RNA–Protein interactions for RNA: ENST00000275560.3

SSC4D-201, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSC4D, Length 2,801 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-201ENST00000275560 HDAC11Q96DB2 347 aa18.72■□□□□ 0.59
SSC4D-201ENST00000275560 SNX27Q96L92 541 aa18.72■□□□□ 0.59
SSC4D-201ENST00000275560 TBL1YQ9BQ87 522 aa18.72■□□□□ 0.59
SSC4D-201ENST00000275560 FANCEQ9HB96 536 aa18.72■□□□□ 0.59
SSC4D-201ENST00000275560 FBXO5Q9UKT4 447 aa18.72■□□□□ 0.59
SSC4D-201ENST00000275560 FXYD1O00168 92 aa18.72■□□□□ 0.59
SSC4D-201ENST00000275560 CYP2C9P11712 490 aa18.72■□□□□ 0.59
SSC4D-201ENST00000275560 IL10P22301 178 aa18.72■□□□□ 0.59
SSC4D-201ENST00000275560 MAP4P27816 1152 aaKnown RBP18.72■□□□□ 0.59
SSC4D-201ENST00000275560 SCNN1AP37088 669 aa18.72■□□□□ 0.59
SSC4D-201ENST00000275560 PPIL2Q13356 520 aa18.72■□□□□ 0.59
SSC4D-201ENST00000275560 OTUD3Q5T2D3 398 aaPredicted RBP18.72■□□□□ 0.59
SSC4D-201ENST00000275560 DENND5AQ6IQ26 1287 aa18.72■□□□□ 0.59
SSC4D-201ENST00000275560 ABRAXAS1Q6UWZ7 409 aa18.72■□□□□ 0.59
SSC4D-201ENST00000275560 PAQR9Q6ZVX9 377 aa18.72■□□□□ 0.59
SSC4D-201ENST00000275560 BNIPLQ7Z465 357 aa18.72■□□□□ 0.59
SSC4D-201ENST00000275560 SNX29P2Q8IUI4 249 aa18.72■□□□□ 0.59
SSC4D-201ENST00000275560 B3GALNT2Q8NCR0 500 aa18.72■□□□□ 0.59
SSC4D-201ENST00000275560 SMG8Q8ND04 991 aaKnown RBP18.72■□□□□ 0.59
SSC4D-201ENST00000275560 BEST2Q8NFU1 509 aa18.72■□□□□ 0.59
SSC4D-201ENST00000275560 SEPHS2Q99611 448 aa18.72■□□□□ 0.59
SSC4D-201ENST00000275560 YIPF2Q9BWQ6 316 aa18.72■□□□□ 0.59
SSC4D-201ENST00000275560 PLEKHA5Q9HAU0 1116 aa18.72■□□□□ 0.59
SSC4D-201ENST00000275560 LTB4R2Q9NPC1 389 aa18.72■□□□□ 0.59
SSC4D-201ENST00000275560 TBC1D13Q9NVG8 400 aa18.72■□□□□ 0.59
SSC4D-201ENST00000275560 NSMCE4AQ9NXX6 385 aa18.72■□□□□ 0.59
SSC4D-201ENST00000275560 TTC36A6NLP5 189 aa18.71■□□□□ 0.59
SSC4D-201ENST00000275560 LRIG2O94898 1065 aa18.71■□□□□ 0.59
SSC4D-201ENST00000275560 LGALS2P05162 132 aa18.71■□□□□ 0.59
SSC4D-201ENST00000275560 HOXA11P31270 313 aaPredicted RBP18.71■□□□□ 0.59
SSC4D-201ENST00000275560 DNAJB13P59910 316 aa18.71■□□□□ 0.59
SSC4D-201ENST00000275560 GALNT2Q10471 571 aa18.71■□□□□ 0.59
SSC4D-201ENST00000275560 PCSK7Q16549 785 aa18.71■□□□□ 0.59
SSC4D-201ENST00000275560 UGP2Q16851 508 aa18.71■□□□□ 0.59
SSC4D-201ENST00000275560 GEN1Q17RS7 908 aa18.71■□□□□ 0.59
SSC4D-201ENST00000275560 GADL1Q6ZQY3 521 aa18.71■□□□□ 0.59
SSC4D-201ENST00000275560 PDZD4Q76G19 769 aaPredicted RBP18.71■□□□□ 0.59
SSC4D-201ENST00000275560 PIM3Q86V86 326 aa18.71■□□□□ 0.59
SSC4D-201ENST00000275560 SEPT8Q92599 483 aa18.71■□□□□ 0.59
SSC4D-201ENST00000275560 C19orf60Q96EN9 201 aa18.71■□□□□ 0.59
SSC4D-201ENST00000275560 DOK1Q99704 481 aa18.71■□□□□ 0.59
SSC4D-201ENST00000275560 MED10Q9BTT4 135 aa18.71■□□□□ 0.59
SSC4D-201ENST00000275560 OR12D3Q9UGF7 316 aa18.71■□□□□ 0.59
SSC4D-201ENST00000275560 PTBP2Q9UKA9 531 aaKnown RBP18.71■□□□□ 0.59
SSC4D-201ENST00000275560 TCAF1Q9Y4C2 921 aa18.71■□□□□ 0.59
SSC4D-201ENST00000275560 ZNF701M0R085 212 aaPredicted RBP18.71■□□□□ 0.59
SSC4D-201ENST00000275560 RECQL4O94761 1208 aa18.71■□□□□ 0.59
SSC4D-201ENST00000275560 SIX3O95343 332 aaPredicted RBP18.71■□□□□ 0.59
SSC4D-201ENST00000275560 USP17L7P0C7H9 530 aa18.71■□□□□ 0.59
SSC4D-201ENST00000275560 KPNA1P52294 538 aaPredicted RBP18.71■□□□□ 0.59
SSC4D-201ENST00000275560 STX1BP61266 288 aa18.71■□□□□ 0.59
SSC4D-201ENST00000275560 SOX4Q06945 474 aaPredicted RBP18.71■□□□□ 0.59
SSC4D-201ENST00000275560 BTG3Q14201 252 aaPredicted RBP18.71■□□□□ 0.59
SSC4D-201ENST00000275560 ZBTB6Q15916 424 aa18.71■□□□□ 0.59
SSC4D-201ENST00000275560 RYBPQ8N488 228 aaPredicted RBP18.71■□□□□ 0.59
SSC4D-201ENST00000275560 DHRSXQ8N5I4 330 aa18.71■□□□□ 0.59
SSC4D-201ENST00000275560 STON2Q8WXE9 905 aa18.71■□□□□ 0.59
SSC4D-201ENST00000275560 CENPNQ96H22 339 aaPredicted RBP18.71■□□□□ 0.59
SSC4D-201ENST00000275560 FAM49AQ9H0Q0 323 aaPredicted RBP18.71■□□□□ 0.59
SSC4D-201ENST00000275560 IFT80Q9P2H3 777 aaPredicted RBP18.71■□□□□ 0.59
SSC4D-201ENST00000275560 TRHDEQ9UKU6 1024 aa18.71■□□□□ 0.59
SSC4D-201ENST00000275560 TRIM64A6NGJ6 449 aa18.7■□□□□ 0.58
SSC4D-201ENST00000275560 H3BMM5 538 aa18.7■□□□□ 0.58
SSC4D-201ENST00000275560 INPP5AQ14642 412 aa18.7■□□□□ 0.58
SSC4D-201ENST00000275560 PDCD4Q53EL6 469 aaKnown RBP18.7■□□□□ 0.58
SSC4D-201ENST00000275560 CLEC20AQ6ZU45 233 aa18.7■□□□□ 0.58
SSC4D-201ENST00000275560 VPS33AQ96AX1 596 aa18.7■□□□□ 0.58
SSC4D-201ENST00000275560 ABHD8Q96I13 439 aa18.7■□□□□ 0.58
SSC4D-201ENST00000275560 C9orf16Q9BUW7 83 aa18.7■□□□□ 0.58
SSC4D-201ENST00000275560 DUSP16Q9BY84 665 aa18.7■□□□□ 0.58
SSC4D-201ENST00000275560 SEZ6LQ9BYH1 1024 aa18.7■□□□□ 0.58
SSC4D-201ENST00000275560 EML4Q9HC35 981 aaKnown RBP18.7■□□□□ 0.58
SSC4D-201ENST00000275560 TXNRD2Q9NNW7 524 aa18.7■□□□□ 0.58
SSC4D-201ENST00000275560 TMEM30AQ9NV96 361 aa18.7■□□□□ 0.58
SSC4D-201ENST00000275560 MAGED1Q9Y5V3 778 aaPredicted RBP18.7■□□□□ 0.58
SSC4D-201ENST00000275560 DGKBQ9Y6T7 804 aa18.7■□□□□ 0.58
SSC4D-201ENST00000275560 PLXNA1Q9UIW2 1896 aa18.7■□□□□ 0.58
SSC4D-201ENST00000275560 KPNA6O60684 536 aa18.7■□□□□ 0.58
SSC4D-201ENST00000275560 RASAL1O95294 804 aa18.7■□□□□ 0.58
SSC4D-201ENST00000275560 SLC6A2P23975 617 aa18.7■□□□□ 0.58
SSC4D-201ENST00000275560 OXCT1P55809 520 aa18.7■□□□□ 0.58
SSC4D-201ENST00000275560 GPR158Q5T848 1215 aa18.7■□□□□ 0.58
SSC4D-201ENST00000275560 FAM117BQ6P1L5 589 aa18.7■□□□□ 0.58
SSC4D-201ENST00000275560 TMEM207Q6UWW9 146 aa18.7■□□□□ 0.58
SSC4D-201ENST00000275560 CNTN4Q8IWV2 1026 aa18.7■□□□□ 0.58
SSC4D-201ENST00000275560 LINC01465Q8N7H1 131 aa18.7■□□□□ 0.58
SSC4D-201ENST00000275560 APPL2Q8NEU8 664 aa18.7■□□□□ 0.58
SSC4D-201ENST00000275560 DQX1Q8TE96 717 aaKnown RBP18.7■□□□□ 0.58
SSC4D-201ENST00000275560 RSPH1Q8WYR4 309 aa18.7■□□□□ 0.58
SSC4D-201ENST00000275560 CSF3RQ99062 836 aa18.7■□□□□ 0.58
SSC4D-201ENST00000275560 TKTL2Q9H0I9 626 aa18.7■□□□□ 0.58
SSC4D-201ENST00000275560 SIK2Q9H0K1 926 aa18.7■□□□□ 0.58
SSC4D-201ENST00000275560 RNF39Q9H2S5 420 aa18.7■□□□□ 0.58
SSC4D-201ENST00000275560 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.7■□□□□ 0.58
SSC4D-201ENST00000275560 BTRCQ9Y297 605 aa18.7■□□□□ 0.58
SSC4D-201ENST00000275560 LOC285556D6RIA3 1793 aa18.7■□□□□ 0.58
SSC4D-201ENST00000275560 CAPGP40121 348 aa18.69■□□□□ 0.58
SSC4D-201ENST00000275560 CASP2P42575 452 aa18.69■□□□□ 0.58
SSC4D-201ENST00000275560 CXCR3P49682 368 aa18.69■□□□□ 0.58
SSC4D-201ENST00000275560 MYRFLQ96LU7 910 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms