RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 RFTN1Q14699 578 aaPredicted RBP21.04■□□□□ 0.96
YBX3-202ENST00000279550 CENPLQ8N0S6 344 aaPredicted RBP21.04■□□□□ 0.96
YBX3-202ENST00000279550 LRRC3BQ96PB8 259 aa21.04■□□□□ 0.96
YBX3-202ENST00000279550 SMIM14Q96QK8 99 aa21.04■□□□□ 0.96
YBX3-202ENST00000279550 THAP1Q9NVV9 213 aa21.04■□□□□ 0.96
YBX3-202ENST00000279550 TLK1Q9UKI8 766 aa21.04■□□□□ 0.96
YBX3-202ENST00000279550 SPO11Q9Y5K1 396 aa21.04■□□□□ 0.96
YBX3-202ENST00000279550 SLC7A4O43246 635 aa21.04■□□□□ 0.96
YBX3-202ENST00000279550 CYBBP04839 570 aa21.04■□□□□ 0.96
YBX3-202ENST00000279550 SBK3P0C264 359 aa21.04■□□□□ 0.96
YBX3-202ENST00000279550 KITP10721 976 aa21.04■□□□□ 0.96
YBX3-202ENST00000279550 SCNN1BP51168 640 aa21.04■□□□□ 0.96
YBX3-202ENST00000279550 ACVR1Q04771 509 aa21.04■□□□□ 0.96
YBX3-202ENST00000279550 DLG1Q12959 904 aa21.04■□□□□ 0.96
YBX3-202ENST00000279550 CDH18Q13634 790 aa21.04■□□□□ 0.96
YBX3-202ENST00000279550 SLC14A2Q15849 920 aa21.04■□□□□ 0.96
YBX3-202ENST00000279550 KIAA0408Q6ZU52 694 aa21.04■□□□□ 0.96
YBX3-202ENST00000279550 PTAR1Q7Z6K3 402 aaPredicted RBP21.04■□□□□ 0.96
YBX3-202ENST00000279550 LDB1Q86U70 411 aaPredicted RBP21.04■□□□□ 0.96
YBX3-202ENST00000279550 CRLF3Q8IUI8 442 aa21.04■□□□□ 0.96
YBX3-202ENST00000279550 GPATCH11Q8N954 259 aa21.04■□□□□ 0.96
YBX3-202ENST00000279550 OR6Y1Q8NGX8 325 aa21.04■□□□□ 0.96
YBX3-202ENST00000279550 SKA1Q96BD8 255 aa21.04■□□□□ 0.96
YBX3-202ENST00000279550 OTUB2Q96DC9 234 aa21.04■□□□□ 0.96
YBX3-202ENST00000279550 RSPRY1Q96DX4 576 aa21.04■□□□□ 0.96
YBX3-202ENST00000279550 LRCH3Q96II8 777 aa21.04■□□□□ 0.96
YBX3-202ENST00000279550 DNAJC1Q96KC8 554 aaKnown RBP21.04■□□□□ 0.96
YBX3-202ENST00000279550 MSLNLQ96KJ4 702 aa21.04■□□□□ 0.96
YBX3-202ENST00000279550 LINC00597Q9H2U6 94 aa21.04■□□□□ 0.96
YBX3-202ENST00000279550 MFSD1Q9H3U5 465 aa21.04■□□□□ 0.96
YBX3-202ENST00000279550 SUDS3Q9H7L9 328 aaPredicted RBP21.04■□□□□ 0.96
YBX3-202ENST00000279550 NMRAL1Q9HBL8 299 aa21.04■□□□□ 0.96
YBX3-202ENST00000279550 PLK2Q9NYY3 685 aa21.04■□□□□ 0.96
YBX3-202ENST00000279550 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP21.04■□□□□ 0.96
YBX3-202ENST00000279550 CDH7Q9ULB5 785 aa21.04■□□□□ 0.96
YBX3-202ENST00000279550 OR51B4Q9Y5P0 310 aa21.04■□□□□ 0.96
YBX3-202ENST00000279550 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.03■□□□□ 0.96
YBX3-202ENST00000279550 INSIG1O15503 277 aa21.03■□□□□ 0.96
YBX3-202ENST00000279550 DNAJC6O75061 913 aa21.03■□□□□ 0.96
YBX3-202ENST00000279550 PRLP01236 227 aa21.03■□□□□ 0.96
YBX3-202ENST00000279550 RALBP11234 206 aa21.03■□□□□ 0.96
YBX3-202ENST00000279550 VIPR2P41587 438 aa21.03■□□□□ 0.96
YBX3-202ENST00000279550 SLC1A6P48664 564 aa21.03■□□□□ 0.96
YBX3-202ENST00000279550 RAB10P61026 200 aa21.03■□□□□ 0.96
YBX3-202ENST00000279550 ITGA9Q13797 1035 aa21.03■□□□□ 0.96
YBX3-202ENST00000279550 TAF1BQ53T94 588 aaPredicted RBP21.03■□□□□ 0.96
YBX3-202ENST00000279550 ZNF783Q6ZMS7 281 aa21.03■□□□□ 0.96
YBX3-202ENST00000279550 MFN1Q8IWA4 741 aa21.03■□□□□ 0.96
YBX3-202ENST00000279550 TMEM151AQ8N4L1 468 aa21.03■□□□□ 0.96
YBX3-202ENST00000279550 KIAA1958Q8N8K9 716 aa21.03■□□□□ 0.96
YBX3-202ENST00000279550 OR6P1Q8NGX9 317 aa21.03■□□□□ 0.96
YBX3-202ENST00000279550 TBATAQ96M53 351 aa21.03■□□□□ 0.96
YBX3-202ENST00000279550 RIPOR3Q96MK2 946 aa21.03■□□□□ 0.96
YBX3-202ENST00000279550 SORT1Q99523 831 aa21.03■□□□□ 0.96
YBX3-202ENST00000279550 NDNQ99608 321 aa21.03■□□□□ 0.96
YBX3-202ENST00000279550 TRPV4Q9HBA0 871 aa21.03■□□□□ 0.96
YBX3-202ENST00000279550 SCUBE2Q9NQ36 999 aa21.03■□□□□ 0.96
YBX3-202ENST00000279550 LHX3Q9UBR4 397 aa21.03■□□□□ 0.96
YBX3-202ENST00000279550 ZFP69BQ9UJL9 534 aa21.03■□□□□ 0.96
YBX3-202ENST00000279550 WNT6Q9Y6F9 365 aa21.03■□□□□ 0.96
YBX3-202ENST00000279550 SLC9A3R1O14745 358 aaPredicted RBP21.02■□□□□ 0.96
YBX3-202ENST00000279550 TMCC1O94876 653 aa21.02■□□□□ 0.96
YBX3-202ENST00000279550 T-ENOLP0DO92 83 aa21.02■□□□□ 0.96
YBX3-202ENST00000279550 SERPINB3P29508 390 aa21.02■□□□□ 0.96
YBX3-202ENST00000279550 POLD2P49005 469 aa21.02■□□□□ 0.96
YBX3-202ENST00000279550 SLC12A1Q13621 1099 aa21.02■□□□□ 0.96
YBX3-202ENST00000279550 NAPRTQ6XQN6 538 aa21.02■□□□□ 0.96
YBX3-202ENST00000279550 PACS2Q86VP3 889 aa21.02■□□□□ 0.96
YBX3-202ENST00000279550 TMEM25Q86YD3 366 aa21.02■□□□□ 0.96
YBX3-202ENST00000279550 OR13C4Q8NGS5 318 aa21.02■□□□□ 0.96
YBX3-202ENST00000279550 ALG14Q96F25 216 aa21.02■□□□□ 0.96
YBX3-202ENST00000279550 GPR78Q96P69 363 aa21.02■□□□□ 0.96
YBX3-202ENST00000279550 GAS2L1Q99501 681 aaPredicted RBP21.02■□□□□ 0.96
YBX3-202ENST00000279550 OLFM1Q99784 485 aa21.02■□□□□ 0.96
YBX3-202ENST00000279550 OMDQ99983 421 aa21.02■□□□□ 0.96
YBX3-202ENST00000279550 SPHK2Q9NRA0 654 aa21.02■□□□□ 0.96
YBX3-202ENST00000279550 CPSF2Q9P2I0 782 aaKnown RBP21.02■□□□□ 0.96
YBX3-202ENST00000279550 RUVBL2Q9Y230 463 aaKnown RBP21.02■□□□□ 0.96
YBX3-202ENST00000279550 DNAJC16Q9Y2G8 782 aa21.02■□□□□ 0.96
YBX3-202ENST00000279550 RASSF9O75901 435 aa21.01■□□□□ 0.95
YBX3-202ENST00000279550 CSKP41240 450 aa21.01■□□□□ 0.95
YBX3-202ENST00000279550 GLRBP48167 497 aa21.01■□□□□ 0.95
YBX3-202ENST00000279550 LEPRP48357 1165 aaKnown RBP21.01■□□□□ 0.95
YBX3-202ENST00000279550 KCNJ2P63252 427 aa21.01■□□□□ 0.95
YBX3-202ENST00000279550 ASRGL1Q7L266 308 aa21.01■□□□□ 0.95
YBX3-202ENST00000279550 CLNKQ7Z7G1 428 aa21.01■□□□□ 0.95
YBX3-202ENST00000279550 TBC1D1Q86TI0 1168 aaPredicted RBP21.01■□□□□ 0.95
YBX3-202ENST00000279550 CILP2Q8IUL8 1156 aa21.01■□□□□ 0.95
YBX3-202ENST00000279550 ADGRG2Q8IZP9 1017 aa21.01■□□□□ 0.95
YBX3-202ENST00000279550 SPATA6LQ8N4H0 392 aa21.01■□□□□ 0.95
YBX3-202ENST00000279550 KIF2BQ8N4N8 673 aa21.01■□□□□ 0.95
YBX3-202ENST00000279550 CALML6Q8TD86 181 aa21.01■□□□□ 0.95
YBX3-202ENST00000279550 IRF7Q92985 503 aa21.01■□□□□ 0.95
YBX3-202ENST00000279550 NUDCD1Q96RS6 583 aa21.01■□□□□ 0.95
YBX3-202ENST00000279550 FEM1AQ9BSK4 669 aa21.01■□□□□ 0.95
YBX3-202ENST00000279550 KCNK4Q9NYG8 393 aa21.01■□□□□ 0.95
YBX3-202ENST00000279550 CCDC162PA2VCL2 907 aa21.01■□□□□ 0.95
YBX3-202ENST00000279550 TK2O00142 265 aa21.01■□□□□ 0.95
YBX3-202ENST00000279550 UNC5CO95185 931 aa21.01■□□□□ 0.95
YBX3-202ENST00000279550 S1PR4O95977 384 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms