RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 BBS2Q9BXC9 721 aa15.41■□□□□ 0.06
COPS3-201ENST00000268717 SLC13A1Q9BZW2 595 aa15.41■□□□□ 0.06
COPS3-201ENST00000268717 NLE1Q9NVX2 485 aaPredicted RBP15.41■□□□□ 0.06
COPS3-201ENST00000268717 CORO1CQ9ULV4 474 aaPredicted RBP15.41■□□□□ 0.06
COPS3-201ENST00000268717 ANKRD6Q9Y2G4 727 aa15.41■□□□□ 0.06
COPS3-201ENST00000268717 MTO1Q9Y2Z2 717 aaKnown RBP15.41■□□□□ 0.06
COPS3-201ENST00000268717 FCF1Q9Y324 198 aaKnown RBP15.41■□□□□ 0.06
COPS3-201ENST00000268717 STARD13Q9Y3M8 1113 aa15.41■□□□□ 0.06
COPS3-201ENST00000268717 ATXN2Q99700 1313 aaKnown RBP15.41■□□□□ 0.06
COPS3-201ENST00000268717 CCDC78A2IDD5 438 aa15.4■□□□□ 0.06
COPS3-201ENST00000268717 TMEM221A6NGB7 291 aa15.4■□□□□ 0.06
COPS3-201ENST00000268717 C2orf81A6NN90 581 aa15.4■□□□□ 0.06
COPS3-201ENST00000268717 ANHXE9PGG2 379 aa15.4■□□□□ 0.06
COPS3-201ENST00000268717 M0R296 226 aa15.4■□□□□ 0.06
COPS3-201ENST00000268717 HTRA2O43464 458 aaPredicted RBP15.4■□□□□ 0.06
COPS3-201ENST00000268717 SNX3O60493 162 aa15.4■□□□□ 0.06
COPS3-201ENST00000268717 IGSF6O95976 241 aa15.4■□□□□ 0.06
COPS3-201ENST00000268717 MT-CO1P00395 513 aa15.4■□□□□ 0.06
COPS3-201ENST00000268717 COL6A2P12110 1019 aa15.4■□□□□ 0.06
COPS3-201ENST00000268717 GABRB3P28472 473 aa15.4■□□□□ 0.06
COPS3-201ENST00000268717 VASPP50552 380 aaPredicted RBP15.4■□□□□ 0.06
COPS3-201ENST00000268717 CLCN5P51795 746 aa15.4■□□□□ 0.06
COPS3-201ENST00000268717 TDGQ13569 410 aa15.4■□□□□ 0.06
COPS3-201ENST00000268717 HTR4Q13639 388 aa15.4■□□□□ 0.06
COPS3-201ENST00000268717 ITIH4Q14624 930 aa15.4■□□□□ 0.06
COPS3-201ENST00000268717 CCDC153Q494R4 210 aa15.4■□□□□ 0.06
COPS3-201ENST00000268717 CILP2Q8IUL8 1156 aa15.4■□□□□ 0.06
COPS3-201ENST00000268717 ADGRG2Q8IZP9 1017 aa15.4■□□□□ 0.06
COPS3-201ENST00000268717 CCDC197Q8NCU1 140 aa15.4■□□□□ 0.06
COPS3-201ENST00000268717 ING5Q8WYH8 240 aa15.4■□□□□ 0.06
COPS3-201ENST00000268717 ASIC4Q96FT7 647 aa15.4■□□□□ 0.06
COPS3-201ENST00000268717 PLCD4Q9BRC7 762 aa15.4■□□□□ 0.06
COPS3-201ENST00000268717 FGFR1OP2Q9NVK5 253 aa15.4■□□□□ 0.06
COPS3-201ENST00000268717 OBP2AQ9NY56 170 aa15.4■□□□□ 0.06
COPS3-201ENST00000268717 SIRPGQ9P1W8 387 aa15.4■□□□□ 0.06
COPS3-201ENST00000268717 NEDD8-MDP1E9PL57 170 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 GOLGA8TH3BQL2 631 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 EDF1O60869 148 aaKnown RBP15.39■□□□□ 0.05
COPS3-201ENST00000268717 GSRP00390 522 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 PABPC1P11940 636 aaKnown RBP15.39■□□□□ 0.05
COPS3-201ENST00000268717 TYRP14679 529 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 OGNP20774 298 aaKnown RBP15.39■□□□□ 0.05
COPS3-201ENST00000268717 CRABP2P29373 138 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 POU4F1Q01851 419 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 GRM3Q14832 879 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 ZKSCAN8Q15776 578 aaPredicted RBP15.39■□□□□ 0.05
COPS3-201ENST00000268717 FUT11Q495W5 492 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 MRNIPQ6NTE8 343 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 GLT6D1Q7Z4J2 308 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 DENND6AQ8IWF6 608 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 PLPP6Q8IY26 295 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 PCDH20Q8N6Y1 951 aaKnown RBP15.39■□□□□ 0.05
COPS3-201ENST00000268717 ANKS4BQ8N8V4 417 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 LPCAT1Q8NF37 534 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 OR2AP1Q8NGE2 309 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 HDAC10Q969S8 669 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 TUBGCP5Q96RT8 1024 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 PITPNM3Q9BZ71 974 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 MANSC1Q9H8J5 431 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 TRPV4Q9HBA0 871 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 GDE1Q9NZC3 331 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 SLC25A13Q9UJS0 675 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 FBXO10Q9UK96 956 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 DUSP12Q9UNI6 340 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 PCDHGC4Q9Y5F7 938 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 ARL5AQ9Y689 179 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 NUMBLQ9Y6R0 609 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 MYOFQ9NZM1 2061 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 TRAFD1O14545 582 aaPredicted RBP15.39■□□□□ 0.05
COPS3-201ENST00000268717 HOXC11O43248 304 aaPredicted RBP15.39■□□□□ 0.05
COPS3-201ENST00000268717 SMAD6O43541 496 aaKnown RBP15.39■□□□□ 0.05
COPS3-201ENST00000268717 PLIN3O60664 434 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 ZNF821O75541 412 aaPredicted RBP15.39■□□□□ 0.05
COPS3-201ENST00000268717 PGLSO95336 258 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 SRCP12931 536 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 ARSDP51689 593 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 SNRPD1P62314 119 aaKnown RBP15.39■□□□□ 0.05
COPS3-201ENST00000268717 CTBP1Q13363 440 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 TAF1BQ53T94 588 aaPredicted RBP15.39■□□□□ 0.05
COPS3-201ENST00000268717 LY6G5CQ5SRR4 150 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 ARMC12Q5T9G4 340 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 AFTPHQ6ULP2 937 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 PARM1Q6UWI2 310 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 BMP8AQ7Z5Y6 402 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 AHI1Q8N157 1196 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 OSCP1Q8WVF1 389 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 FGF14Q92915 247 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 MYO19Q96H55 970 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 DNAJC1Q96KC8 554 aaKnown RBP15.39■□□□□ 0.05
COPS3-201ENST00000268717 ATP13A3Q9H7F0 1226 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 MAGEE1Q9HCI5 957 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 MID2Q9UJV3 735 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 SPO11Q9Y5K1 396 aa15.39■□□□□ 0.05
COPS3-201ENST00000268717 A0A096LPK6 155 aa15.38■□□□□ 0.05
COPS3-201ENST00000268717 FAM95CA0A1B0GW59 222 aa15.38■□□□□ 0.05
COPS3-201ENST00000268717 H7C0S8 307 aa15.38■□□□□ 0.05
COPS3-201ENST00000268717 K7ERQ8 282 aa15.38■□□□□ 0.05
COPS3-201ENST00000268717 C2P06681 752 aa15.38■□□□□ 0.05
COPS3-201ENST00000268717 APOA4P06727 396 aa15.38■□□□□ 0.05
COPS3-201ENST00000268717 BPGMP07738 259 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms