RNA–Protein interactions for RNA: ENST00000287538.9

ZIC3-201, Transcript of Zic family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZIC3, Length 3,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3-201ENST00000287538 ARL10Q8N8L6 244 aa12.93□□□□□ -0.34
ZIC3-201ENST00000287538 PPHLN1Q8NEY8 458 aaKnown RBP12.93□□□□□ -0.34
ZIC3-201ENST00000287538 ACTRT2Q8TDY3 377 aa12.93□□□□□ -0.34
ZIC3-201ENST00000287538 PPP4R1Q8TF05 950 aa12.93□□□□□ -0.34
ZIC3-201ENST00000287538 TMIGD2Q96BF3 282 aa12.93□□□□□ -0.34
ZIC3-201ENST00000287538 PGAP3Q96FM1 320 aaPredicted RBP12.93□□□□□ -0.34
ZIC3-201ENST00000287538 FUBP3Q96I24 572 aaKnown RBP eCLIP12.93□□□□□ -0.34
ZIC3-201ENST00000287538 MRPL9Q9BYD2 267 aaKnown RBP12.93□□□□□ -0.34
ZIC3-201ENST00000287538 SMG9Q9H0W8 520 aaKnown RBP12.93□□□□□ -0.34
ZIC3-201ENST00000287538 PLGRKTQ9HBL7 147 aa12.93□□□□□ -0.34
ZIC3-201ENST00000287538 CYP4F12Q9HCS2 524 aa12.93□□□□□ -0.34
ZIC3-201ENST00000287538 RAB26Q9ULW5 256 aa12.93□□□□□ -0.34
ZIC3-201ENST00000287538 TMEM247A6NEH6 219 aa12.93□□□□□ -0.34
ZIC3-201ENST00000287538 AURKAO14965 403 aa12.93□□□□□ -0.34
ZIC3-201ENST00000287538 GRM3Q14832 879 aa12.93□□□□□ -0.34
ZIC3-201ENST00000287538 POTEHQ6S545 545 aa12.93□□□□□ -0.34
ZIC3-201ENST00000287538 KBTBD6Q86V97 674 aa12.93□□□□□ -0.34
ZIC3-201ENST00000287538 C10orf107Q8IVU9 208 aa12.93□□□□□ -0.34
ZIC3-201ENST00000287538 FBXW8Q8N3Y1 598 aa12.93□□□□□ -0.34
ZIC3-201ENST00000287538 BTN2A3PQ96KV6 586 aa12.93□□□□□ -0.34
ZIC3-201ENST00000287538 C8orf48Q96LL4 319 aa12.93□□□□□ -0.34
ZIC3-201ENST00000287538 CCT7Q99832 543 aa12.93□□□□□ -0.34
ZIC3-201ENST00000287538 PSMD13Q9UNM6 376 aa12.93□□□□□ -0.34
ZIC3-201ENST00000287538 SQORQ9Y6N5 450 aa12.93□□□□□ -0.34
ZIC3-201ENST00000287538 HOXA2O43364 376 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 KLHL2O95198 593 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 COL6A2P12110 1019 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 NCF2P19878 526 aaPredicted RBP12.92□□□□□ -0.34
ZIC3-201ENST00000287538 TACR2P21452 398 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 CORO1AP31146 461 aaKnown RBP12.92□□□□□ -0.34
ZIC3-201ENST00000287538 SERPINB9P50453 376 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 ELAVL2Q12926 359 aaKnown RBP12.92□□□□□ -0.34
ZIC3-201ENST00000287538 WDR75Q8IWA0 830 aaKnown RBP12.92□□□□□ -0.34
ZIC3-201ENST00000287538 ALDH16A1Q8IZ83 802 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 ARL14EPQ8N8R7 260 aaPredicted RBP12.92□□□□□ -0.34
ZIC3-201ENST00000287538 MOCS1Q9NZB8 636 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 DNAJC16Q9Y2G8 782 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 KNL1Q8NG31 2342 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 UBA6A0AVT1 1052 aaPredicted RBP12.92□□□□□ -0.34
ZIC3-201ENST00000287538 FGF10O15520 208 aaPredicted RBP12.92□□□□□ -0.34
ZIC3-201ENST00000287538 ITM2AO43736 263 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 URODP06132 367 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 ITGAXP20702 1163 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 CCNCP24863 283 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 RENBPP51606 427 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 APOFQ13790 326 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 VEPH1Q14D04 833 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 HECTD3Q5T447 861 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 ZNF697Q5TEC3 545 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 BORAQ6PGQ7 559 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 WBP2Q969T9 261 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 VPS39Q96JC1 886 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 TM6SF2Q9BZW4 377 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 SPATA7Q9P0W8 599 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 RUVBL2Q9Y230 463 aaKnown RBP12.92□□□□□ -0.34
ZIC3-201ENST00000287538 DOCK6Q96HP0 2047 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 SCN5AQ14524 2016 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 KANSL1LA0AUZ9 987 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 ZNF487B1APH4 448 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 H0Y626 953 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 SIN3BO75182 1162 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 IDO1P14902 403 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 FGFR3P22607 806 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 HALP42357 657 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 CCR10P46092 362 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 HCAR3P49019 387 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 GEMP55040 296 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 SMAD3P84022 425 aaKnown RBP12.92□□□□□ -0.34
ZIC3-201ENST00000287538 CYP4F8P98187 520 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 ANO4Q32M45 955 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 ANKDD1AQ495B1 522 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 VWA5B1Q5TIE3 1220 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 TMEM53Q6P2H8 277 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 SLC15A3Q8IY34 581 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 KCTD4Q8WVF5 259 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 IGSF21Q96ID5 467 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 RNF38Q9H0F5 515 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 ATP13A1Q9HD20 1204 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 MAN1C1Q9NR34 630 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 SELENONQ9NZV5 590 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 SIRPGQ9P1W8 387 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 DNMT3LQ9UJW3 386 aa12.92□□□□□ -0.34
ZIC3-201ENST00000287538 ZNF236Q9UL36 1845 aa12.91□□□□□ -0.34
ZIC3-201ENST00000287538 GON4LQ3T8J9 2241 aa12.91□□□□□ -0.34
ZIC3-201ENST00000287538 GOLGA8QA0A0J9YX86 632 aa12.91□□□□□ -0.34
ZIC3-201ENST00000287538 GOLGA8OA6NCC3 632 aa12.91□□□□□ -0.34
ZIC3-201ENST00000287538 GOLGA8NF8WBI6 632 aa12.91□□□□□ -0.34
ZIC3-201ENST00000287538 C2P06681 752 aa12.91□□□□□ -0.34
ZIC3-201ENST00000287538 MRPS22P82650 360 aaKnown RBP12.91□□□□□ -0.34
ZIC3-201ENST00000287538 RELAQ04206 551 aa12.91□□□□□ -0.34
ZIC3-201ENST00000287538 SPANXN3Q5MJ09 141 aa12.91□□□□□ -0.34
ZIC3-201ENST00000287538 ZNF558Q96NG5 402 aa12.91□□□□□ -0.34
ZIC3-201ENST00000287538 SLC22A12Q96S37 553 aa12.91□□□□□ -0.34
ZIC3-201ENST00000287538 IL22Q9GZX6 179 aa12.91□□□□□ -0.34
ZIC3-201ENST00000287538 COPS7BQ9H9Q2 264 aaPredicted RBP12.91□□□□□ -0.34
ZIC3-201ENST00000287538 PRM3Q9NNZ6 103 aa12.91□□□□□ -0.34
ZIC3-201ENST00000287538 BPIFA1Q9NP55 256 aa12.91□□□□□ -0.34
ZIC3-201ENST00000287538 PNPLA8Q9NP80 782 aa12.91□□□□□ -0.34
ZIC3-201ENST00000287538 C6orf203Q9P0P8 240 aaPredicted RBP12.91□□□□□ -0.34
ZIC3-201ENST00000287538 SORCS3Q9UPU3 1222 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms