RNA–Protein interactions for RNA: ENST00000288599.9

NCOA1-201, Transcript of nuclear receptor coactivator 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCOA1, Length 6,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-201ENST00000288599 AMBRA1Q9C0C7 1298 aa4.4□□□□□ -1.71
NCOA1-201ENST00000288599 NELFAQ9H3P2 528 aa4.4□□□□□ -1.71
NCOA1-201ENST00000288599 TMEM165Q9HC07 324 aa4.4□□□□□ -1.71
NCOA1-201ENST00000288599 AGPAT4Q9NRZ5 378 aa4.4□□□□□ -1.71
NCOA1-201ENST00000288599 TMEM63CQ9P1W3 806 aa4.4□□□□□ -1.71
NCOA1-201ENST00000288599 USP42Q9H9J4 1324 aaKnown RBP4.4□□□□□ -1.71
NCOA1-201ENST00000288599 PNMA6EA0A0J9YXQ4 647 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 ESYT3A0FGR9 886 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 PGRMC1O00264 195 aaKnown RBP4.39□□□□□ -1.71
NCOA1-201ENST00000288599 FOXN3O00409 490 aaPredicted RBP4.39□□□□□ -1.71
NCOA1-201ENST00000288599 EI24O14681 340 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 LSM1O15116 133 aaKnown RBP4.39□□□□□ -1.71
NCOA1-201ENST00000288599 SGSM2O43147 1006 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 CTIFO43310 598 aaKnown RBP4.39□□□□□ -1.71
NCOA1-201ENST00000288599 NR2C1P13056 603 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 ATP5A1P25705 553 aaKnown RBP4.39□□□□□ -1.71
NCOA1-201ENST00000288599 ADH7P40394 386 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 INHBEP58166 350 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 ZNF211Q13398 564 aaPredicted RBP4.39□□□□□ -1.71
NCOA1-201ENST00000288599 PTK6Q13882 451 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 AARDQ4LEZ3 155 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 ASPRV1Q53RT3 343 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 PAGE2BQ5JRK9 111 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 ANO7Q6IWH7 933 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 APTXQ7Z2E3 356 aaKnown RBP4.39□□□□□ -1.71
NCOA1-201ENST00000288599 STRA8Q7Z7C7 330 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 FAM228AQ86W67 206 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 TRAPPC5Q8IUR0 188 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 GOLM1Q8NBJ4 401 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 C11orf65Q8NCR3 313 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 SPRYD4Q8WW59 207 aaPredicted RBP4.39□□□□□ -1.71
NCOA1-201ENST00000288599 FCAMRQ8WWV6 532 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 DIO2Q92813 273 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 PTCD3Q96EY7 689 aaKnown RBP4.39□□□□□ -1.71
NCOA1-201ENST00000288599 RNF145Q96MT1 663 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 ZPBPQ9BS86 351 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 GOLPH3LQ9H4A5 285 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 FAM83DQ9H4H8 585 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 ZCCHC17Q9NP64 241 aaKnown RBP4.39□□□□□ -1.71
NCOA1-201ENST00000288599 CAPN8A6NHC0 703 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 CD3EAPO15446 510 aaKnown RBP4.39□□□□□ -1.71
NCOA1-201ENST00000288599 PRPF3O43395 683 aaKnown RBP4.39□□□□□ -1.71
NCOA1-201ENST00000288599 RGS14O43566 566 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 PSMG1O95456 288 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 PGK1P00558 417 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 ITGB3P05106 788 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 IL6P05231 212 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 NCK1P16333 377 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 PFKLP17858 780 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 UBE2NP61088 152 aaKnown RBP4.39□□□□□ -1.71
NCOA1-201ENST00000288599 PTSQ03393 145 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 MAN2A1Q16706 1144 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 MTHFSDQ2M296 383 aaKnown RBP4.39□□□□□ -1.71
NCOA1-201ENST00000288599 FAM26FQ5R3K3 315 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 CFAP52Q8N1V2 620 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 BEND7Q8N7W2 519 aaPredicted RBP4.39□□□□□ -1.71
NCOA1-201ENST00000288599 TXNDC5Q8NBS9 432 aaKnown RBP4.39□□□□□ -1.71
NCOA1-201ENST00000288599 FAM172AQ8WUF8 416 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 OR8D1Q8WZ84 308 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 LRRC58Q96CX6 371 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 CBWD1Q9BRT8 395 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 CD248Q9HCU0 757 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 CLIC4Q9Y696 253 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 STRCP1A6NGW2 1772 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 SHANK3Q9BYB0 1731 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 BCLAF3A2AJT9 711 aaKnown RBP4.39□□□□□ -1.71
NCOA1-201ENST00000288599 DRGXA6NNA5 263 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 A8MUI8 341 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 ZNF879B4DU55 563 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 RBAK-RBAKDNI3L0D1 243 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 L7N2F9 121 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 IL1BP01584 269 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 MSX2P35548 267 aaPredicted RBP4.39□□□□□ -1.71
NCOA1-201ENST00000288599 VAMP2P63027 116 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 KCNC4Q03721 635 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 SMARCB1Q12824 385 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 PCSK7Q16549 785 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 C1orf189Q5VU69 101 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 SWSAP1Q6NVH7 229 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 ZC3HC1Q86WB0 502 aaKnown RBP4.39□□□□□ -1.71
NCOA1-201ENST00000288599 OR9K2Q8NGE7 335 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 ST8SIA2Q92186 375 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 UCN3Q969E3 161 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 CPNE2Q96FN4 548 aaPredicted RBP4.39□□□□□ -1.71
NCOA1-201ENST00000288599 KIRREL1Q96J84 757 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 OCEL1Q9H607 264 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 CERS4Q9HA82 394 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 GNG13Q9P2W3 67 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 FBXL17Q9UF56 701 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 PCDHA10Q9Y5I2 948 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 FKBP7Q9Y680 259 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 GPR75-ASB3A0A0A6YYF3 556 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 FAM25EA8MYX2 175 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 ERAL1O75616 437 aaKnown RBP4.39□□□□□ -1.71
NCOA1-201ENST00000288599 PAPSS2O95340 614 aaPredicted RBP4.39□□□□□ -1.71
NCOA1-201ENST00000288599 TGFB3P10600 412 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 F2RP25116 425 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 NDUFA8P51970 172 aa4.39□□□□□ -1.71
NCOA1-201ENST00000288599 AGFG1P52594 562 aaKnown RBP4.39□□□□□ -1.71
NCOA1-201ENST00000288599 ZNF543Q08ER8 600 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms