.29
CHRNE-201ENST00000293780 TSPAN14Q8NG11 270 aa16.89■□□□□ 0.29
CHRNE-201ENST00000293780 CALML6Q8TD86 181 aa16.89■□□□□ 0.29
CHRNE-201ENST00000293780 DDI1Q8WTU0 396 aa16.89■□□□□ 0.29
CHRNE-201ENST00000293780 CANT1Q8WVQ1 401 aa16.89■□□□□ 0.29
CHRNE-201ENST00000293780 PABPC5Q96DU9 382 aaKnown RBP16.89■□□□□ 0.29
CHRNE-201ENST00000293780 HMCESQ96FZ2 354 aa16.89■□□□□ 0.29
CHRNE-201ENST00000293780 IMP4Q96G21 291 aaKnown RBP16.89■□□□□ 0.29
CHRNE-201ENST00000293780 AP5M1Q9H0R1 490 aa16.89■□□□□ 0.29
CHRNE-201ENST00000293780 AKTIPQ9H8T0 292 aa16.89■□□□□ 0.29
CHRNE-201ENST00000293780 AGO3Q9H9G7 860 aaKnown RBP16.89■□□□□ 0.29
CHRNE-201ENST00000293780 ARNT2Q9HBZ2 717 aa16.89■□□□□ 0.29
CHRNE-201ENST00000293780 ATP13A1Q9HD20 1204 aa16.89■□□□□ 0.29
CHRNE-201ENST00000293780 MRPL40Q9NQ50 206 aaKnown RBP16.89■□□□□ 0.29
CHRNE-201ENST00000293780 CEPT1Q9Y6K0 416 aa16.89■□□□□ 0.29
CHRNE-201ENST00000293780 S1PR4O95977 384 aa16.88■□□□□ 0.29
CHRNE-201ENST00000293780 PENKP01210 267 aaPredicted RBP16.88■□□□□ 0.29
CHRNE-201ENST00000293780 CHRNA1P02708 482 aa16.88■□□□□ 0.29
CHRNE-201ENST00000293780 SLC5A2P31639 672 aa16.88■□□□□ 0.29
CHRNE-201ENST00000293780 RPL9P32969 192 aaKnown RBP16.88■□□□□ 0.29
CHRNE-201ENST00000293780 GRIA3P42263 894 aa16.88■□□□□ 0.29
CHRNE-201ENST00000293780 NR1H2P55055 460 aa16.88■□□□□ 0.29
CHRNE-201ENST00000293780 SH3BGRP55822 239 aaPredicted RBP16.88■□□□□ 0.29
CHRNE-201ENST00000293780 SH3BP2P78314 561 aa16.88■□□□□ 0.29
CHRNE-201ENST00000293780 TXNL4AP83876 142 aaKnown RBP16.88■□□□□ 0.29
CHRNE-201ENST00000293780 UGT3A2Q3SY77 523 aa16.88■□□□□ 0.29
CHRNE-201ENST00000293780 SDHAF4Q5VUM1 108 aa16.88■□□□□ 0.29
CHRNE-201ENST00000293780 CARM1Q86X55 608 aa16.88■□□□□ 0.29
CHRNE-201ENST00000293780 SLC22A9Q8IVM8 553 aa16.88■□□□□ 0.29
CHRNE-201ENST00000293780 SCML4Q8N228 414 aa16.88■□□□□ 0.29
CHRNE-201ENST00000293780 TOP1MTQ969P6 601 aa16.88■□□□□ 0.29
CHRNE-201ENST00000293780 SLC45A3Q96JT2 553 aa16.88■□□□□ 0.29
CHRNE-201ENST00000293780 CAAP1Q9H8G2 361 aa16.88■□□□□ 0.29
CHRNE-201ENST00000293780 CNTN5O94779 1100 aa16.88■□□□□ 0.29
CHRNE-201ENST00000293780 SIX3O95343 332 aaPredicted RBP16.88■□□□□ 0.29
CHRNE-201ENST00000293780 WISP3O95389 354 aaPredicted RBP16.88■□□□□ 0.29
CHRNE-201ENST00000293780 ATP6V1B2P21281 511 aa16.88■□□□□ 0.29
CHRNE-201ENST00000293780 GPX3P22352 226 aa16.88■□□□□ 0.29
CHRNE-201ENST00000293780 HOXC8P31273 242 aa16.88■□□□□ 0.29
CHRNE-201ENST00000293780 MLLT6P55198 1093 aaPredicted RBP16.88■□□□□ 0.29
CHRNE-201ENST00000293780 SAMD4BQ5PRF9 694 aaKnown RBP16.88■□□□□ 0.29
CHRNE-201ENST00000293780 FAM45BPQ6NSW5 357 aa16.88■□□□□ 0.29
CHRNE-201ENST00000293780 NUP93Q8N1F7 819 aa16.88■□□□□ 0.29
CHRNE-201ENST00000293780 FAM45AQ8TCE6 357 aa16.88■□□□□ 0.29
CHRNE-201ENST00000293780 C19orf60Q96EN9 201 aa16.88■□□□□ 0.29
CHRNE-201ENST00000293780 TSPAN17Q96FV3 270 aa16.88■□□□□ 0.29
CHRNE-201ENST00000293780 DSEQ9UL01 958 aa16.88■□□□□ 0.29
CHRNE-201ENST00000293780 TMCO1Q9UM00 188 aa16.88■□□□□ 0.29
CHRNE-201ENST00000293780 GIT1Q9Y2X7 761 aa16.88■□□□□ 0.29
CHRNE-201ENST00000293780 TRPV2Q9Y5S1 764 aa16.88■□□□□ 0.29
CHRNE-201ENST00000293780 M0QZ92 97 aa16.87■□□□□ 0.29
CHRNE-201ENST00000293780 SOCS2O14508 198 aa16.87■□□□□ 0.29
CHRNE-201ENST00000293780 TNFRSF10BO14763 440 aa16.87■□□□□ 0.29
CHRNE-201ENST00000293780 FOXA1P55317 472 aa16.87■□□□□ 0.29
CHRNE-201ENST00000293780 FSCN1Q16658 493 aaKnown RBP16.87■□□□□ 0.29
CHRNE-201ENST00000293780 MORN1Q5T089 497 aa16.87■□□□□ 0.29
CHRNE-201ENST00000293780 OVOS1Q6IE37 1185 aa16.87■□□□□ 0.29
CHRNE-201ENST00000293780 DHFR2Q86XF0 187 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms