RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 SLC7A2P52569 658 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 INHBEP58166 350 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 NKX2-3Q8TAU0 364 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 LENG1Q96BZ8 264 aaPredicted RBP11.49□□□□□ -0.57
USP53-201ENST00000274030 KLRG1Q96E93 195 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 PTCD3Q96EY7 689 aaKnown RBP11.49□□□□□ -0.57
USP53-201ENST00000274030 GPR20Q99678 358 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 LRMDAQ9H2I8 198 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 GMIPQ9P107 970 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 SAMHD1Q9Y3Z3 626 aaKnown RBP11.49□□□□□ -0.57
USP53-201ENST00000274030 PSMD11O00231 422 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 TRIM38O00635 465 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 ANPEPP15144 967 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 MPSTP25325 297 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 CHN2P52757 468 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 SPIBQ01892 262 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 RHAGQ02094 409 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 TAPT1Q6NXT6 567 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 IRF2BP1Q8IU81 584 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 TSPAN14Q8NG11 270 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 OR4K2Q8NGD2 314 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 OR52L1Q8NGH7 329 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 CSPG4P5Q96PW8 444 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 KCNE2Q9Y6J6 123 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 TBC1D3DA0A087WVF3 549 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 TBC1D3IA0A087WXS9 549 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 TBC1D3EA0A087X179 549 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 TBC1D3KA0A087X1G2 549 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 TBC1D3FA6NER0 549 aaPredicted RBP11.49□□□□□ -0.57
USP53-201ENST00000274030 BTNL10A8MVZ5 291 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 TBC1D3LB9A6J9 549 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 KPNA4O00629 521 aaPredicted RBP11.49□□□□□ -0.57
USP53-201ENST00000274030 MAGEC1O60732 1142 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 TBC1D3HP0C7X1 549 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 GABRB2P47870 512 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 TNK2Q07912 1038 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 PDK3Q15120 406 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 TBC1D3GQ6DHY5 549 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 TBC1D3CQ6IPX1 549 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 ARCQ7LC44 396 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 TBC1D3Q8IZP1 549 aaPredicted RBP11.49□□□□□ -0.57
USP53-201ENST00000274030 ZNF557Q8N988 423 aaPredicted RBP11.49□□□□□ -0.57
USP53-201ENST00000274030 EIF1ADQ8N9N8 165 aaKnown RBP11.49□□□□□ -0.57
USP53-201ENST00000274030 NELL1Q92832 810 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 RPS6KA6Q9UK32 745 aa11.49□□□□□ -0.57
USP53-201ENST00000274030 ZW10O43264 779 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 FGRP09769 529 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 TNFRSF8P28908 595 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 ADRA1BP35368 520 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 ITGA1P56199 1179 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 PERM1Q5SV97 790 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 C15orf52Q6ZUT6 534 aaKnown RBP11.48□□□□□ -0.57
USP53-201ENST00000274030 GSTCDQ8NEC7 633 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 RERGQ96A58 199 aaPredicted RBP11.48□□□□□ -0.57
USP53-201ENST00000274030 AARSD1Q9BTE6 412 aaKnown RBP11.48□□□□□ -0.57
USP53-201ENST00000274030 TTPALQ9BTX7 342 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 CRISPLD1Q9H336 500 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 GLOD4Q9HC38 313 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 CHRAC1Q9NRG0 131 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 MSRAQ9UJ68 235 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 KPNA5O15131 536 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 MFSD11O43934 449 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 HOXC6P09630 235 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 EPS8Q12929 822 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 ITGA7Q13683 1181 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 UBE2R2Q712K3 238 aaPredicted RBP11.48□□□□□ -0.57
USP53-201ENST00000274030 TRABD2AQ86V40 505 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 TOP6BLQ8N6T0 577 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 OR7A2PQ8NGA2 310 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 ANGPT4Q9Y264 503 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 SLC28A1O00337 649 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 TNFRSF21O75509 655 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 C2P06681 752 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 NUDT17P0C025 328 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 MMP8P22894 467 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 ADSLP30566 484 aaPredicted RBP11.48□□□□□ -0.57
USP53-201ENST00000274030 DRG2P55039 364 aaKnown RBP11.48□□□□□ -0.57
USP53-201ENST00000274030 SRSF11Q05519 484 aaKnown RBP11.48□□□□□ -0.57
USP53-201ENST00000274030 TUSC3Q13454 348 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 LPIN1Q14693 890 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 BMT2Q1RMZ1 405 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 KLHL12Q53G59 568 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 PPM1JQ5JR12 505 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 GK5Q6ZS86 529 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 DHDDSQ86SQ9 333 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 C4orf32Q8N8J7 132 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 ACMSDQ8TDX5 336 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 CLEC4MQ9H2X3 399 aaPredicted RBP11.48□□□□□ -0.57
USP53-201ENST00000274030 ELL3Q9HB65 397 aaPredicted RBP11.48□□□□□ -0.57
USP53-201ENST00000274030 PTGFRNQ9P2B2 879 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 GSTK1Q9Y2Q3 226 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 TRAF6Q9Y4K3 522 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 CASZ1Q86V15 1759 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 PNMA8CA0A1B0GUJ8 204 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 PLSCR1O15162 318 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 C1RP00736 705 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 FGF1P05230 155 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 UGT2B4P06133 528 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 NDUFV1P49821 464 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 QPCTQ16769 361 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms