RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 DSEQ9UL01 958 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 SARDHQ9UL12 918 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 MAGED2Q9UNF1 606 aaPredicted RBP12.98□□□□□ -0.33
C9orf3-201ENST00000277198 ATG2AQ2TAZ0 1938 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 C5orf67F2Z3F1 127 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 DFFAO00273 331 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 SDHDO14521 159 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 B4GALT3O60512 393 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 PAPSS2O95340 614 aaPredicted RBP12.98□□□□□ -0.33
C9orf3-201ENST00000277198 CCR1P32246 355 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 IRS1P35568 1242 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 SLC1A2P43004 574 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 CLCN5P51795 746 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 TAS2R39P59534 338 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 MPP1Q00013 466 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 CTBP1Q13363 440 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 SQLEQ14534 574 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 PPP2R5DQ14738 602 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 TLR1Q15399 786 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 UPP1Q16831 310 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 USP41Q3LFD5 358 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 IRAK1BP1Q5VVH5 260 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 NEPROQ6NW34 567 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 KLC3Q6P597 504 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 FBXL19Q6PCT2 694 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 TRIM67Q6ZTA4 783 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 SLC22A9Q8IVM8 553 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 DENND6AQ8IWF6 608 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 ALDH16A1Q8IZ83 802 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 DGCR14Q96DF8 476 aaKnown RBP12.98□□□□□ -0.33
C9orf3-201ENST00000277198 GCNAQ96QF7 691 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 GAD1Q99259 594 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 FICDQ9BVA6 458 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 FSD1LQ9BXM9 530 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 ZNF696Q9H7X3 374 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 MEAF6Q9HAF1 191 aa12.98□□□□□ -0.33
C9orf3-201ENST00000277198 ARHGEF37A1IGU5 675 aa12.97□□□□□ -0.33
C9orf3-201ENST00000277198 HEATR9A2RTY3 570 aa12.97□□□□□ -0.33
C9orf3-201ENST00000277198 WASH4PA8MWX3 477 aa12.97□□□□□ -0.33
C9orf3-201ENST00000277198 TXNDC9O14530 226 aa12.97□□□□□ -0.33
C9orf3-201ENST00000277198 RTN3O95197 1032 aaPredicted RBP12.97□□□□□ -0.33
C9orf3-201ENST00000277198 TNFAIP8O95379 198 aa12.97□□□□□ -0.33
C9orf3-201ENST00000277198 MT-CYBP00156 380 aaPredicted RBP12.97□□□□□ -0.33
C9orf3-201ENST00000277198 F7P08709 466 aaPredicted RBP12.97□□□□□ -0.33
C9orf3-201ENST00000277198 ENO3P13929 434 aaPredicted RBP12.97□□□□□ -0.33
C9orf3-201ENST00000277198 CPB1P15086 417 aa12.97□□□□□ -0.33
C9orf3-201ENST00000277198 AVPR1AP37288 418 aa12.97□□□□□ -0.33
C9orf3-201ENST00000277198 LEPRP48357 1165 aaKnown RBP12.97□□□□□ -0.33
C9orf3-201ENST00000277198 INHBCP55103 352 aa12.97□□□□□ -0.33
C9orf3-201ENST00000277198 MRPS22P82650 360 aaKnown RBP12.97□□□□□ -0.33
C9orf3-201ENST00000277198 PFKPQ01813 784 aa12.97□□□□□ -0.33
C9orf3-201ENST00000277198 TRAP1Q12931 704 aaKnown RBP12.97□□□□□ -0.33
C9orf3-201ENST00000277198 ADRM1Q16186 407 aa12.97□□□□□ -0.33
C9orf3-201ENST00000277198 SPOUT1Q5T280 376 aaKnown RBP12.97□□□□□ -0.33
C9orf3-201ENST00000277198 MFSD6LQ8IWD5 586 aa12.97□□□□□ -0.33
C9orf3-201ENST00000277198 CCNYL1Q8N7R7 359 aa12.97□□□□□ -0.33
C9orf3-201ENST00000277198 BHLHE22Q8NFJ8 381 aaPredicted RBP12.97□□□□□ -0.33
C9orf3-201ENST00000277198 NAT14Q8WUY8 206 aa12.97□□□□□ -0.33
C9orf3-201ENST00000277198 MRPL38Q96DV4 380 aaKnown RBP12.97□□□□□ -0.33
C9orf3-201ENST00000277198 DUS3LQ96G46 650 aaKnown RBP12.97□□□□□ -0.33
C9orf3-201ENST00000277198 ELMO2Q96JJ3 720 aa12.97□□□□□ -0.33
C9orf3-201ENST00000277198 SAMD11Q96NU1 681 aa12.97□□□□□ -0.33
C9orf3-201ENST00000277198 SMOC2Q9H3U7 446 aa12.97□□□□□ -0.33
C9orf3-201ENST00000277198 VPS45Q9NRW7 570 aa12.97□□□□□ -0.33
C9orf3-201ENST00000277198 PADI4Q9UM07 663 aa12.97□□□□□ -0.33
C9orf3-201ENST00000277198 SNX10Q9Y5X0 201 aa12.97□□□□□ -0.33
C9orf3-201ENST00000277198 IPO13O94829 963 aaKnown RBP12.96□□□□□ -0.33
C9orf3-201ENST00000277198 CCR10P46092 362 aa12.96□□□□□ -0.33
C9orf3-201ENST00000277198 RAB27AP51159 221 aa12.96□□□□□ -0.33
C9orf3-201ENST00000277198 MS4A2Q01362 244 aa12.96□□□□□ -0.33
C9orf3-201ENST00000277198 LSAMPQ13449 338 aa12.96□□□□□ -0.33
C9orf3-201ENST00000277198 TRIM25Q14258 630 aaKnown RBP12.96□□□□□ -0.33
C9orf3-201ENST00000277198 PTK2BQ14289 1009 aa12.96□□□□□ -0.33
C9orf3-201ENST00000277198 ACAP2Q15057 778 aa12.96□□□□□ -0.33
C9orf3-201ENST00000277198 PDCD2Q16342 344 aaPredicted RBP12.96□□□□□ -0.33
C9orf3-201ENST00000277198 TCEAL5Q5H9L2 206 aa12.96□□□□□ -0.33
C9orf3-201ENST00000277198 TECRLQ5HYJ1 363 aa12.96□□□□□ -0.33
C9orf3-201ENST00000277198 TMEM198Q66K66 360 aa12.96□□□□□ -0.33
C9orf3-201ENST00000277198 ZNF470Q6ECI4 717 aa12.96□□□□□ -0.33
C9orf3-201ENST00000277198 HACD2Q6Y1H2 254 aa12.96□□□□□ -0.33
C9orf3-201ENST00000277198 AGMOQ6ZNB7 445 aa12.96□□□□□ -0.33
C9orf3-201ENST00000277198 MRPL10Q7Z7H8 261 aaKnown RBP12.96□□□□□ -0.33
C9orf3-201ENST00000277198 TXNDC5Q8NBS9 432 aaKnown RBP12.96□□□□□ -0.33
C9orf3-201ENST00000277198 SPPL2BQ8TCT7 592 aa12.96□□□□□ -0.33
C9orf3-201ENST00000277198 USP33Q8TEY7 942 aa12.96□□□□□ -0.33
C9orf3-201ENST00000277198 HEXDCQ8WVB3 486 aa12.96□□□□□ -0.33
C9orf3-201ENST00000277198 DTNBP1Q96EV8 351 aa12.96□□□□□ -0.33
C9orf3-201ENST00000277198 C1orf74Q96LT6 269 aa12.96□□□□□ -0.33
C9orf3-201ENST00000277198 OMDQ99983 421 aa12.96□□□□□ -0.33
C9orf3-201ENST00000277198 RTP3Q9BQQ7 232 aa12.96□□□□□ -0.33
C9orf3-201ENST00000277198 MRPS26Q9BYN8 205 aaKnown RBP12.96□□□□□ -0.33
C9orf3-201ENST00000277198 SLC39A8Q9C0K1 460 aa12.96□□□□□ -0.33
C9orf3-201ENST00000277198 POMKQ9H5K3 350 aa12.96□□□□□ -0.33
C9orf3-201ENST00000277198 IGSF5Q9NSI5 407 aa12.96□□□□□ -0.33
C9orf3-201ENST00000277198 RBM22Q9NW64 420 aaKnown RBP eCLIP12.96□□□□□ -0.33
C9orf3-201ENST00000277198 OSER1Q9NX31 292 aa12.96□□□□□ -0.33
C9orf3-201ENST00000277198 TIMM13Q9Y5L4 95 aaPredicted RBP12.96□□□□□ -0.33
C9orf3-201ENST00000277198 ARL5CA6NH57 179 aa12.96□□□□□ -0.34
C9orf3-201ENST00000277198 NT5C1B-RDH14C9J2C7 533 aa12.96□□□□□ -0.34
C9orf3-201ENST00000277198 CFLARO15519 480 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms