RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 MOSPD1Q9UJG1 213 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 LEF1Q9UJU2 399 aaPredicted RBP11.59□□□□□ -0.55
VPS33A-201ENST00000267199 IPPQ9Y573 584 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 GMPPBQ9Y5P6 360 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 PNMA8CA0A1B0GUJ8 204 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 FFAR3O14843 346 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 GPR42O15529 346 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 CYP2C18P33260 490 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 BLVRAP53004 296 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 RAB14P61106 215 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 BNIP2Q12982 314 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 TTC23LQ6PF05 361 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 CXCL17Q6UXB2 119 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 OTOP3Q7RTS5 596 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 IGDCC3Q8IVU1 814 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 FLCNQ8NFG4 579 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 MCFD2Q8NI22 146 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 ENKURQ8TC29 256 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 RAET1EQ8TD07 263 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 SKA1Q96BD8 255 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 MTFMTQ96DP5 389 aaKnown RBP11.59□□□□□ -0.55
VPS33A-201ENST00000267199 ABCG8Q9H221 673 aa11.59□□□□□ -0.55
VPS33A-201ENST00000267199 PKD1L3Q7Z443 1732 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 NWD2Q9ULI1 1742 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 EFCAB10A6NFE3 127 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 AZIN1O14977 448 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 FOXD2O60548 495 aaPredicted RBP11.58□□□□□ -0.56
VPS33A-201ENST00000267199 CYBBP04839 570 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 UGT1A6P19224 532 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 UGT1A1P22309 533 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 UGT1A4P22310 534 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 IL12AP29459 219 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 UGT1A3P35503 534 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 UGT1A5P35504 534 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 GJA8P48165 433 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 SLC25A11Q02978 314 aaKnown RBP11.58□□□□□ -0.56
VPS33A-201ENST00000267199 SIM2Q14190 667 aaPredicted RBP11.58□□□□□ -0.56
VPS33A-201ENST00000267199 KRT33BQ14525 404 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 TTLL9Q3SXZ7 439 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 C6orf183Q5T699 404 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 ZNF280DQ6N043 979 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 TAS1R3Q7RTX0 852 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 AHI1Q8N157 1196 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 AMER2Q8N7J2 671 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 TAMM41Q96BW9 452 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 ADAM2Q99965 735 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 SLC39A3Q9BRY0 314 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 COLEC11Q9BWP8 271 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 UNC93B1Q9H1C4 597 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 SMPD3Q9NY59 655 aaPredicted RBP11.58□□□□□ -0.56
VPS33A-201ENST00000267199 RCOR3Q9P2K3 495 aaPredicted RBP11.58□□□□□ -0.56
VPS33A-201ENST00000267199 PCDHB5Q9Y5E4 795 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 TRPM3Q9HCF6 1732 aaPredicted RBP11.58□□□□□ -0.56
VPS33A-201ENST00000267199 NEMP2A6NFY4 417 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 FGF10O15520 208 aaPredicted RBP11.58□□□□□ -0.56
VPS33A-201ENST00000267199 USP2O75604 605 aaPredicted RBP11.58□□□□□ -0.56
VPS33A-201ENST00000267199 DARSP14868 501 aaKnown RBP11.58□□□□□ -0.56
VPS33A-201ENST00000267199 MPP1Q00013 466 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 MADCAM1Q13477 382 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 SIX1Q15475 284 aaPredicted RBP11.58□□□□□ -0.56
VPS33A-201ENST00000267199 PAOXQ6QHF9 649 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 CDHR3Q6ZTQ4 885 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 LUZP2Q86TE4 346 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 HIPK1Q86Z02 1210 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 PPTC7Q8NI37 304 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 SEPT8Q92599 483 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 UTP4Q969X6 686 aaKnown RBP11.58□□□□□ -0.56
VPS33A-201ENST00000267199 C12orf42Q96LP6 360 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 TEKT5Q96M29 485 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 PDGFDQ9GZP0 370 aaPredicted RBP11.58□□□□□ -0.56
VPS33A-201ENST00000267199 MPP6Q9NZW5 540 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 KLHL3Q9UH77 587 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 CIDEBQ9UHD4 219 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 NTRK1P04629 796 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 LMO2P25791 158 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 MZF1P28698 734 aaPredicted RBP11.58□□□□□ -0.56
VPS33A-201ENST00000267199 RPS9P46781 194 aaKnown RBP11.58□□□□□ -0.56
VPS33A-201ENST00000267199 LIMK2P53671 638 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 SLC16A1P53985 500 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 WNT3AP56704 352 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 ZNF621Q6ZSS3 439 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 LDB1Q86U70 411 aaPredicted RBP11.58□□□□□ -0.56
VPS33A-201ENST00000267199 CNTD1Q8N815 330 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 EPB41L4BQ9H329 900 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 ATP13A1Q9HD20 1204 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 RASSF1Q9NS23 344 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 TRMT13Q9NUP7 481 aaKnown RBP11.58□□□□□ -0.56
VPS33A-201ENST00000267199 LMCD1Q9NZU5 365 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 VPS28Q9UK41 221 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 TRPV2Q9Y5S1 764 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 MYH1P12882 1939 aa11.58□□□□□ -0.56
VPS33A-201ENST00000267199 BOLA2-SMG1P6H3BVE0 249 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 YWHAQP27348 245 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 HALP42357 657 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 NDUFV1P49821 464 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 CLCN5P51795 746 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 IRF9Q00978 393 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 PRKG2Q13237 762 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 CCDC149Q6ZUS6 474 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 GALNT5Q7Z7M9 940 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms