RNA–Protein interactions for RNA: ENST00000267484.9

RTN1-201, Transcript of reticulon 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RTN1, Length 3,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-201ENST00000267484 OR2T3Q8NH03 318 aa16.95■□□□□ 0.3
RTN1-201ENST00000267484 PTERQ96BW5 349 aa16.95■□□□□ 0.3
RTN1-201ENST00000267484 C19orf60Q96EN9 201 aa16.95■□□□□ 0.3
RTN1-201ENST00000267484 FCRL2Q96LA5 508 aaPredicted RBP16.95■□□□□ 0.3
RTN1-201ENST00000267484 CLK4Q9HAZ1 481 aaKnown RBP16.95■□□□□ 0.3
RTN1-201ENST00000267484 BTRCQ9Y297 605 aa16.95■□□□□ 0.3
RTN1-201ENST00000267484 MTHFD1P11586 935 aaKnown RBP16.95■□□□□ 0.3
RTN1-201ENST00000267484 PAMP19021 973 aa16.95■□□□□ 0.3
RTN1-201ENST00000267484 CAPN3P20807 821 aa16.95■□□□□ 0.3
RTN1-201ENST00000267484 GEMP55040 296 aa16.95■□□□□ 0.3
RTN1-201ENST00000267484 IHHQ14623 411 aa16.95■□□□□ 0.3
RTN1-201ENST00000267484 CHST15Q7LFX5 561 aaPredicted RBP16.95■□□□□ 0.3
RTN1-201ENST00000267484 IPO11Q9UI26 975 aaKnown RBP16.95■□□□□ 0.3
RTN1-201ENST00000267484 A0A1B0GTL3 188 aa16.94■□□□□ 0.3
RTN1-201ENST00000267484 SMIM35A0A1B0GVV1 85 aa16.94■□□□□ 0.3
RTN1-201ENST00000267484 MATN3O15232 486 aa16.94■□□□□ 0.3
RTN1-201ENST00000267484 MAPK10P53779 464 aa16.94■□□□□ 0.3
RTN1-201ENST00000267484 BEX3Q00994 111 aa16.94■□□□□ 0.3
RTN1-201ENST00000267484 CACNB2Q08289 660 aaPredicted RBP16.94■□□□□ 0.3
RTN1-201ENST00000267484 TRAP1Q12931 704 aaKnown RBP16.94■□□□□ 0.3
RTN1-201ENST00000267484 KIAA0930Q6ICG6 404 aaPredicted RBP16.94■□□□□ 0.3
RTN1-201ENST00000267484 ERI1Q8IV48 349 aaKnown RBP16.94■□□□□ 0.3
RTN1-201ENST00000267484 CYGBQ8WWM9 190 aa16.94■□□□□ 0.3
RTN1-201ENST00000267484 TFAP2CQ92754 450 aa16.94■□□□□ 0.3
RTN1-201ENST00000267484 ANKRD60Q9BZ19 345 aa16.94■□□□□ 0.3
RTN1-201ENST00000267484 UPF3AQ9H1J1 476 aaKnown RBP16.94■□□□□ 0.3
RTN1-201ENST00000267484 PIF1Q9H611 641 aa16.94■□□□□ 0.3
RTN1-201ENST00000267484 NT5MQ9NPB1 228 aa16.94■□□□□ 0.3
RTN1-201ENST00000267484 THEGQ9P2T0 379 aa16.94■□□□□ 0.3
RTN1-201ENST00000267484 PSMD3O43242 534 aa16.94■□□□□ 0.3
RTN1-201ENST00000267484 TFPTP0C1Z6 253 aa16.94■□□□□ 0.3
RTN1-201ENST00000267484 ECT2LQ008S8 904 aa16.94■□□□□ 0.3
RTN1-201ENST00000267484 ANKDD1AQ495B1 522 aa16.94■□□□□ 0.3
RTN1-201ENST00000267484 UNC50Q53HI1 259 aa16.94■□□□□ 0.3
RTN1-201ENST00000267484 TTC33Q6PID6 262 aaPredicted RBP16.94■□□□□ 0.3
RTN1-201ENST00000267484 DDIASQ8IXT1 998 aa16.94■□□□□ 0.3
RTN1-201ENST00000267484 AFAP1L2Q8N4X5 818 aa16.94■□□□□ 0.3
RTN1-201ENST00000267484 EFHD1Q9BUP0 239 aa16.94■□□□□ 0.3
RTN1-201ENST00000267484 ENTPD7Q9NQZ7 604 aa16.94■□□□□ 0.3
RTN1-201ENST00000267484 RRN3Q9NYV6 651 aa16.94■□□□□ 0.3
RTN1-201ENST00000267484 DNAJC15Q9Y5T4 150 aa16.94■□□□□ 0.3
RTN1-201ENST00000267484 RNF103-CHMP3A0A140T963 221 aa16.93■□□□□ 0.3
RTN1-201ENST00000267484 AP3B1O00203 1094 aa16.93■□□□□ 0.3
RTN1-201ENST00000267484 NCK1P16333 377 aa16.93■□□□□ 0.3
RTN1-201ENST00000267484 GPX3P22352 226 aa16.93■□□□□ 0.3
RTN1-201ENST00000267484 CD86P42081 329 aa16.93■□□□□ 0.3
RTN1-201ENST00000267484 KPNA2P52292 529 aaKnown RBP16.93■□□□□ 0.3
RTN1-201ENST00000267484 STX1BP61266 288 aa16.93■□□□□ 0.3
RTN1-201ENST00000267484 ADRM1Q16186 407 aa16.93■□□□□ 0.3
RTN1-201ENST00000267484 ERMP1Q7Z2K6 904 aa16.93■□□□□ 0.3
RTN1-201ENST00000267484 OR13J1Q8NGT2 312 aa16.93■□□□□ 0.3
RTN1-201ENST00000267484 HDAC10Q969S8 669 aa16.93■□□□□ 0.3
RTN1-201ENST00000267484 SMARCD1Q96GM5 515 aa16.93■□□□□ 0.3
RTN1-201ENST00000267484 MAML3Q96JK9 1138 aa16.93■□□□□ 0.3
RTN1-201ENST00000267484 TCF12Q99081 682 aa16.93■□□□□ 0.3
RTN1-201ENST00000267484 VWA7Q9Y334 891 aa16.93■□□□□ 0.3
RTN1-201ENST00000267484 YAP1P46937 504 aaKnown RBP16.93■□□□□ 0.3
RTN1-201ENST00000267484 ZNF678Q5SXM1 525 aa16.93■□□□□ 0.3
RTN1-201ENST00000267484 PPP4R4Q6NUP7 873 aa16.93■□□□□ 0.3
RTN1-201ENST00000267484 ISCA2Q86U28 154 aa16.93■□□□□ 0.3
RTN1-201ENST00000267484 FAF1Q9UNN5 650 aaPredicted RBP16.93■□□□□ 0.3
RTN1-201ENST00000267484 PIP5K1BO14986 540 aa16.93■□□□□ 0.3
RTN1-201ENST00000267484 TIGD5Q53EQ6 642 aa16.93■□□□□ 0.3
RTN1-201ENST00000267484 C8orf82Q6P1X6 216 aaPredicted RBP16.93■□□□□ 0.3
RTN1-201ENST00000267484 ZNF354CQ86Y25 554 aa16.93■□□□□ 0.3
RTN1-201ENST00000267484 SLC15A3Q8IY34 581 aa16.93■□□□□ 0.3
RTN1-201ENST00000267484 NPLOC4Q8TAT6 608 aa16.93■□□□□ 0.3
RTN1-201ENST00000267484 CASP10Q92851 521 aa16.93■□□□□ 0.3
RTN1-201ENST00000267484 FAR2Q96K12 515 aa16.93■□□□□ 0.3
RTN1-201ENST00000267484 UHRF1Q96T88 793 aaPredicted RBP16.93■□□□□ 0.3
RTN1-201ENST00000267484 MID1IP1Q9NPA3 183 aa16.93■□□□□ 0.3
RTN1-201ENST00000267484 MRPL40Q9NQ50 206 aaKnown RBP16.93■□□□□ 0.3
RTN1-201ENST00000267484 OAZ3Q9UMX2 235 aa16.93■□□□□ 0.3
RTN1-201ENST00000267484 USP22Q9UPT9 525 aa16.93■□□□□ 0.3
RTN1-201ENST00000267484 J3KR12 359 aa16.92■□□□□ 0.3
RTN1-201ENST00000267484 LINC00032P0C843 101 aa16.92■□□□□ 0.3
RTN1-201ENST00000267484 BRCC3P46736 316 aa16.92■□□□□ 0.3
RTN1-201ENST00000267484 SCNN1GP51170 649 aa16.92■□□□□ 0.3
RTN1-201ENST00000267484 DSC2Q02487 901 aa16.92■□□□□ 0.3
RTN1-201ENST00000267484 MFSD10Q14728 455 aa16.92■□□□□ 0.3
RTN1-201ENST00000267484 C16orf72Q14CZ0 275 aa16.92■□□□□ 0.3
RTN1-201ENST00000267484 PSMD5Q16401 504 aa16.92■□□□□ 0.3
RTN1-201ENST00000267484 FAM45BPQ6NSW5 357 aa16.92■□□□□ 0.3
RTN1-201ENST00000267484 CMTR2Q8IYT2 770 aaKnown RBP16.92■□□□□ 0.3
RTN1-201ENST00000267484 FAM45AQ8TCE6 357 aa16.92■□□□□ 0.3
RTN1-201ENST00000267484 TOP1MTQ969P6 601 aa16.92■□□□□ 0.3
RTN1-201ENST00000267484 PABPC5Q96DU9 382 aaKnown RBP16.92■□□□□ 0.3
RTN1-201ENST00000267484 UBXN10Q96LJ8 280 aa16.92■□□□□ 0.3
RTN1-201ENST00000267484 RTP3Q9BQQ7 232 aa16.92■□□□□ 0.3
RTN1-201ENST00000267484 CMTM6Q9NX76 183 aa16.92■□□□□ 0.3
RTN1-201ENST00000267484 DHRS12A0PJE2 317 aa16.92■□□□□ 0.3
RTN1-201ENST00000267484 H3BMM5 538 aa16.92■□□□□ 0.3
RTN1-201ENST00000267484 UBXN8O00124 270 aa16.92■□□□□ 0.3
RTN1-201ENST00000267484 STAMBPO95630 424 aa16.92■□□□□ 0.3
RTN1-201ENST00000267484 PIRTP0C851 137 aa16.92■□□□□ 0.3
RTN1-201ENST00000267484 IMPDH1P20839 514 aa16.92■□□□□ 0.3
RTN1-201ENST00000267484 UGT3A2Q3SY77 523 aa16.92■□□□□ 0.3
RTN1-201ENST00000267484 FUT11Q495W5 492 aa16.92■□□□□ 0.3
RTN1-201ENST00000267484 GPR141Q7Z602 305 aa16.92■□□□□ 0.3
RTN1-201ENST00000267484 PTGR2Q8N8N7 351 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms