RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 CHRNGP07510 517 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 MTHFD1P11586 935 aaKnown RBP4.08□□□□□ -1.76
SCN3A-201ENST00000283254 BGNP21810 368 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 BDNFP23560 247 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 GRSF1Q12849 480 aaKnown RBP eCLIP4.08□□□□□ -1.76
SCN3A-201ENST00000283254 FIP1L1Q6UN15 594 aaKnown RBP4.08□□□□□ -1.76
SCN3A-201ENST00000283254 PSTKQ8IV42 348 aaKnown RBP4.08□□□□□ -1.76
SCN3A-201ENST00000283254 PTGR2Q8N8N7 351 aaPredicted RBP4.08□□□□□ -1.76
SCN3A-201ENST00000283254 UXS1Q8NBZ7 420 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 CCDC54Q8NEL0 328 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 TSTD1Q8NFU3 115 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 PJA1Q8NG27 643 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 ADAMTS15Q8TE58 950 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 MNTQ99583 582 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 EBNA1BP2Q99848 306 aaKnown RBP4.08□□□□□ -1.76
SCN3A-201ENST00000283254 TDRD1Q9BXT4 1180 aaKnown RBP4.08□□□□□ -1.76
SCN3A-201ENST00000283254 GLIS2Q9BZE0 524 aaPredicted RBP4.08□□□□□ -1.76
SCN3A-201ENST00000283254 ALG9Q9H6U8 611 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 CDH7Q9ULB5 785 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 PCDHB1Q9Y5F3 818 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 ZNF318Q5VUA4 2279 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 PIGBOS1A0A0B4J2F0 54 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 SIGLEC16A6NMB1 481 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 SRRM3A6NNA2 597 aaPredicted RBP4.08□□□□□ -1.76
SCN3A-201ENST00000283254 RHPN2P1A8MT19 583 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 TRAFD1O14545 582 aaPredicted RBP4.08□□□□□ -1.76
SCN3A-201ENST00000283254 KMOO15229 486 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 ERAL1O75616 437 aaKnown RBP4.08□□□□□ -1.76
SCN3A-201ENST00000283254 APOC1P02654 83 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 PRKAR1AP10644 381 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 PECAM1P16284 738 aaPredicted RBP4.08□□□□□ -1.76
SCN3A-201ENST00000283254 KIR3DL1P43629 444 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 ERFP50548 548 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 LPIN1Q14693 890 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 PUS10Q3MIT2 529 aaKnown RBP4.08□□□□□ -1.76
SCN3A-201ENST00000283254 ZC3H12AQ5D1E8 599 aaKnown RBP4.08□□□□□ -1.76
SCN3A-201ENST00000283254 CELF3Q5SZQ8 465 aaKnown RBP4.08□□□□□ -1.76
SCN3A-201ENST00000283254 OTUD3Q5T2D3 398 aaPredicted RBP4.08□□□□□ -1.76
SCN3A-201ENST00000283254 FOXR1Q6PIV2 292 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 RAD9BQ6WBX8 426 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 BNIPLQ7Z465 357 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 FAM98AQ8NCA5 519 aaKnown RBP4.08□□□□□ -1.76
SCN3A-201ENST00000283254 PIH1D2Q8WWB5 315 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 FATE1Q969F0 183 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 CAVIN3Q969G5 261 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 RFKQ969G6 155 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 COX4I2Q96KJ9 171 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 ZIM3Q96PE6 472 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 PANX1Q96RD7 426 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 HAPLN3Q96S86 360 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 RHOBTB2Q9BYZ6 727 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 POMKQ9H5K3 350 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 INTS10Q9NVR2 710 aaKnown RBP4.08□□□□□ -1.76
SCN3A-201ENST00000283254 MORF4L1Q9UBU8 362 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 ING4Q9UNL4 249 aa4.08□□□□□ -1.76
SCN3A-201ENST00000283254 SAMD4AQ9UPU9 718 aaKnown RBP4.08□□□□□ -1.76
SCN3A-201ENST00000283254 ADAMDEC1O15204 470 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 STK16O75716 305 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 SGPL1O95470 568 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 SERPINA3P01011 423 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 TRBC1P01850 177 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 ADRA1DP25100 572 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 ALDH4A1P30038 563 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 MIPP30301 263 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 ADSLP30566 484 aaPredicted RBP4.07□□□□□ -1.76
SCN3A-201ENST00000283254 PIK3CBP42338 1070 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 MATKP42679 507 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 MTTPP55157 894 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 CASP6P55212 293 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 YBEYP58557 167 aaPredicted RBP4.07□□□□□ -1.76
SCN3A-201ENST00000283254 EIF5AP63241 154 aaKnown RBP4.07□□□□□ -1.76
SCN3A-201ENST00000283254 SLC20A2Q08357 652 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 FCHO2Q0JRZ9 810 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 PTPRNQ16849 979 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 PAPD7Q5XG87 772 aaKnown RBP4.07□□□□□ -1.76
SCN3A-201ENST00000283254 WSCD1Q658N2 575 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 PYHIN1Q6K0P9 492 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 CXCL17Q6UXB2 119 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 SCUBE3Q8IX30 993 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 PPTC7Q8NI37 304 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 ZNF398Q8TD17 642 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 WFIKKN2Q8TEU8 576 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 LCN9Q8WX39 176 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 SLC22A18Q96BI1 424 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 PHF21BQ96EK2 531 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 WDR18Q9BV38 432 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 CAB39LQ9H9S4 337 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 PCDH18Q9HCL0 1135 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 IMP3Q9NV31 184 aaKnown RBP4.07□□□□□ -1.76
SCN3A-201ENST00000283254 GGA2Q9UJY4 613 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 SNX7Q9UNH6 387 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 PCDHB11Q9Y5F2 797 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 SPIN1Q9Y657 262 aaPredicted RBP4.07□□□□□ -1.76
SCN3A-201ENST00000283254 PRORSD1PA6NEY8 169 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 OR5F1O95221 314 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 SAGP10523 405 aaPredicted RBP4.07□□□□□ -1.76
SCN3A-201ENST00000283254 EPORP19235 508 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 SHMT1P34896 483 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 AVPR1BP47901 424 aa4.07□□□□□ -1.76
SCN3A-201ENST00000283254 CASP4P49662 377 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms