RNA–Protein interactions for RNA: ENST00000286349.3

TRIM42-201, Transcript of tripartite motif containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM42, Length 2,539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42-201ENST00000286349 MBD2Q9UBB5 411 aa7.62□□□□□ -1.19
TRIM42-201ENST00000286349 TLR6Q9Y2C9 796 aa7.62□□□□□ -1.19
TRIM42-201ENST00000286349 SNX8Q9Y5X2 465 aa7.62□□□□□ -1.19
TRIM42-201ENST00000286349 FAM237BA0A1B0GVD1 139 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 ARHGAP42A6NI28 874 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 FADS2P1A8MWK0 482 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 CXorf49A8MYA2 514 aaPredicted RBP7.61□□□□□ -1.19
TRIM42-201ENST00000286349 NT5C1B-RDH14C9J2C7 533 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 H7C4K7 107 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 GOLGA8RI6L899 631 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 KCNK1O00180 336 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 C2CD2LO14523 706 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 CACNG3O60359 315 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 GLRA3O75311 464 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 RFPL1O75677 317 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 POP4O95707 220 aaKnown RBP7.61□□□□□ -1.19
TRIM42-201ENST00000286349 KRT6AP02538 564 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 KRT6BP04259 564 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 ATP5BP06576 529 aaKnown RBP7.61□□□□□ -1.19
TRIM42-201ENST00000286349 GALTP07902 379 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 ALOX5P09917 674 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 CSH1P0DML2 217 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 CSH2P0DML3 217 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 GP5P40197 560 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 HADHAP40939 763 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 SERPINB4P48594 390 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 SLC11A1P49279 550 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 RASSF2P50749 326 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 SESN2P58004 480 aaPredicted RBP7.61□□□□□ -1.19
TRIM42-201ENST00000286349 TMPRSS15P98073 1019 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 RELAQ04206 551 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 CDH17Q12864 832 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 ALFQ53S48 1182 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 MANEALQ5VSG8 457 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 RNF220Q5VTB9 566 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 KCTD11Q693B1 232 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 RWDD4Q6NW29 188 aaKnown RBP7.61□□□□□ -1.19
TRIM42-201ENST00000286349 OTOAQ7RTW8 1153 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 TMEM135Q86UB9 458 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 GATAD2AQ86YP4 633 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.61□□□□□ -1.19
TRIM42-201ENST00000286349 SYTL1Q8IYJ3 562 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 ATPAF2Q8N5M1 289 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 CCDC33Q8N5R6 958 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 NATD1Q8N6N6 113 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 NPWQ8N729 165 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 DNAAF3Q8N9W5 541 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 DDHD1Q8NEL9 900 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 STON2Q8WXE9 905 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 FAM111AQ96PZ2 611 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 TMEM209Q96SK2 561 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 TMEM175Q9BSA9 504 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 TSSK1BQ9BXA7 367 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 IFT22Q9H7X7 185 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 FANCEQ9HB96 536 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 SLC17A7Q9P2U7 560 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 DCDC2Q9UHG0 476 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 PNMA8BQ9ULN7 279 aaPredicted RBP7.61□□□□□ -1.19
TRIM42-201ENST00000286349 INSL6Q9Y581 213 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.61□□□□□ -1.19
TRIM42-201ENST00000286349 KCNU1A8MYU2 1149 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 I6L893 689 aaPredicted RBP7.61□□□□□ -1.19
TRIM42-201ENST00000286349 FBP2O00757 339 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 HGSO14964 777 aaPredicted RBP7.61□□□□□ -1.19
TRIM42-201ENST00000286349 ZBTB24O43167 697 aaPredicted RBP7.61□□□□□ -1.19
TRIM42-201ENST00000286349 TLL1O43897 1013 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 PAGE1O75459 146 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 UBOX5O94941 541 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 EFEMP2O95967 443 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 NPPAP01160 153 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 NQO1P15559 274 aaKnown RBP7.61□□□□□ -1.19
TRIM42-201ENST00000286349 POLR2CP19387 275 aaPredicted RBP7.61□□□□□ -1.19
TRIM42-201ENST00000286349 IFNA8P32881 189 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 GRIA1P42261 906 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 MRPL58Q14197 206 aaKnown RBP7.61□□□□□ -1.19
TRIM42-201ENST00000286349 CNPY1Q3B7I2 92 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 FAM122CQ6P4D5 195 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 TRMT10BQ6PF06 316 aaKnown RBP7.61□□□□□ -1.19
TRIM42-201ENST00000286349 SCN4BQ8IWT1 228 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 CMTR2Q8IYT2 770 aaKnown RBP7.61□□□□□ -1.19
TRIM42-201ENST00000286349 TDHQ8IZJ6 230 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 ZNF276Q8N554 614 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 SCAMP5Q8TAC9 235 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 SPPL2BQ8TCT7 592 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 PTCD2Q8WV60 388 aaKnown RBP7.61□□□□□ -1.19
TRIM42-201ENST00000286349 ATP6V1E2Q96A05 226 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 CERS2Q96G23 380 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 METTL2AQ96IZ6 378 aaKnown RBP7.61□□□□□ -1.19
TRIM42-201ENST00000286349 CNDP1Q96KN2 507 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 GBP5Q96PP8 586 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 YME1L1Q96TA2 773 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 KLF6Q99612 283 aaPredicted RBP7.61□□□□□ -1.19
TRIM42-201ENST00000286349 ARNT2Q9HBZ2 717 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 SMYD2Q9NRG4 433 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 SYBUQ9NX95 663 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 ABI2Q9NYB9 513 aaPredicted RBP7.61□□□□□ -1.19
TRIM42-201ENST00000286349 IL37Q9NZH6 218 aa7.61□□□□□ -1.19
TRIM42-201ENST00000286349 COLQQ9Y215 455 aaPredicted RBP7.61□□□□□ -1.19
TRIM42-201ENST00000286349 MTO1Q9Y2Z2 717 aaKnown RBP7.61□□□□□ -1.19
TRIM42-201ENST00000286349 CHD7Q9P2D1 2997 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms